vOTU vOTU-021257

vOTU: vOTU-021257

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-021257
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00095 → vGENUS-08997 → vOTU-021257
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Choladocola → Choladocola sp003480725
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0080185
Biosample ID	N/A
Genome length (bp)	22,183 bps
CheckV completeness	57.20% (Medium-quality)
CDS count	29
CDS density	92.87%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	3	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Choladocola → Choladocola sp003480725	Total connections	10	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 57.2)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0080185_1	UniRef90_A0A3R6PTD8	140.0	1.49995e-41	N/A	N/A
eggNOG-mapper	UHGV-0080185_1	1256908.HMPREF0373_00667	108.0	9.28e-30	N/A	N/A
Pfam	UHGV-0080185_1	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0080185_1	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0080185_2	phrog_36	52.3	0.000000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-0080185_2	UniRef90_A0A3R6X4Q7	236.0	0	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-0080185_2	742740.HMPREF9474_03497	171.0	0	N/A	N/A
structural_annotation	UHGV-0080185_2	PF02996	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0080185_3	1220589.CD32_01770	169.0	0	N/A	N/A
AcrCatalog	UHGV-0080185_3	cluster_38765	179.0	0	NA	N/A
structural_annotation	UHGV-0080185_3	PF15931,NF001462,COG2974	N/A	N/A	N/A	N/A
KOfam	UHGV-0080185_6	K07474	131.5	1.1e-38	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0080185_6	phrog_51	144.9	4.30199e-43	terminase small subunit	head and packaging
UniRef90	UHGV-0080185_6	UniRef90_A0A3R6M7Q6	307.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0080185_6	1298920.KI911353_gene4857	223.0	0	Terminase small subunit	N/A
Pfam	UHGV-0080185_6	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0080185_6	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0080185_6	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0080185_7	K06909	90.8	2.1e-26	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0080185_7	phrog_2	72.0	1.3e-20	terminase large subunit	head and packaging
UniRef90	UHGV-0080185_7	UniRef90_A0A416KE31	922.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0080185_7	742740.HMPREF9474_03500	792.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0080185_7	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0080185_7	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0080185_8	phrog_533	290.8	0	portal protein	head and packaging
UniRef90	UHGV-0080185_8	UniRef90_A0A3R6LPA5	1034.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0080185_8	742740.HMPREF9474_03501	790.0	0	N/A	N/A
structural_annotation	UHGV-0080185_8	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0080185_9	phrog_25639	111.9	1.9e-33	N/A	unknown function
eggNOG-mapper	UHGV-0080185_9	742740.HMPREF9474_03502	106.0	3.33e-29	N/A	N/A
PHROG	UHGV-0080185_10	phrog_581	243.3	0	minor head protein	head and packaging
UniRef90	UHGV-0080185_10	UniRef90_A0A416KE36	1095.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0080185_10	742740.HMPREF9474_03503	502.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0080185_10	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0080185_10	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0080185_10	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0080185_12	phrog_419	99.2	5.5e-29	N/A	unknown function
eggNOG-mapper	UHGV-0080185_12	1232449.BAHV02000016_gene1828	86.7	4.09e-21	N/A	N/A
structural_annotation	UHGV-0080185_12	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-0080185_13	phrog_2303	133.3	2.1e-39	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0080185_13	1304866.K413DRAFT_0806	199.0	0	N/A	N/A
PHROG	UHGV-0080185_14	phrog_422	263.5	0	major head protein	head and packaging
UniRef90	UHGV-0080185_14	UniRef90_A0A3R6QST7	580.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0080185_14	663278.Ethha_1589	394.0	0	N/A	N/A
structural_annotation	UHGV-0080185_14	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0080185_15	phrog_541	92.7	3.4e-27	head-tail adaptor	connector
eggNOG-mapper	UHGV-0080185_15	1298920.KI911353_gene4848	198.0	0	N/A	N/A
PHROG	UHGV-0080185_16	phrog_8710	134.9	2.5e-40	N/A	unknown function
eggNOG-mapper	UHGV-0080185_16	742740.HMPREF9474_03508	176.0	0	N/A	N/A
structural_annotation	UHGV-0080185_16	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0080185_17	phrog_556	64.0	2.1e-18	minor head protein	head and packaging
eggNOG-mapper	UHGV-0080185_17	742740.HMPREF9474_03509	188.0	0	N/A	N/A
PHROG	UHGV-0080185_18	phrog_2595	93.3	2.3e-27	head-tail connector protein	connector
UniRef90	UHGV-0080185_18	UniRef90_UPI001D068DAC	186.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0080185_18	742740.HMPREF9474_03510	183.0	0	N/A	N/A
Pfam	UHGV-0080185_18	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0080185_18	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0080185_19	phrog_820	129.2	2.1e-38	major tail protein	tail
eggNOG-mapper	UHGV-0080185_19	742740.HMPREF9474_03511	251.0	0	domain, Protein	N/A
COG	UHGV-0080185_19	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0080185_19	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0080185_20	phrog_8300	98.6	4.3e-29	N/A	unknown function
eggNOG-mapper	UHGV-0080185_20	742740.HMPREF9474_03512	130.0	4.24e-38	N/A	N/A
structural_annotation	UHGV-0080185_20	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0080185_21	phrog_8355	112.0	1.4e-33	N/A	unknown function
UniRef90	UHGV-0080185_21	UniRef90_UPI0011579C35	166.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0080185_21	742740.HMPREF9474_03513	152.0	0	N/A	N/A
Pfam	UHGV-0080185_21	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0080185_21	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0080185_22	phrog_1535	367.7	0	tail length tape measure protein	tail
UniRef90	UHGV-0080185_22	UniRef90_A0A174SV65	732.0	0	Phage-like protein	N/A
eggNOG-mapper	UHGV-0080185_22	742740.HMPREF9474_03514	683.0	0	tape measure	N/A
COG	UHGV-0080185_22	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0080185_22	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0080185_23	phrog_1194	69.3	5.6e-20	N/A	unknown function
eggNOG-mapper	UHGV-0080185_23	742740.HMPREF9474_03515	153.0	0	N/A	N/A
structural_annotation	UHGV-0080185_23	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0080185_24	phrog_13879	346.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0080185_24	742740.HMPREF9474_03516	843.0	0	N/A	N/A
structural_annotation	UHGV-0080185_24	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0080185_25	phrog_18725	69.2	7.8e-20	N/A	unknown function
eggNOG-mapper	UHGV-0080185_25	1298920.KI911353_gene4838	150.0	4.2039e-45	N/A	N/A
eggNOG-mapper	UHGV-0080185_26	1298920.KI911353_gene4837	64.7	0.000000000151	N/A	N/A
KOfam	UHGV-0080185_29	K04763	195.5	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0080185_29	phrog_1	150.0	2.10195e-44	integrase	integration and excision
UniRef90	UHGV-0080185_29	UniRef90_A0A3R6TX05	635.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0080185_29	1235793.C809_01951	292.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0080185_29	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0080185_29	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0080185_29	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0080185_29	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0080185	Yes	22,183	45	57	1
UHGV-1490144	No	19,599	46	51	1
UHGV-1643468	No	14,617	46	37	1
UHGV-1833037	No	14,023	46	35	1