vOTU vOTU-022007

vOTU: vOTU-022007

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-022007
Number of genomes	3
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter rectalis
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00799 → vGENUS-15750 → vOTU-022007
Host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Clostridium_AQ → Clostridium_AQ innocuum
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1535309
Biosample ID	SAMEA3879589
Genome length (bp)	32,668 bps
CheckV completeness	80.61% (Medium-quality)
CDS count	51
CDS density	94.73%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Clostridium_AQ → Clostridium_AQ innocuum	Total connections	89	Host agreement	97.75
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter rectalis	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 80.61)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1535309_1	phrog_16267	145.4	0	N/A	unknown function
UniRef90	UHGV-1535309_1	UniRef90_G1VS14	1079.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1535309_1	552396.HMPREF0863_01647	834.0	0	Phage minor structural protein	N/A
COG	UHGV-1535309_1	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1535309_1	PF14594,PF00629,NF033848,NF033675,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1535309_2	phrog_1401	49.0	0.00000000000009	N/A	unknown function
UniRef90	UHGV-1535309_2	UniRef90_A0A7C6P910	55.5	0.00000024	N/A	N/A
eggNOG-mapper	UHGV-1535309_2	1262449.CP6013_3212	53.9	0.00000016	N/A	N/A
structural_annotation	UHGV-1535309_2	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-1535309_3	phrog_2566	51.6	0.000000000000013	N/A	unknown function
eggNOG-mapper	UHGV-1535309_3	1294142.CINTURNW_1040	62.0	0.0000000000137	N/A	N/A
PHROG	UHGV-1535309_4	phrog_1194	63.2	3.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-1535309_4	552396.HMPREF0863_01645	175.0	0	N/A	N/A
structural_annotation	UHGV-1535309_4	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1535309_5	phrog_37487	766.6	0	N/A	unknown function
UniRef90	UHGV-1535309_5	UniRef90_A0A4R3TDI6	829.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1535309_5	552396.HMPREF0863_01644	578.0	0	phage tail tape measure protein	N/A
COG	UHGV-1535309_5	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1535309_6	phrog_8355	126.4	4.9e-38	N/A	unknown function
UniRef90	UHGV-1535309_6	UniRef90_A0A4R3TDU8	115.0	9.19e-32	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1535309_6	552396.HMPREF0863_01643	111.0	7.3e-31	N/A	N/A
PHROG	UHGV-1535309_7	phrog_8300	121.4	2.9e-36	N/A	unknown function
eggNOG-mapper	UHGV-1535309_7	1232449.BAHV02000018_gene1519	103.0	3.88e-27	N/A	N/A
structural_annotation	UHGV-1535309_7	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-1535309_8	phrog_820	123.8	8.5e-37	major tail protein	tail
eggNOG-mapper	UHGV-1535309_8	552396.HMPREF0863_01641	207.0	0	domain, Protein	N/A
COG	UHGV-1535309_8	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1535309_8	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1535309_9	phrog_2595	104.8	5.8e-31	head-tail connector protein	connector
UniRef90	UHGV-1535309_9	UniRef90_UPI001D0A149F	202.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1535309_9	552396.HMPREF0863_01640	232.0	0	N/A	N/A
Pfam	UHGV-1535309_9	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1535309_9	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1535309_10	phrog_556	67.0	2.2e-19	minor head protein	head and packaging
UniRef90	UHGV-1535309_10	UniRef90_UPI001C3956D2	244.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1535309_10	552396.HMPREF0863_01639	199.0	0	N/A	N/A
PHROG	UHGV-1535309_11	phrog_8710	132.0	1.8e-39	N/A	unknown function
eggNOG-mapper	UHGV-1535309_11	552396.HMPREF0863_01638	208.0	0	N/A	N/A
structural_annotation	UHGV-1535309_11	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1535309_12	phrog_541	85.4	5.6e-25	head-tail adaptor	connector
eggNOG-mapper	UHGV-1535309_12	552396.HMPREF0863_01637	231.0	0	N/A	N/A
PHROG	UHGV-1535309_13	phrog_15682	58.7	7.7e-17	N/A	unknown function
eggNOG-mapper	UHGV-1535309_13	1395587.P364_0122060	60.8	0.0000000000614	N/A	N/A
PHROG	UHGV-1535309_14	phrog_212	289.1	0	major head protein	head and packaging
UniRef90	UHGV-1535309_14	UniRef90_UPI000E47E686	620.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-1535309_14	1262449.CP6013_3199	479.0	0	N/A	N/A
structural_annotation	UHGV-1535309_14	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1535309_15	phrog_2303	129.0	3.6e-38	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1535309_15	585501.HMPREF6123_0836	113.0	8.98e-29	N/A	N/A
PHROG	UHGV-1535309_17	phrog_581	328.4	0	minor head protein	head and packaging
UniRef90	UHGV-1535309_17	UniRef90_UPI000E51EEC2	1092.0	0	capsid protein	N/A
eggNOG-mapper	UHGV-1535309_17	552396.HMPREF0863_01630	790.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1535309_17	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
structural_annotation	UHGV-1535309_17	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1535309_18	phrog_533	257.2	0	portal protein	head and packaging
UniRef90	UHGV-1535309_18	UniRef90_UPI000E474B3E	978.0	0	capsid protein	N/A
eggNOG-mapper	UHGV-1535309_18	1294142.CINTURNW_1024	555.0	0	N/A	N/A
structural_annotation	UHGV-1535309_18	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1535309_19	K06909	67.5	2.1e-19	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1535309_19	phrog_29775	93.1	1.9e-27	N/A	unknown function
UniRef90	UHGV-1535309_19	UniRef90_UPI000E521D30	926.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1535309_19	1151292.QEW_4394	680.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1535309_19	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1535309_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1535309_19	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1535309_20	K07474	88.2	1.7e-25	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1535309_20	phrog_2606	280.0	0	terminase small subunit	head and packaging
UniRef90	UHGV-1535309_20	UniRef90_UPI000E4E58D8	557.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-1535309_20	428127.EUBDOL_01230	223.0	0	terminase (Small subunit)	N/A
Pfam	UHGV-1535309_20	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
Pfam	UHGV-1535309_20	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1535309_20	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1535309_20	PF03592,PF10668,NF040601,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1535309_21	phrog_1233	89.8	3.1e-26	N/A	unknown function
eggNOG-mapper	UHGV-1535309_21	1232449.BAHV02000018_gene1535	146.0	1.13505e-43	N/A	N/A
PHROG	UHGV-1535309_24	phrog_3243	82.8	3.7e-24	N/A	unknown function
eggNOG-mapper	UHGV-1535309_24	428127.EUBDOL_01231	403.0	0	N/A	N/A
structural_annotation	UHGV-1535309_24	PF15072,MF_00075,TIGR00008,COG0361	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1535309_25	PF05263,MF_00245,TIGR01636	N/A	N/A	N/A	N/A
UniRef90	UHGV-1535309_27	UniRef90_A0A223MTW1	191.0	0	N/A	N/A
Pfam	UHGV-1535309_27	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1535309_27	PF04448,NF041588	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1535309_28	PF18300,MF_00085,NF003076	N/A	N/A	N/A	N/A
KOfam	UHGV-1535309_29	K03111	157.1	0	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1535309_29	phrog_44	155.3	0	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1535309_29	UniRef90_UPI001C384F19	287.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1535309_29	658659.HMPREF0983_02345	270.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1535309_29	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1535309_29	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1535309_29	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1535309_29	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1535309_29	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1535309_30	1232449.BAHV02000016_gene1829	190.0	0	N/A	N/A
PHROG	UHGV-1535309_33	phrog_8470	162.0	0	N/A	unknown function
UniRef90	UHGV-1535309_33	UniRef90_UPI0019D1E5B4	118.0	8.8e-25	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-1535309_33	1157490.EL26_01845	95.9	3.02e-18	PcfJ-like protein	N/A
Pfam	UHGV-1535309_33	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-1535309_33	PF14284,NF008072	N/A	N/A	N/A	N/A
PHROG	UHGV-1535309_34	phrog_7445	88.5	6e-26	N/A	unknown function
UniRef90	UHGV-1535309_34	UniRef90_A0A4R3TDL2	128.0	1.45e-35	PcfK-like protein	N/A
eggNOG-mapper	UHGV-1535309_34	762984.HMPREF9445_00155	79.7	3.8e-17	PcfK-like protein	N/A
Pfam	UHGV-1535309_34	PF14058	N/A	N/A	PcfK-like protein	PcfK
structural_annotation	UHGV-1535309_34	PF14058	N/A	N/A	N/A	N/A
KOfam	UHGV-1535309_35	K02086	47.7	0.000000000000021	dnaD; DNA replication protein	N/A
PHROG	UHGV-1535309_35	phrog_2514	95.4	3.7e-28	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1535309_35	UniRef90_G1VS49	456.0	0	DnaB_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1535309_35	428127.EUBDOL_01245	135.0	5.58e-36	DnaD domain protein	N/A
Pfam	UHGV-1535309_35	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-1535309_35	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-1535309_35	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
PHROG	UHGV-1535309_37	phrog_190	134.3	6.8e-40	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1535309_37	UniRef90_UPI001156D044	230.0	0	N/A	N/A
eggNOG-mapper	UHGV-1535309_37	445974.CLORAM_02947	137.0	3.56e-40	N/A	N/A
Pfam	UHGV-1535309_37	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1535309_37	PF06356,MF_04160,NF033179	N/A	N/A	N/A	N/A
PHROG	UHGV-1535309_38	phrog_398	169.9	0	N/A	unknown function
UniRef90	UHGV-1535309_38	UniRef90_UPI000CD40693	135.0	5.91e-36	putative HNHc nuclease	N/A
eggNOG-mapper	UHGV-1535309_38	1485543.JMME01000021_gene802	123.0	5.13e-32	Putative HNHc nuclease	N/A
Pfam	UHGV-1535309_38	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-1535309_38	PF16784	N/A	N/A	N/A	N/A
PHROG	UHGV-1535309_39	phrog_18107	118.5	6.5e-35	N/A	unknown function
UniRef90	UHGV-1535309_39	UniRef90_UPI00058F46CC	127.0	1.11e-33	N/A	N/A
eggNOG-mapper	UHGV-1535309_39	536233.CLO_1545	99.8	1.18e-23	N/A	N/A
structural_annotation	UHGV-1535309_39	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-1535309_40	phrog_253	123.5	1.4e-36	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1535309_40	UniRef90_UPI001B3C84DE	70.9	0.00000000000204	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-1535309_40	742823.HMPREF9465_00905	88.6	5.08e-20	Siphovirus Gp157	N/A
Pfam	UHGV-1535309_40	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1535309_40	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-1535309_41	phrog_2872	200.4	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1535309_41	UniRef90_UPI000C06E88C	317.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1535309_41	1304866.K413DRAFT_0827	302.0	0	AAA domain	N/A
Pfam	UHGV-1535309_41	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1535309_41	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-1535309_45	phrog_373	168.2	0	anti-repressor	transcription regulation
UniRef90	UHGV-1535309_45	UniRef90_UPI001C389B6A	452.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1535309_45	278197.PEPE_0752	160.0	0	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-1535309_45	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-1535309_45	PF10552	N/A	N/A	ORF6C domain	ORF6C
NCBIFam	UHGV-1535309_45	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-1535309_45	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1535309_45	PF10552,PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
KOfam	UHGV-1535309_46	K17080	109.9	2.1e-32	PHB1; prohibitin 1	N/A
PHROG	UHGV-1535309_46	phrog_200	155.9	0	lipoprotein	other
UniRef90	UHGV-1535309_46	UniRef90_A0A1Y4SQB0	302.0	0	PHB domain-containing protein	N/A
eggNOG-mapper	UHGV-1535309_46	1123299.AUKZ01000018_gene199	164.0	0	COG0330 Membrane protease subunits, stomatin prohibitin homologs	N/A
Pfam	UHGV-1535309_46	PF01145	N/A	N/A	SPFH domain / Band 7 family	Band_7
COG	UHGV-1535309_46	COG0330	N/A	N/A	Regulator of protease activity HflC, stomatin/prohibitin superfamily	N/A
structural_annotation	UHGV-1535309_46	PF01145,MF_01562,NF008181,COG2268	N/A	N/A	N/A	N/A
PHROG	UHGV-1535309_49	phrog_1305	146.5	1.20512e-43	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1535309_49	UniRef90_UPI00156E7345	184.0	0	N/A	N/A
eggNOG-mapper	UHGV-1535309_49	445974.CLORAM_02962	176.0	0	N/A	N/A
structural_annotation	UHGV-1535309_49	COG2250	N/A	N/A	N/A	N/A
PHROG	UHGV-1535309_50	phrog_14088	65.6	4.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-1535309_50	1235802.C823_04730	52.8	0.0000000157	N/A	N/A
KOfam	UHGV-1535309_51	K18830	70.0	4.6e-20	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1535309_51	phrog_8	57.5	2.9e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1535309_51	UniRef90_UPI001E5FEC8A	226.0	0	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1535309_51	999413.HMPREF1094_02044	122.0	1.74e-34	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-1535309_51	retron_type_VI_hth_cluster2_1	44.3	0.00000000000002	N/A	Retron
Pfam	UHGV-1535309_51	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1535309_51	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1535309_51	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1535309	Yes	32,668	42	81	1
UHGV-0151384	No	18,909	39	50	1
UHGV-0350568	No	12,104	41	32	1