vOTU vOTU-022501

vOTU: vOTU-022501

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-022501
Number of genomes	3
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00005 → vGENUS-00181 → vOTU-022501
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0197750
Biosample ID	SAMN09781725
Genome length (bp)	23,843 bps
CheckV completeness	56.31% (Medium-quality)
CDS count	45
CDS density	90.61%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	77	Host agreement	83.12
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	5	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 56.31)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0197750_1	UniRef90_B0PAM4	145.0	5.38995e-41	YqaJ domain-containing protein	N/A
structural_annotation	UHGV-0197750_1	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
UniRef90	UHGV-0197750_2	UniRef90_A0A845QLQ8	188.0	0	N/A	N/A
eggNOG-mapper	UHGV-0197750_2	33035.JPJF01000135_gene5082	114.0	5.68e-29	N/A	N/A
Pfam	UHGV-0197750_2	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0197750_2	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
UniRef90	UHGV-0197750_4	UniRef90_A0A8D9UH91	311.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0197750_4	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
structural_annotation	UHGV-0197750_4	PF01381,PF21715,NF041951,TIGR04176,COG1476,COG1654	N/A	N/A	N/A	N/A
PHROG	UHGV-0197750_6	phrog_22529	53.6	0.0000000000000027	N/A	unknown function
UniRef90	UHGV-0197750_6	UniRef90_A0A8D9UHA1	265.0	0	3D containing protein	N/A
eggNOG-mapper	UHGV-0197750_6	742733.HMPREF9469_00853	65.5	0.0000000000568	3D domain	N/A
Pfam	UHGV-0197750_6	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0197750_6	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-0197750_6	COG3584	N/A	N/A	N/A	N/A
UniRef90	UHGV-0197750_9	UniRef90_UPI0018995761	84.7	2.45e-20	helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-0197750_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0197750_9	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0197750_10	UniRef90_UPI001E54DE4F	92.8	3.19e-22	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0197750_10	1378168.N510_01712	63.5	0.000000000192	N/A	N/A
Pfam	UHGV-0197750_10	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0197750_10	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0197750_14	UniRef90_A0A8D9UHA6	297.0	0	Helix-turn-helix XRE-family like protein	N/A
Pfam	UHGV-0197750_14	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0197750_14	PF12844,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0197750_15	K06400	293.0	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0197750_15	phrog_95	292.7	0	integrase	integration and excision
UniRef90	UHGV-0197750_15	UniRef90_A0A1C6HT72	381.0	0	Resolvase, N terminal domain	N/A
eggNOG-mapper	UHGV-0197750_15	357809.Cphy_2997	278.0	0	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-0197750_15	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0197750_15	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0197750_15	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0197750_15	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0197750_16	1226322.HMPREF1545_00079	90.1	5.05e-22	N/A	N/A
PHROG	UHGV-0197750_17	phrog_28802	67.0	2e-19	N/A	unknown function
structural_annotation	UHGV-0197750_17	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0197750_18	phrog_20016	196.5	0	N/A	unknown function
UniRef90	UHGV-0197750_18	UniRef90_A0A285PT46	199.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0197750_18	397290.C810_05214	167.0	0	N/A	N/A
structural_annotation	UHGV-0197750_18	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0197750_19	phrog_16490	135.1	1.69978e-42	N/A	unknown function
eggNOG-mapper	UHGV-0197750_19	1408437.JNJN01000043_gene803	133.0	2.37e-35	N/A	N/A
PHROG	UHGV-0197750_20	phrog_22984	85.5	3.1e-25	N/A	unknown function
PHROG	UHGV-0197750_21	phrog_21718	103.8	1.4e-30	N/A	unknown function
eggNOG-mapper	UHGV-0197750_21	397290.C810_05210	72.8	0.0000000000000509	N/A	N/A
PHROG	UHGV-0197750_22	phrog_3754	117.5	8.6e-35	N/A	unknown function
eggNOG-mapper	UHGV-0197750_22	1226322.HMPREF1545_00073	172.0	0	N/A	N/A
PHROG	UHGV-0197750_24	phrog_435	61.2	2e-17	endolysin	lysis
UniRef90	UHGV-0197750_24	UniRef90_A0A8D9PDS4	453.0	0	Cell wall hydrolase/autolysin	N/A
eggNOG-mapper	UHGV-0197750_24	1226322.HMPREF1545_01953	92.4	9.35e-20	N-acetylmuramoyl-L-alanine amidase	N/A
COG	UHGV-0197750_24	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0197750_24	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0197750_25	phrog_1129	75.4	4.7e-22	holin	lysis
UniRef90	UHGV-0197750_25	UniRef90_A0A8D9PDD4	182.0	0	Holin	N/A
eggNOG-mapper	UHGV-0197750_25	1226322.HMPREF1545_00069	110.0	1.24e-30	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0197750_25	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0197750_25	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0197750_26	phrog_4105	103.7	9.3e-31	N/A	unknown function
UniRef90	UHGV-0197750_26	UniRef90_A0A8D9UHA9	203.0	0	Holin protein	N/A
eggNOG-mapper	UHGV-0197750_26	411460.RUMTOR_01326	139.0	1.92006e-41	N/A	N/A
PHROG	UHGV-0197750_28	phrog_2310	57.0	1.9e-16	N/A	unknown function
eggNOG-mapper	UHGV-0197750_28	1151292.QEW_0364	50.1	0.0000000968	N/A	N/A
PHROG	UHGV-0197750_31	phrog_2295	43.5	3.3e-20	N/A	unknown function
Pfam	UHGV-0197750_31	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-0197750_31	PF21722	N/A	N/A	N/A	N/A
PHROG	UHGV-0197750_33	phrog_18725	68.3	3.9e-20	N/A	unknown function
eggNOG-mapper	UHGV-0197750_33	693746.OBV_18220	102.0	1.52e-24	N/A	N/A
structural_annotation	UHGV-0197750_33	PF13754,COG2372	N/A	N/A	N/A	N/A
KOfam	UHGV-0197750_34	K01361	60.1	1.4e-17	E3.4.21.96; lactocepin [EC:3.4.21.96]	N/A
PHROG	UHGV-0197750_34	phrog_11157	228.0	0	N/A	unknown function
UniRef90	UHGV-0197750_34	UniRef90_UPI001C10C6DC	395.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0197750_34	476272.RUMHYD_02867	291.0	0	N/A	N/A
Pfam	UHGV-0197750_34	PF19077	N/A	N/A	Bacterial Ig-like domain	Big_13
Pfam	UHGV-0197750_34	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
COG	UHGV-0197750_34	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-0197750_34	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0197750_36	phrog_13879	250.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0197750_36	1226322.HMPREF1545_00061	490.0	0	N/A	N/A
structural_annotation	UHGV-0197750_36	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0197750_37	phrog_1194	61.0	1.8e-17	N/A	unknown function
eggNOG-mapper	UHGV-0197750_37	1226322.HMPREF1545_00060	236.0	0	N/A	N/A
structural_annotation	UHGV-0197750_37	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0197750_38	phrog_1535	126.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0197750_38	UniRef90_A0A810PX76	304.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0197750_38	1235797.C816_04182	265.0	0	SLT domain	N/A
COG	UHGV-0197750_38	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0197750_38	PF16789,TIGR02473	N/A	N/A	N/A	N/A
PHROG	UHGV-0197750_39	phrog_806	88.0	1.1e-25	N/A	unknown function
UniRef90	UHGV-0197750_39	UniRef90_A0A212ITM5	214.0	0	Telomeric repeat-binding factor 2	N/A
eggNOG-mapper	UHGV-0197750_39	476272.RUMHYD_01730	160.0	0	N/A	N/A
Pfam	UHGV-0197750_39	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0197750_39	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-0197750_39	PF11611,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-0197750_40	phrog_706	118.8	3.9e-35	N/A	unknown function
UniRef90	UHGV-0197750_40	UniRef90_UPI000682A80B	222.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0197750_40	693746.OBV_18170	217.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0197750_40	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0197750_40	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0197750_41	phrog_11299	71.4	1.4e-20	N/A	unknown function
eggNOG-mapper	UHGV-0197750_41	693746.OBV_18160	144.0	2.18042e-42	N/A	N/A
structural_annotation	UHGV-0197750_41	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0197750_42	phrog_3099	91.6	8.8e-27	N/A	unknown function
eggNOG-mapper	UHGV-0197750_42	1226322.HMPREF1545_00056	245.0	0	N/A	N/A
structural_annotation	UHGV-0197750_42	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0197750_43	phrog_3266	61.8	9.6e-18	tail completion	connector
UniRef90	UHGV-0197750_43	UniRef90_A0A2Z4QA01	123.0	8.73e-34	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0197750_43	1232443.BAIA02000078_gene24	186.0	0	N/A	N/A
structural_annotation	UHGV-0197750_43	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0197750_44	phrog_556	79.2	4.2e-23	minor head protein	head and packaging
UniRef90	UHGV-0197750_44	UniRef90_UPI00195E1497	186.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0197750_44	1226322.HMPREF1545_00054	155.0	0	Minor capsid protein	N/A
Pfam	UHGV-0197750_44	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0197750_44	PF11114	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0197750_45	642492.Clole_0823	48.1	0.00000109	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0197750	Yes	23,843	53	56	1
UHGV-0177626	No	20,291	52	48	1
UHGV-0175590	No	13,733	53	32	1