vOTU vOTU-021186

vOTU: vOTU-021186

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-021186
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00116 → vGENUS-00624 → vOTU-021186
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus
Host range breadth	Genus
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-1463710
Biosample ID	SAMEA2737885
Genome length (bp)	20,684 bps
CheckV completeness	62.21% (Medium-quality)
CDS count	29
CDS density	94.13%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	57	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus oralis_S	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 62.21)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1463710_1	phrog_7626	49.8	0.000000000000055	N/A	unknown function
PHROG	UHGV-1463710_2	phrog_36	77.7	1.7e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-1463710_2	UniRef90_E6KKC4	256.0	0	Phage transcriptional regulator, RinA family	N/A
eggNOG-mapper	UHGV-1463710_2	1123315.AUIP01000003_gene229	88.2	1.53e-20	Transcriptional regulator, RinA family	N/A
NCBIFam	UHGV-1463710_2	TIGR01636.1	N/A	N/A	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-1463710_2	PF05263,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-1463710_3	K04763	81.9	9.1e-24	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1463710_3	phrog_216	142.0	2.79979e-42	integrase	integration and excision
UniRef90	UHGV-1463710_3	UniRef90_A0A3L9DNH3	343.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-1463710_3	1123314.AUIO01000016_gene835	316.0	0	Integrase	N/A
Pfam	UHGV-1463710_3	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1463710_3	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1463710_3	PF00589,MF_02055,NF007370,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-1463710_4	phrog_5627	142.7	3.69943e-43	N/A	unknown function
PHROG	UHGV-1463710_5	phrog_119	69.4	5e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1463710_5	UniRef90_A0A081R3F3	234.0	0	Prophage LambdaBa02, HNH endonuclease family protein	N/A
eggNOG-mapper	UHGV-1463710_5	644007.C5J957_9CAUD	226.0	0	endonuclease activity	N/A
PHROG	UHGV-1463710_6	phrog_361	153.9	0	terminase small subunit	head and packaging
UniRef90	UHGV-1463710_6	UniRef90_A0A414CIM9	234.0	0	POU-specific domain-containing protein	N/A
eggNOG-mapper	UHGV-1463710_6	1005705.HMPREF9967_1038	240.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-1463710_6	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-1463710_6	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1463710_6	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1463710_7	phrog_9	332.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1463710_7	UniRef90_A0A7G1JM49	1154.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1463710_7	1316408.HSISM1_1051	1157.0	0	Terminase	N/A
Pfam	UHGV-1463710_7	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1463710_7	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1463710_7	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1463710_7	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1463710_8	phrog_2955	121.5	1.8e-36	N/A	unknown function
UniRef90	UHGV-1463710_8	UniRef90_A0A062WVS8	119.0	7.22e-34	N/A	N/A
PHROG	UHGV-1463710_9	phrog_12	190.4	0	portal protein	head and packaging
UniRef90	UHGV-1463710_9	UniRef90_UPI001CBC02E6	721.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1463710_9	888049.HMPREF8578_0696	774.0	0	Phage portal protein	N/A
Pfam	UHGV-1463710_9	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1463710_9	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1463710_9	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1463710_9	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1463710_10	K06904	131.9	6e-39	N/A	N/A
PHROG	UHGV-1463710_10	phrog_80	167.1	0	head maturation protease	head and packaging
UniRef90	UHGV-1463710_10	UniRef90_E6KKD2	389.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-1463710_10	888049.HMPREF8578_0697	389.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-1463710_10	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1463710_10	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1463710_10	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1463710_10	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1463710_11	phrog_10	175.8	0	major head protein	head and packaging
UniRef90	UHGV-1463710_11	UniRef90_A0A139R8E2	648.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1463710_11	644007.C5J963_9CAUD	637.0	0	peptidase activity	N/A
Pfam	UHGV-1463710_11	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1463710_11	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1463710_11	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1463710_12	phrog_390	94.1	9.3e-28	Arc-like repressor	transcription regulation
UniRef90	UHGV-1463710_12	UniRef90_A0A0P0N6K2	88.2	8.72e-21	Phage transcriptional terminator	N/A
eggNOG-mapper	UHGV-1463710_12	1405498.SSIM_04855	49.3	0.00000231	Rho termination factor, N-terminal domain	N/A
PHROG	UHGV-1463710_13	phrog_2550	139.5	3.89981e-42	N/A	unknown function
UniRef90	UHGV-1463710_13	UniRef90_A0A081R3E6	179.0	0	Prophage pi2 protein 35	N/A
eggNOG-mapper	UHGV-1463710_13	888049.HMPREF8578_0700	180.0	0	N/A	N/A
Pfam	UHGV-1463710_13	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1463710_13	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1463710_14	phrog_1951	137.7	2.20004e-41	head-tail adaptor	connector
UniRef90	UHGV-1463710_14	UniRef90_UPI000B58A5F0	184.0	0	phage head closure protein	N/A
eggNOG-mapper	UHGV-1463710_14	644007.C5J966_9CAUD	192.0	0	N/A	N/A
NCBIFam	UHGV-1463710_14	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-1463710_14	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1463710_15	phrog_5	46.1	0.0000000000013	tail completion or Neck1 protein	connector
UniRef90	UHGV-1463710_15	UniRef90_A0A098ANM6	199.0	0	Bacteriophage pi2 protein 37	N/A
eggNOG-mapper	UHGV-1463710_15	644007.C5J967_9CAUD	199.0	0	exonuclease activity	N/A
Pfam	UHGV-1463710_15	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1463710_15	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1463710_16	phrog_78	51.3	0.000000000000022	tail terminator	connector
UniRef90	UHGV-1463710_16	UniRef90_T0U477	154.0	0	Prophage pi2 protein 38	N/A
eggNOG-mapper	UHGV-1463710_16	644007.C5J968_9CAUD	209.0	0	aminopeptidase activity	N/A
structural_annotation	UHGV-1463710_16	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1463710_17	phrog_88	162.3	0	major tail protein	tail
UniRef90	UHGV-1463710_17	UniRef90_E6KKD9	388.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1463710_17	888049.HMPREF8578_0704	388.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1463710_17	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1463710_17	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1463710_18	phrog_709	146.9	5.46506e-44	N/A	unknown function
UniRef90	UHGV-1463710_18	UniRef90_A0A0E4CSV4	179.0	0	Prophage pi2 protein 40	N/A
eggNOG-mapper	UHGV-1463710_18	644007.C5J970_9CAUD	272.0	0	N/A	N/A
structural_annotation	UHGV-1463710_18	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1463710_19	phrog_5755	402.9	0	tail length tape measure protein	tail
UniRef90	UHGV-1463710_19	UniRef90_F9Q552	1380.0	0	Phage tail tape measure protein, TP901 family	N/A
eggNOG-mapper	UHGV-1463710_19	644007.C5J971_9CAUD	1127.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-1463710_19	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1463710_19	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
structural_annotation	UHGV-1463710_19	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1463710_20	phrog_33	51.9	0.0000000000000033	distal tail protein Dit	tail
UniRef90	UHGV-1463710_20	UniRef90_A0A1F0TGE5	433.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1463710_20	888049.HMPREF8578_0707	455.0	0	N/A	N/A
structural_annotation	UHGV-1463710_20	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1463710_21	phrog_1210	644.6	0	PblB-type receptor binding	other
UniRef90	UHGV-1463710_21	UniRef90_A0A7L8ZLA3	1788.0	0	Endopeptidase	N/A
eggNOG-mapper	UHGV-1463710_21	888049.HMPREF8578_0708	1563.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1463710_21	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1463710_21	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-1463710_21	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1463710_21	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1463710_21	PF14594,PF00629,TIGR01665,TIGR04362,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1463710_22	phrog_12683	130.5	3.9e-39	N/A	unknown function
UniRef90	UHGV-1463710_22	UniRef90_A0A081R6K4	111.0	6.9e-31	ATP synthase F0 sector subunit C	N/A
eggNOG-mapper	UHGV-1463710_22	1000588.HMPREF9965_1688	123.0	2.15e-36	N/A	N/A
PHROG	UHGV-1463710_23	phrog_1554	271.8	0	N/A	unknown function
UniRef90	UHGV-1463710_23	UniRef90_A0A139Q9H9	284.0	0	N/A	N/A
eggNOG-mapper	UHGV-1463710_23	1035189.HMPREF9954_1920	301.0	0	N/A	N/A
structural_annotation	UHGV-1463710_23	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1463710_24	phrog_199	56.4	3.7e-16	holin	lysis
UniRef90	UHGV-1463710_24	UniRef90_A0A3R9KVL9	245.0	0	Holin family protein	N/A
eggNOG-mapper	UHGV-1463710_24	413066.A1EAB5_9CAUD	165.0	0	Pfam:Phage_holin_4_1	N/A
Pfam	UHGV-1463710_24	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1463710_24	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-1463710_24	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1463710_25	phrog_608	146.3	7.00649e-44	holin	lysis
UniRef90	UHGV-1463710_25	UniRef90_UPI001CBF2642	191.0	0	phage holin	N/A
eggNOG-mapper	UHGV-1463710_25	1000588.HMPREF9965_1685	195.0	0	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1463710_25	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
NCBIFam	UHGV-1463710_25	TIGR01673.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-1463710_25	PF09682,TIGR01673	N/A	N/A	N/A	N/A
KOfam	UHGV-1463710_26	K00689	44.2	0.0000000000003	E2.4.1.5; dextransucrase [EC:2.4.1.5]	N/A
PHROG	UHGV-1463710_26	phrog_1309	173.2	0	endolysin	lysis
UniRef90	UHGV-1463710_26	UniRef90_A0A1E1G7V3	464.0	0	Autolysin	N/A
eggNOG-mapper	UHGV-1463710_26	997830.HMPREF1124_0615	362.0	0	CHAP domain	N/A
Pfam	UHGV-1463710_26	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1463710_26	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1463710_26	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-1463710_26	PF19127,PF05257,TIGR04035,TIGR02594,COG5263	N/A	N/A	N/A	N/A
PHROG	UHGV-1463710_27	phrog_1529	60.8	3.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-1463710_27	638301.HMPREF0444_1489	55.5	0.00000000139	N/A	N/A
structural_annotation	UHGV-1463710_27	PF01381,TIGR02607,COG3655	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-1463710_28	cluster_156468	30.0	0.0000849	NA	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1463710	Yes	20,684	40	62	1
UHGV-1859553	No	15,484	42	47	1
UHGV-1782110	No	11,088	42	33	1
UHGV-1550233	No	10,026	42	30	1