vOTU vOTU-021883

vOTU: vOTU-021883

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-021883
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00060 → vGENUS-00393 → vOTU-021883
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1443309
Biosample ID	N/A
Genome length (bp)	37,739 bps
CheckV completeness	89.40% (Medium-quality)
CDS count	55
CDS density	96.88%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	20	Host agreement	75
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	3	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 89.4)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1443309_1	UniRef90_A0A843IZ65	63.5	0.0000000000106	Sigma70_r4 domain-containing protein	N/A
Pfam	UHGV-1443309_1	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
COG	UHGV-1443309_1	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1443309_1	PF04545,MF_00245,TIGR02985,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-1443309_2	K11062	109.0	4.2e-32	entD; probable enterotoxin D	N/A
PHROG	UHGV-1443309_2	phrog_1794	108.6	7.7e-32	amidase	lysis
UniRef90	UHGV-1443309_2	UniRef90_A0A3D4VSU2	164.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1443309_2	397290.C810_00440	150.0	6.17e-40	Ami_2	N/A
Pfam	UHGV-1443309_2	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1443309_2	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1443309_2	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1443309_3	phrog_13256	61.3	9.7e-18	N/A	unknown function
eggNOG-mapper	UHGV-1443309_3	428125.CLOLEP_01907	75.9	1.98e-17	N/A	N/A
PHROG	UHGV-1443309_5	phrog_937	45.7	0.0000000000011	hemolysin	other
eggNOG-mapper	UHGV-1443309_5	1519439.JPJG01000023_gene533	73.6	0.00000000000000262	N/A	N/A
KOfam	UHGV-1443309_6	K20846	68.1	8.2e-20	cgkA; kappa-carrageenase [EC:3.2.1.83]	N/A
PHROG	UHGV-1443309_6	phrog_215	103.7	1.4e-30	structural protein with Ig domain	head and packaging
UniRef90	UHGV-1443309_6	UniRef90_A0A1I1Z9R5	109.0	1.29e-21	Calcineurin-like phosphoesterase	N/A
eggNOG-mapper	UHGV-1443309_6	485916.Dtox_1961	87.0	0.000000000000011	PFAM Bacterial Ig-like domain (group 2)	N/A
Pfam	UHGV-1443309_6	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-1443309_6	COG3210	N/A	N/A	Large exoprotein involved in heme utilization or adhesion	N/A
structural_annotation	UHGV-1443309_6	PF02368,PF09423,MF_00575,NF003743,NF005261,COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-1443309_7	phrog_8745	45.4	0.00000000000033	tail fiber protein	tail
Pfam	UHGV-1443309_7	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1443309_7	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
eggNOG-mapper	UHGV-1443309_8	1232443.BAIA02000078_gene14	56.2	0.0000037	nuclear chromosome segregation	N/A
COG	UHGV-1443309_8	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
KOfam	UHGV-1443309_9	K16628	40.3	0.0000000000085	COL7A; collagen type VII alpha	N/A
eggNOG-mapper	UHGV-1443309_9	1519439.JPJG01000060_gene1892	54.7	0.00000431	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-1443309_9	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1443309_9	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-1443309_10	PF01835,NF005176,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-1443309_11	phrog_28077	66.8	1.3e-19	N/A	unknown function
UniRef90	UHGV-1443309_11	UniRef90_A0A1Y3SMK5	1249.0	0	MuF_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1443309_11	693746.OBV_23800	670.0	0	N/A	N/A
UniRef90	UHGV-1443309_12	UniRef90_R5DCX9	191.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1443309_12	1410650.JHWL01000003_gene2815	128.0	2.97e-30	N/A	N/A
eggNOG-mapper	UHGV-1443309_14	537007.BLAHAN_05255	65.1	0.0000000215	N/A	N/A
PHROG	UHGV-1443309_15	phrog_12105	114.8	4.9e-34	N/A	unknown function
eggNOG-mapper	UHGV-1443309_15	1226322.HMPREF1545_03850	56.2	0.0000000477	N/A	N/A
PHROG	UHGV-1443309_16	phrog_15239	44.3	0.0000000000021	N/A	unknown function
PHROG	UHGV-1443309_17	phrog_1357	245.7	0	major head protein	head and packaging
UniRef90	UHGV-1443309_17	UniRef90_A0A2V2CFL5	399.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1443309_17	1410650.JHWL01000003_gene2830	293.0	0	N/A	N/A
Pfam	UHGV-1443309_17	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-1443309_17	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1443309_17	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1443309_18	phrog_13908	196.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1443309_18	1410650.JHWL01000003_gene2831	127.0	6.47e-32	N/A	N/A
PHROG	UHGV-1443309_19	phrog_156	304.3	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1443309_19	1410650.JHWL01000003_gene2833	526.0	0	N/A	N/A
structural_annotation	UHGV-1443309_19	PF16510,MF_04120,TIGR01538,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1443309_20	phrog_511	212.3	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1443309_20	1410650.JHWL01000003_gene2827	325.0	0	N/A	N/A
structural_annotation	UHGV-1443309_20	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
KOfam	UHGV-1443309_21	K06909	134.0	1.4e-39	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1443309_21	phrog_2	124.3	1.5e-36	terminase large subunit	head and packaging
UniRef90	UHGV-1443309_21	UniRef90_A0A810Q5R0	613.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1443309_21	1410650.JHWL01000003_gene2834	577.0	0	N/A	N/A
Pfam	UHGV-1443309_21	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1443309_21	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1443309_21	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
Pfam	UHGV-1443309_22	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1443309_22	PF16677	N/A	N/A	N/A	N/A
UniRef90	UHGV-1443309_23	UniRef90_A0A8G1TBS8	51.2	0.000000693	Conjugal transfer protein	N/A
eggNOG-mapper	UHGV-1443309_23	1235790.C805_01029	53.5	0.0000000143	Cysteine-rich KTR	N/A
Pfam	UHGV-1443309_23	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
PHROG	UHGV-1443309_24	phrog_3584	115.0	5.8e-34	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1443309_24	537013.CLOSTMETH_02141	78.6	0.0000000000000042	N/A	N/A
structural_annotation	UHGV-1443309_24	PF21578,MF_00360	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1443309_25	665956.HMPREF1032_03087	54.7	0.0000000328	N/A	N/A
PHROG	UHGV-1443309_28	phrog_190	101.5	8.3e-30	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1443309_28	UniRef90_UPI0006C2AC63	113.0	3.39e-29	N/A	N/A
eggNOG-mapper	UHGV-1443309_28	693746.OBV_25250	111.0	4.84e-29	N/A	N/A
Pfam	UHGV-1443309_28	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1443309_28	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-1443309_36	phrog_9298	58.3	1e-16	radical SAM domain protein	other
UniRef90	UHGV-1443309_36	UniRef90_A0A841L4D7	315.0	0	Radical SAM superfamily enzyme YgiQ (UPF0313 family)	N/A
eggNOG-mapper	UHGV-1443309_36	742738.HMPREF9460_03770	288.0	0	radical SAM domain protein	N/A
COG	UHGV-1443309_36	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-1443309_36	PF04055,MF_01864,TIGR04072,COG0621	N/A	N/A	N/A	N/A
PHROG	UHGV-1443309_37	phrog_7314	44.6	0.0000000000019	N/A	unknown function
UniRef90	UHGV-1443309_38	UniRef90_K1SZ48	108.0	1.22e-28	Phosphoadenosine phosphosulfate reductase (Fragment)	N/A
eggNOG-mapper	UHGV-1443309_38	411902.CLOBOL_06768	84.7	3.45e-18	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-1443309_38	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1443309_38	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
KOfam	UHGV-1443309_39	K00558	158.5	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1443309_39	phrog_363	209.8	0	DNA methyltransferase	other
UniRef90	UHGV-1443309_39	UniRef90_A0A1Y4W2J0	263.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1443309_39	693746.OBV_01900	289.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1443309_39	MTase_II_00058	125.8	7e-37	Type II methyltransferase	RM
Pfam	UHGV-1443309_39	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1443309_39	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1443309_39	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1443309_39	PF00145,MF_02100,TIGR00675,COG0270	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1443309_43	PF05082	N/A	N/A	N/A	N/A
KOfam	UHGV-1443309_54	K22300	50.3	0.000000000000052	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1443309_54	phrog_8	43.8	0.0000000000052	transcriptional regulator	transcription regulation
UniRef90	UHGV-1443309_54	UniRef90_A0A1C5N467	115.0	1.2e-30	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-1443309_54	411471.SUBVAR_05818	100.0	7.93e-26	sequence-specific DNA binding	N/A
Pfam	UHGV-1443309_54	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1443309_54	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1443309_54	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1443309	Yes	37,739	58	89	1
UHGV-0198221	No	23,800	58	57	1
UHGV-0147953	No	18,384	57	44	1