vOTU vOTU-021318

vOTU: vOTU-021318

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-021318
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-07537 → vOTU-021318
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Acetatifactor → Acetatifactor sp900755865
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1524438
Biosample ID	N/A
Genome length (bp)	29,070 bps
CheckV completeness	85.98% (Medium-quality)
CDS count	50
CDS density	92.55%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Acetatifactor → Acetatifactor sp900755865	Total connections	1	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Anaerovoracaceae → Mogibacterium → Mogibacterium diversum	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 85.98)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1524438_1	phrog_1129	75.5	4e-22	holin	lysis
UniRef90	UHGV-1524438_1	UniRef90_A0A2S0L5I2	216.0	0	Holin	N/A
eggNOG-mapper	UHGV-1524438_1	1140002.I570_01426	68.2	0.000000000000155	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1524438_1	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1524438_1	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1524438_2	phrog_1863	50.8	0.000000000000018	N/A	unknown function
eggNOG-mapper	UHGV-1524438_2	665956.HMPREF1032_02709	62.4	0.00000000000652	N/A	N/A
PHROG	UHGV-1524438_5	phrog_1220	136.1	1.6e-41	head protein	head and packaging
UniRef90	UHGV-1524438_5	UniRef90_E2ELJ8	91.7	3.24e-18	Truncated putative phage structural protein	N/A
eggNOG-mapper	UHGV-1524438_5	936375.HMPREF1152_0017	371.0	0	N/A	N/A
structural_annotation	UHGV-1524438_5	PF20747	N/A	N/A	N/A	N/A
PHROG	UHGV-1524438_6	phrog_538	62.8	2.2e-19	minor tail protein	tail
UniRef90	UHGV-1524438_6	UniRef90_A0A1I3HJS7	75.9	0.0000000000163	Virus ReqiPepy6 Gp37-like protein	N/A
Pfam	UHGV-1524438_6	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-1524438_6	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1524438_7	phrog_33	60.1	5e-17	distal tail protein Dit	tail
UniRef90	UHGV-1524438_7	UniRef90_J5WFT7	442.0	0	Phage tail domain protein	N/A
structural_annotation	UHGV-1524438_7	PF16774,PF21766,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1524438_8	phrog_6900	225.8	0	tail length tape measure protein	tail
UniRef90	UHGV-1524438_8	UniRef90_A0A4D5ZXV4	145.0	5.35e-33	Putative tail protein	N/A
eggNOG-mapper	UHGV-1524438_8	936375.HMPREF1152_0688	784.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1524438_8	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1524438_8	PF20155,MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-1524438_9	phrog_1633	60.4	3.5e-17	N/A	unknown function
UniRef90	UHGV-1524438_9	UniRef90_UPI001CD757D3	62.0	0.0000000000768	N/A	N/A
eggNOG-mapper	UHGV-1524438_9	936375.HMPREF1152_0687	89.7	2.6e-22	N/A	N/A
Pfam	UHGV-1524438_9	PF17318	N/A	N/A	N/A	DUF5361
PHROG	UHGV-1524438_10	phrog_1526	80.9	1.1e-23	N/A	unknown function
eggNOG-mapper	UHGV-1524438_10	936375.HMPREF1152_0686	137.0	2.18995e-41	N/A	N/A
PHROG	UHGV-1524438_11	phrog_117	169.3	0	major tail protein	tail
UniRef90	UHGV-1524438_11	UniRef90_A0A2S0L5R7	360.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1524438_11	936375.HMPREF1152_0685	322.0	0	domain, Protein	N/A
COG	UHGV-1524438_11	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1524438_11	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1524438_12	phrog_123	72.8	5.2e-21	tail terminator	connector
eggNOG-mapper	UHGV-1524438_12	936375.HMPREF1152_0684	105.0	3.74e-28	N/A	N/A
structural_annotation	UHGV-1524438_12	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1524438_13	phrog_387	96.2	1.9e-28	neck protein	connector
UniRef90	UHGV-1524438_13	UniRef90_A0A139NAV7	92.0	7.03e-23	Phage-associated protein	N/A
eggNOG-mapper	UHGV-1524438_13	936375.HMPREF1152_0683	139.0	1.99965e-42	N/A	N/A
PHROG	UHGV-1524438_14	phrog_501	86.4	2.9e-25	head closure Hc1	connector
UniRef90	UHGV-1524438_14	UniRef90_A0A0E3WFP3	137.0	1.1e-39	N/A	N/A
eggNOG-mapper	UHGV-1524438_14	936375.HMPREF1152_0682	189.0	0	N/A	N/A
structural_annotation	UHGV-1524438_14	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1524438_15	phrog_137	95.0	5.7e-28	head-tail adaptor Ad1	connector
UniRef90	UHGV-1524438_15	UniRef90_J5WG12	194.0	0	Phage protein Gp19/Gp15/Gp42	N/A
eggNOG-mapper	UHGV-1524438_15	936375.HMPREF1152_0681	194.0	0	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-1524438_15	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-1524438_15	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-1524438_17	phrog_32396	133.5	6.2e-40	N/A	unknown function
UniRef90	UHGV-1524438_17	UniRef90_A0A2S0L5I3	565.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1524438_17	936375.HMPREF1152_0679	508.0	0	Phage capsid family	N/A
structural_annotation	UHGV-1524438_17	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1524438_18	phrog_233	98.2	1e-28	head scaffolding protein	head and packaging
UniRef90	UHGV-1524438_18	UniRef90_A0A2S0L5H5	284.0	0	Phage scaffold protein	N/A
eggNOG-mapper	UHGV-1524438_18	936375.HMPREF1152_0678	221.0	0	N/A	N/A
Pfam	UHGV-1524438_18	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1524438_18	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1524438_19	phrog_17688	329.5	0	N/A	unknown function
UniRef90	UHGV-1524438_19	UniRef90_A0A2S0L5I4	932.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1524438_19	936375.HMPREF1152_0677	776.0	0	phage terminase, large subunit	N/A
Pfam	UHGV-1524438_19	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1524438_19	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1524438_19	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1524438_20	phrog_2494	111.0	1e-32	minor head protein	head and packaging
UniRef90	UHGV-1524438_20	UniRef90_J5WFW3	401.0	0	CdiA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1524438_20	936375.HMPREF1152_0675	401.0	0	N/A	N/A
Pfam	UHGV-1524438_20	PF18451	N/A	N/A	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C
structural_annotation	UHGV-1524438_20	PF18451,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-1524438_21	phrog_2494	60.7	2.6e-17	minor head protein	head and packaging
eggNOG-mapper	UHGV-1524438_21	665950.HMPREF1025_02536	75.1	0.0000000000000408	N/A	N/A
PHROG	UHGV-1524438_22	phrog_104	273.6	0	portal protein	head and packaging
UniRef90	UHGV-1524438_22	UniRef90_J6HG04	698.0	0	SPP1 Gp6-like phage portal protein	N/A
eggNOG-mapper	UHGV-1524438_22	936375.HMPREF1152_0673	698.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1524438_22	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1524438_22	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-1524438_23	K07474	76.4	7.9e-22	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1524438_23	phrog_2606	125.4	4.5e-37	terminase small subunit	head and packaging
UniRef90	UHGV-1524438_23	UniRef90_A0A2S0L5K1	548.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-1524438_23	936375.HMPREF1152_0672	388.0	0	HNH endonuclease domain protein	N/A
Pfam	UHGV-1524438_23	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
Pfam	UHGV-1524438_23	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-1524438_23	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1524438_23	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1524438_24	phrog_36	60.3	4.1e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1524438_24	UniRef90_J5WFY5	139.0	9.61001e-40	PF07374 family protein	N/A
eggNOG-mapper	UHGV-1524438_24	1120978.KB894081_gene99	62.0	0.000000000312	N/A	N/A
COG	UHGV-1524438_24	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1524438_24	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-1524438_25	phrog_3584	168.0	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1524438_25	UniRef90_A0A1I5LZL1	138.0	5.94e-36	Relaxase/Mobilisation nuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-1524438_25	936375.HMPREF1152_0670	328.0	0	N/A	N/A
structural_annotation	UHGV-1524438_25	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-1524438_27	K03111	148.4	7.14662e-44	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1524438_27	phrog_44	143.6	1.10002e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1524438_27	UniRef90_A0A2S0L5J3	278.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1524438_27	936375.HMPREF1152_1764	216.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1524438_27	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1524438_27	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1524438_27	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1524438_27	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1524438_27	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1524438_28	phrog_2245	61.7	1.2e-17	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-1524438_28	UniRef90_A0A2S0L5I7	147.0	2.8026e-44	MazG domain-containing protein	N/A
Pfam	UHGV-1524438_28	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
PHROG	UHGV-1524438_31	phrog_15609	160.7	0	N/A	unknown function
UniRef90	UHGV-1524438_31	UniRef90_J4W6X5	358.0	0	PF11300 family protein	N/A
eggNOG-mapper	UHGV-1524438_31	936375.HMPREF1152_0669	358.0	0	N/A	N/A
Pfam	UHGV-1524438_31	PF11300	N/A	N/A	N/A	DUF3102
COG	UHGV-1524438_31	COG0188	N/A	N/A	DNA gyrase/topoisomerase IV, subunit A	N/A
structural_annotation	UHGV-1524438_31	PF11300,PF07321,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-1524438_32	phrog_8470	243.3	0	N/A	unknown function
UniRef90	UHGV-1524438_32	UniRef90_J6H8Z2	512.0	0	PcfJ-like protein	N/A
eggNOG-mapper	UHGV-1524438_32	936375.HMPREF1152_0668	512.0	0	PcfJ-like protein	N/A
Pfam	UHGV-1524438_32	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-1524438_32	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-1524438_33	phrog_7445	42.5	0.00000000001	N/A	unknown function
Pfam	UHGV-1524438_33	PF14058	N/A	N/A	PcfK-like protein	PcfK
structural_annotation	UHGV-1524438_33	PF14058	N/A	N/A	N/A	N/A
PHROG	UHGV-1524438_35	phrog_7566	74.7	6.8e-22	N/A	unknown function
structural_annotation	UHGV-1524438_40	NF040990	N/A	N/A	N/A	N/A
PHROG	UHGV-1524438_41	phrog_3202	85.9	2.8e-25	N/A	unknown function
UniRef90	UHGV-1524438_41	UniRef90_UPI000A03AC7F	100.0	4.48e-27	YjzC family protein	N/A
eggNOG-mapper	UHGV-1524438_41	638301.HMPREF0444_1536	93.6	7.12e-25	YjzC-like protein	N/A
Pfam	UHGV-1524438_41	PF14168	N/A	N/A	YjzC-like protein	YjzC
structural_annotation	UHGV-1524438_41	PF14168	N/A	N/A	N/A	N/A
PHROG	UHGV-1524438_42	phrog_10400	86.7	1.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-1524438_42	12402.Q708Q9_9CAUD	58.2	0.0000000000403	N/A	N/A
KOfam	UHGV-1524438_46	K07729	52.6	0.00000000000001	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1524438_46	phrog_8	48.5	0.0000000000002	transcriptional regulator	transcription regulation
UniRef90	UHGV-1524438_46	UniRef90_A0A2S0L5M3	121.0	4.1e-35	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1524438_46	1235794.C811_02109	49.7	0.0000025	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-1524438_46	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1524438_46	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1524438_46	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1524438_47	K01356	126.6	3e-37	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1524438_47	phrog_4	119.4	3.7e-35	transcriptional repressor	transcription regulation
UniRef90	UHGV-1524438_47	UniRef90_A0A2S0L5R2	406.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1524438_47	936375.HMPREF1152_0654	237.0	0	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-1524438_47	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1524438_47	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1524438_47	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1524438_47	PF00717,PF01381,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
PHROG	UHGV-1524438_48	phrog_12156	199.0	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1524438_48	UniRef90_UPI001C2DB3E6	467.0	0	putative DNA binding domain-containing protein	N/A
eggNOG-mapper	UHGV-1524438_48	1485543.JMME01000008_gene659	345.0	0	Putative DNA-binding domain	N/A
Pfam	UHGV-1524438_48	PF04326	N/A	N/A	Schlafen, AlbA_2	SLFN_AlbA_2
Pfam	UHGV-1524438_48	PF13749	N/A	N/A	Putative ATP-dependent DNA helicase recG C-terminal	HATPase_c_4
COG	UHGV-1524438_48	COG2865	N/A	N/A	Predicted transcriptional regulator, contains HTH domain	N/A
structural_annotation	UHGV-1524438_48	PF04703,MF_01819,NF033788,NF033091,COG2865	N/A	N/A	N/A	N/A
KOfam	UHGV-1524438_49	K14059	159.3	0	int; integrase	N/A
PHROG	UHGV-1524438_49	phrog_1	179.3	0	integrase	integration and excision
UniRef90	UHGV-1524438_49	UniRef90_A0A2S0L5I5	658.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1524438_49	936375.HMPREF1152_1040	501.0	0	Phage integrase family	N/A
Pfam	UHGV-1524438_49	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1524438_49	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1524438_49	PF00589,PF14659,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1524438	Yes	29,070	39	86	1
UHGV-1830084	No	16,517	40	48	1
UHGV-1836962	No	16,508	40	48	1
UHGV-1745353	No	10,747	40	31	1