vOTU vOTU-021017

vOTU: vOTU-021017

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-021017
Number of genomes	6
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02 → F23-B02 sp001916715
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-01175 → vGENUS-01134 → vOTU-021017
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02 → F23-B02 sp002472405
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1405888
Biosample ID	SAMEA3664991
Genome length (bp)	37,319 bps
CheckV completeness	86.04% (Medium-quality)
CDS count	61
CDS density	91.57%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02 → F23-B02 sp002472405	Total connections	24	Host agreement	70.83
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02 → F23-B02 sp001916715	Total connections	13	Host agreement	84.62

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 86.04)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1405888_1	phrog_27197	61.0	2.3e-17	N/A	unknown function
eggNOG-mapper	UHGV-1405888_1	886882.PPSC2_p0363	95.1	1.01e-20	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1405888_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-1405888_1	NF007410	N/A	N/A	N/A	N/A
KOfam	UHGV-1405888_2	K01449	54.8	0.0000000000000017	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1405888_2	phrog_30550	141.1	4.60046e-42	N/A	unknown function
UniRef90	UHGV-1405888_2	UniRef90_A0A6N9PX25	120.0	3.18e-31	Cell wall hydrolase	N/A
eggNOG-mapper	UHGV-1405888_2	1519439.JPJG01000077_gene920	101.0	2.53e-25	Cell Wall Hydrolase	N/A
Pfam	UHGV-1405888_2	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
structural_annotation	UHGV-1405888_2	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
PHROG	UHGV-1405888_3	phrog_757	47.9	0.00000000000018	DNA methyltransferase	other
UniRef90	UHGV-1405888_3	UniRef90_A0A7J2R6L5	71.6	0.00000000000000122	DNA cytosine methyltransferase (Fragment)	N/A
eggNOG-mapper	UHGV-1405888_3	748224.HMPREF9436_03069	100.0	5.06e-26	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1405888_3	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-1405888_4	phrog_757	165.9	0	DNA methyltransferase	other
UniRef90	UHGV-1405888_4	UniRef90_A0A516LQR9	181.0	0	Putative DNA (Cytosine-5)-methyltransferase	N/A
eggNOG-mapper	UHGV-1405888_4	1327982.R9ZYM1_9CAUD	229.0	0	N/A	N/A
UniRef90	UHGV-1405888_5	UniRef90_A0A845MZZ9	75.5	0.00000000000000246	N/A	N/A
Pfam	UHGV-1405888_5	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-1405888_12	phrog_10714	51.1	0.000000000000023	N/A	unknown function
structural_annotation	UHGV-1405888_12	PF15188	N/A	N/A	N/A	N/A
PHROG	UHGV-1405888_16	phrog_18716	141.3	2.40042e-42	N/A	unknown function
UniRef90	UHGV-1405888_16	UniRef90_A0A1J0GJP7	144.0	3.05063e-42	N/A	N/A
eggNOG-mapper	UHGV-1405888_16	665959.HMPREF1013_00856	114.0	1.79e-31	N/A	N/A
Pfam	UHGV-1405888_16	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-1405888_16	PF18909	N/A	N/A	N/A	N/A
PHROG	UHGV-1405888_19	phrog_2872	220.8	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1405888_19	UniRef90_A0A8J6P193	273.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1405888_19	1232453.BAIF02000010_gene3337	219.0	0	AAA domain	N/A
Pfam	UHGV-1405888_19	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1405888_19	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-1405888_21	phrog_18107	70.6	2.7e-20	N/A	unknown function
eggNOG-mapper	UHGV-1405888_21	476272.RUMHYD_02831	170.0	0	N/A	N/A
structural_annotation	UHGV-1405888_21	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-1405888_22	phrog_3490	113.1	2.3e-33	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1405888_22	UniRef90_R6N0P8	215.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1405888_22	1304866.K413DRAFT_0825	169.0	0	resolution of meiotic recombination intermediates	N/A
Pfam	UHGV-1405888_22	PF02732	N/A	N/A	ERCC4 domain	ERCC4
COG	UHGV-1405888_22	COG1948	N/A	N/A	ERCC4-type crossover junction endonuclease	N/A
structural_annotation	UHGV-1405888_22	PF02732,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-1405888_23	K02316	66.6	3.8e-19	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1405888_23	phrog_11992	108.6	7e-32	N/A	unknown function
UniRef90	UHGV-1405888_23	UniRef90_E6UHJ4	101.0	1.02e-23	DNA primase	N/A
eggNOG-mapper	UHGV-1405888_23	697329.Rumal_0697	101.0	1.71e-24	CHC2 zinc finger domain protein	N/A
PADLOC	UHGV-1405888_23	drt-cluster192	50.1	0.000000000000064	DRT	DRT
Pfam	UHGV-1405888_23	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-1405888_23	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-1405888_23	PF01807,PF00401	N/A	N/A	N/A	N/A
PHROG	UHGV-1405888_24	phrog_256	324.4	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1405888_24	UniRef90_A0A1V5XFC1	565.0	0	Virulence-associated protein E	N/A
eggNOG-mapper	UHGV-1405888_24	1235793.C809_02292	243.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-1405888_24	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-1405888_24	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-1405888_24	PF05272,MF_00016,NF005477,COG5545	N/A	N/A	N/A	N/A
PHROG	UHGV-1405888_27	phrog_606	40.5	0.000000000019	terminase small subunit	head and packaging
UniRef90	UHGV-1405888_27	UniRef90_UPI001D08D6B6	261.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1405888_27	1235802.C823_05975	68.6	0.0000000000103	N/A	N/A
Pfam	UHGV-1405888_27	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1405888_27	PF16677	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1405888_30	PF16857,MF_01553,NF010188,COG5503	N/A	N/A	N/A	N/A
KOfam	UHGV-1405888_31	K06400	207.7	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1405888_31	phrog_95	205.6	0	integrase	integration and excision
UniRef90	UHGV-1405888_31	UniRef90_A0A3D4G6V8	272.0	0	Resolvase	N/A
eggNOG-mapper	UHGV-1405888_31	697329.Rumal_3466	234.0	0	resolvase	N/A
Pfam	UHGV-1405888_31	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1405888_31	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-1405888_31	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1405888_31	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-1405888_32	phrog_1233	76.6	3.8e-22	N/A	unknown function
UniRef90	UHGV-1405888_32	UniRef90_UPI001C39EFB9	116.0	3.39e-31	Dienelactone hydrolase family protein	N/A
eggNOG-mapper	UHGV-1405888_32	1232453.BAIF02000011_gene3355	103.0	8.42e-27	N/A	N/A
PHROG	UHGV-1405888_33	phrog_38	186.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-1405888_33	UniRef90_A0A810QA10	660.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1405888_33	1298920.KI911353_gene2682	472.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-1405888_33	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1405888_33	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1405888_33	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-1405888_34	phrog_64	212.7	0	portal protein	head and packaging
UniRef90	UHGV-1405888_34	UniRef90_UPI001C02F349	768.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1405888_34	1123263.AUKY01000015_gene1609	425.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1405888_34	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1405888_34	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1405888_36	phrog_1328	127.8	6.4e-38	major head protein	head and packaging
UniRef90	UHGV-1405888_36	UniRef90_UPI00164DD2D5	596.0	0	N/A	N/A
eggNOG-mapper	UHGV-1405888_36	665956.HMPREF1032_03619	238.0	0	N/A	N/A
Pfam	UHGV-1405888_36	PF17236	N/A	N/A	N/A	DUF5309
structural_annotation	UHGV-1405888_36	PF17236,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1405888_37	phrog_132	43.8	0.0000000000037	head-tail adaptor	connector
UniRef90	UHGV-1405888_37	UniRef90_UPI00164E20D5	155.0	0	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1405888_37	1298920.KI911353_gene2658	66.6	0.000000000000777	N/A	N/A
Pfam	UHGV-1405888_37	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1405888_37	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1405888_38	1121866.AUGK01000003_gene1432	77.8	1.24e-16	N/A	N/A
structural_annotation	UHGV-1405888_40	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-1405888_41	phrog_158	58.4	1.4e-16	major tail protein	tail
UniRef90	UHGV-1405888_41	UniRef90_UPI00164D954A	254.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1405888_41	1232453.BAIF02000058_gene1634	102.0	7.82e-26	N/A	N/A
Pfam	UHGV-1405888_41	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-1405888_41	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1405888_42	UniRef90_UPI00164D364F	207.0	0	N/A	N/A
eggNOG-mapper	UHGV-1405888_42	469596.HMPREF9488_01311	92.0	1.07e-22	N/A	N/A
Pfam	UHGV-1405888_42	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1405888_42	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1405888_43	1121333.JMLH01000047_gene1011	75.5	0.0000000000000018	N/A	N/A
PHROG	UHGV-1405888_44	phrog_1535	158.6	0	tail length tape measure protein	tail
UniRef90	UHGV-1405888_44	UniRef90_A0A1C6L0H4	411.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1405888_44	1121866.AUGK01000003_gene1437	343.0	0	phage tail tape measure protein	N/A
COG	UHGV-1405888_44	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
structural_annotation	UHGV-1405888_44	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1405888_45	phrog_1194	94.9	5.9e-28	N/A	unknown function
eggNOG-mapper	UHGV-1405888_45	742740.HMPREF9474_03515	137.0	3.59e-40	N/A	N/A
structural_annotation	UHGV-1405888_45	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1405888_46	phrog_13879	271.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1405888_46	665956.HMPREF1032_03630	212.0	0	N/A	N/A
structural_annotation	UHGV-1405888_46	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1405888_47	phrog_18725	50.7	2.4e-22	N/A	unknown function
eggNOG-mapper	UHGV-1405888_47	1226322.HMPREF1545_00062	110.0	7.11e-28	N/A	N/A
PHROG	UHGV-1405888_49	phrog_5302	118.7	3.2e-35	tail protein	tail
UniRef90	UHGV-1405888_49	UniRef90_UPI001EDFA717	118.0	6.31e-25	bacterial Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1405888_49	742740.HMPREF9474_02337	65.1	0.0000000233	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-1405888_49	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-1405888_49	PF14686,TIGR03000,COG1262	N/A	N/A	N/A	N/A
UniRef90	UHGV-1405888_51	UniRef90_R6I1X1	189.0	0	COPII coat assembly protein SEC16 (Protein transport protein SEC16)	N/A
eggNOG-mapper	UHGV-1405888_51	552398.HMPREF0866_01159	105.0	7.36e-27	N/A	N/A
PHROG	UHGV-1405888_52	phrog_21357	57.5	1.5e-16	endolysin	lysis
UniRef90	UHGV-1405888_52	UniRef90_UPI001BB47323	85.1	1.81e-16	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-1405888_52	1007096.BAGW01000022_gene2648	74.3	0.000000000000331	CHAP domain	N/A
Pfam	UHGV-1405888_52	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-1405888_52	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1405888_52	TIGR02594,COG3738	N/A	N/A	N/A	N/A
PHROG	UHGV-1405888_53	phrog_1863	70.1	1.7e-20	N/A	unknown function
eggNOG-mapper	UHGV-1405888_53	748224.HMPREF9436_01412	95.5	6.73e-25	N/A	N/A
PHROG	UHGV-1405888_54	phrog_10091	111.2	6.6e-33	holin	lysis
UniRef90	UHGV-1405888_54	UniRef90_A0A1Y4RHF4	130.0	1.07e-37	Phage holin	N/A
eggNOG-mapper	UHGV-1405888_54	445975.COLSTE_02144	115.0	1.58e-32	Bacteriophage holin	N/A
Pfam	UHGV-1405888_54	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1405888_54	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1405888_54	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1405888_54	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-1405888_57	phrog_22984	44.5	0.0000000000027	N/A	unknown function
PHROG	UHGV-1405888_58	phrog_16490	68.3	1.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-1405888_58	476272.RUMHYD_01770	80.9	4.25e-16	N/A	N/A
structural_annotation	UHGV-1405888_59	PF18573,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-1405888_60	UniRef90_A0A7M1RTM1	72.0	0.00000000000144	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1405888_60	1378168.N510_03079	74.7	0.0000000000000629	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1405888	Yes	37,319	48	86	1
UHGV-1484728	No	26,612	48	61	1
UHGV-0238031	No	26,401	48	61	1
UHGV-1655465	No	17,000	48	39	1
UHGV-0057032	No	16,857	49	39	1
UHGV-1656756	No	16,857	49	39	1