vOTU vOTU-022853

vOTU: vOTU-022853

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-022853
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00124 → vOTU-022853
Host lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Anaerovoracaceae → Copromorpha
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0188143
Biosample ID	SAMEA2579965
Genome length (bp)	25,730 bps
CheckV completeness	64.94% (Medium-quality)
CDS count	47
CDS density	96.42%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Anaerovoracaceae → Copromorpha	Total connections	2	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 64.94)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0188143_1	COG4446	N/A	N/A	N/A	N/A
Pfam	UHGV-0188143_4	PF13248	N/A	N/A	zinc-ribbon domain	zf-ribbon_3
PHROG	UHGV-0188143_5	phrog_8684	88.0	3.1e-26	N/A	unknown function
UniRef90	UHGV-0188143_5	UniRef90_G5HEN9	118.0	1.04e-31	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0188143_5	742733.HMPREF9469_00912	118.0	1.74e-32	YopX protein	N/A
Pfam	UHGV-0188143_5	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0188143_5	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0188143_5	PF09643,TIGR01671	N/A	N/A	N/A	N/A
UniRef90	UHGV-0188143_7	UniRef90_A0A1Y4LYN3	61.6	0.000000000719	N/A	N/A
Pfam	UHGV-0188143_7	PF04448	N/A	N/A	N/A	DUF551
KOfam	UHGV-0188143_8	K07451	43.8	0.0000000000048	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0188143_8	phrog_2118	117.1	1.7e-34	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0188143_8	UniRef90_A0A417HX51	142.0	1.04999e-41	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0188143_8	742740.HMPREF9474_03129	124.0	2.94e-35	HNH endonuclease	N/A
Pfam	UHGV-0188143_8	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0188143_8	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0188143_8	TIGR02646,COG1403	N/A	N/A	N/A	N/A
KOfam	UHGV-0188143_9	K00558	280.4	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0188143_9	phrog_116	312.2	0	DNA methyltransferase	other
UniRef90	UHGV-0188143_9	UniRef90_A0A3A8RHV5	438.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-0188143_9	1300150.EMQU_2511	411.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0188143_9	MTase_II_00058	332.6	0	Type II methyltransferase	RM
Pfam	UHGV-0188143_9	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0188143_9	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0188143_9	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0188143_9	PF00145,MF_00786,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0188143_12	K03111	134.7	1e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0188143_12	phrog_44	134.6	6.7e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0188143_12	UniRef90_A0A316Q453	238.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0188143_12	1120998.AUFC01000019_gene325	191.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0188143_12	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0188143_12	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0188143_12	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0188143_12	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0188143_12	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0188143_14	phrog_474	104.2	2.1e-30	phosphofructokinase	other
UniRef90	UHGV-0188143_14	UniRef90_A0A316NLA2	108.0	7.99e-29	N/A	N/A
eggNOG-mapper	UHGV-0188143_14	665956.HMPREF1032_00639	92.8	1.24e-23	N/A	N/A
Pfam	UHGV-0188143_14	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-0188143_14	PF19905	N/A	N/A	N/A	N/A
PHROG	UHGV-0188143_15	phrog_25385	56.7	3.8e-16	N/A	unknown function
eggNOG-mapper	UHGV-0188143_15	476272.RUMHYD_03328	55.1	0.000000021	N/A	N/A
PHROG	UHGV-0188143_16	phrog_4433	182.2	0	N/A	unknown function
UniRef90	UHGV-0188143_16	UniRef90_UPI0015C58C2D	165.0	0	N/A	N/A
eggNOG-mapper	UHGV-0188143_16	394503.Ccel_3068	196.0	0	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0188143_16	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
PHROG	UHGV-0188143_17	phrog_244	76.8	3.8e-22	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0188143_17	1121335.Clst_0378	127.0	9.39e-37	N/A	N/A
structural_annotation	UHGV-0188143_17	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0188143_18	phrog_9804	123.7	1.5e-36	N/A	unknown function
UniRef90	UHGV-0188143_18	UniRef90_A0A1C5T9U7	216.0	0	Loader and inhibitor of phage G40P	N/A
eggNOG-mapper	UHGV-0188143_18	585394.RHOM_14005	124.0	2.21e-33	Loader and inhibitor of phage G40P	N/A
AcrCatalog	UHGV-0188143_18	cluster_137185	114.0	1.86e-34	NA	N/A
Pfam	UHGV-0188143_18	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0188143_18	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0188143_19	phrog_15768	95.7	5.3e-28	N/A	unknown function
eggNOG-mapper	UHGV-0188143_19	886379.AEWI01000001_gene1766	165.0	0	N/A	N/A
structural_annotation	UHGV-0188143_19	PF10771,MF_01177,TIGR01714,COG5529	N/A	N/A	N/A	N/A
PHROG	UHGV-0188143_20	phrog_1389	66.2	4.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-0188143_20	1347392.CCEZ01000060_gene3269	73.6	0.0000000000000018	N/A	N/A
structural_annotation	UHGV-0188143_20	PF11056,TIGR04376,COG1842	N/A	N/A	N/A	N/A
PHROG	UHGV-0188143_21	phrog_7566	104.6	4.8e-31	N/A	unknown function
eggNOG-mapper	UHGV-0188143_21	411902.CLOBOL_05695	72.4	0.00000000000000203	N/A	N/A
PHROG	UHGV-0188143_22	phrog_434	42.6	0.0000000000086	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0188143_22	UniRef90_B0PAM4	105.0	5.83e-25	YqaJ domain-containing protein	N/A
Pfam	UHGV-0188143_22	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
structural_annotation	UHGV-0188143_22	PF12684,MF_03030,TIGR04328,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-0188143_23	phrog_6244	80.6	2.4e-23	N/A	unknown function
PHROG	UHGV-0188143_24	phrog_155	137.2	1.2e-40	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0188143_24	UniRef90_A0A1C5T8N6	251.0	0	ERF superfamily	N/A
eggNOG-mapper	UHGV-0188143_24	762982.HMPREF9442_00551	176.0	0	Erf family	N/A
Pfam	UHGV-0188143_24	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0188143_24	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
UniRef90	UHGV-0188143_30	UniRef90_A0A8G1TPP7	92.8	2.08e-23	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0188143_30	445972.ANACOL_00136	63.2	0.00000000000207	Cro/C1-type HTH DNA-binding domain	N/A
structural_annotation	UHGV-0188143_30	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0188143_31	K01356	64.2	2.2e-18	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0188143_31	phrog_4	125.1	6.6e-37	transcriptional repressor	transcription regulation
UniRef90	UHGV-0188143_31	UniRef90_A0A8G1TQH5	230.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0188143_31	1507.HMPREF0262_00168	179.0	0	Peptidase S24-like	N/A
Pfam	UHGV-0188143_31	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
Pfam	UHGV-0188143_31	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0188143_31	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0188143_31	PF00717,PF01381,MF_00015,NF041951,NF007621,COG2932	N/A	N/A	N/A	N/A
KOfam	UHGV-0188143_33	K06400	290.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0188143_33	phrog_95	297.7	0	integrase	integration and excision
UniRef90	UHGV-0188143_33	UniRef90_UPI001C11D960	307.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0188143_33	525254.HMPREF0072_1329	290.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0188143_33	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0188143_33	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0188143_33	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0188143_33	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0188143_34	693746.OBV_01590	152.0	1.05e-34	N/A	N/A
eggNOG-mapper	UHGV-0188143_35	1131462.DCF50_p1798	61.2	0.00000243	N/A	N/A
PHROG	UHGV-0188143_37	phrog_4105	69.5	4.5e-20	N/A	unknown function
eggNOG-mapper	UHGV-0188143_37	718252.FP2_06480	65.1	0.00000000000284	N/A	N/A
KOfam	UHGV-0188143_38	K01447	119.5	3.6e-35	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0188143_38	phrog_3088	255.8	0	amidase	lysis
UniRef90	UHGV-0188143_38	UniRef90_A0A3E3JYJ7	298.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0188143_38	428125.CLOLEP_01782	228.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0188143_38	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0188143_38	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0188143_38	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0188143_39	phrog_263	80.7	1e-23	holin	lysis
UniRef90	UHGV-0188143_39	UniRef90_R2QED9	93.6	8.18e-23	SPP1 family holin	N/A
eggNOG-mapper	UHGV-0188143_39	1158607.UAU_01779	93.6	1.37e-23	SPP1 phage holin	N/A
Pfam	UHGV-0188143_39	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-0188143_39	TIGR01592.1	N/A	N/A	phage holin	N/A
eggNOG-mapper	UHGV-0188143_41	1203606.HMPREF1526_01926	53.1	0.00000295	N/A	N/A
structural_annotation	UHGV-0188143_42	PF11192	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0188143_47	536233.CLO_1580	53.9	0.000000694	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0188143	Yes	25,730	36	65	1
UHGV-1488603	No	25,443	35	63	1
UHGV-0071677	No	19,446	35	49	1
UHGV-1790489	No	19,446	35	49	1