vOTU vOTU-022923

vOTU: vOTU-022923

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-022923
Number of genomes	3
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Fusicatenibacter → Fusicatenibacter saccharivorans
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00110 → vGENUS-00222 → vOTU-022923
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Fusicatenibacter → Fusicatenibacter saccharivorans
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0129391
Biosample ID	SAMEA37108168
Genome length (bp)	25,734 bps
CheckV completeness	62.40% (Medium-quality)
CDS count	44
CDS density	90.67%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Fusicatenibacter → Fusicatenibacter saccharivorans	Total connections	130	Host agreement	95.38
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Fusicatenibacter → Fusicatenibacter saccharivorans	Total connections	187	Host agreement	91.44

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 62.4)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0129391_1	phrog_1533	338.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0129391_1	UniRef90_A0A174PKR4	1217.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0129391_1	536233.CLO_2822	327.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0129391_1	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0129391_1	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0129391_1	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0129391_2	phrog_441	97.4	1.4e-28	tail assembly chaperone	tail
UniRef90	UHGV-0129391_2	UniRef90_A0A0K9N8J7	82.0	1.59e-17	N/A	N/A
eggNOG-mapper	UHGV-0129391_2	1232453.BAIF02000011_gene3366	112.0	2.74e-30	N/A	N/A
PHROG	UHGV-0129391_3	phrog_183	75.8	6e-22	tail chaperone protein	tail
UniRef90	UHGV-0129391_3	UniRef90_A0A174PQ19	239.0	0	N/A	N/A
eggNOG-mapper	UHGV-0129391_3	476272.RUMHYD_02861	140.0	2.57993e-41	Phage tail assembly chaperone protein, TAC	N/A
Pfam	UHGV-0129391_3	PF12363	N/A	N/A	Phage tail assembly chaperone protein, TAC	Phage_TAC_12
structural_annotation	UHGV-0129391_3	PF12363	N/A	N/A	N/A	N/A
PHROG	UHGV-0129391_4	phrog_238	178.1	0	major tail protein	tail
UniRef90	UHGV-0129391_4	UniRef90_A0A174PKY3	327.0	0	Phage major tail protein, TP901-1 family	N/A
eggNOG-mapper	UHGV-0129391_4	1235798.C817_03471	245.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0129391_4	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
NCBIFam	UHGV-0129391_4	TIGR02126.1	N/A	N/A	phage major tail protein, TP901-1 family	N/A
structural_annotation	UHGV-0129391_4	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0129391_5	phrog_176	87.2	1.7e-25	tail terminator	connector
UniRef90	UHGV-0129391_5	UniRef90_UPI001E62787A	192.0	0	N/A	N/A
eggNOG-mapper	UHGV-0129391_5	476272.RUMHYD_02859	177.0	0	N/A	N/A
PHROG	UHGV-0129391_6	phrog_5	86.4	4.3e-25	tail completion or Neck1 protein	connector
UniRef90	UHGV-0129391_6	UniRef90_A0A174PPX0	213.0	0	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0129391_6	476272.RUMHYD_02858	143.0	6.55808e-43	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0129391_6	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0129391_6	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0129391_6	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0129391_7	phrog_348	54.1	0.0000000000000033	minor head protein	head and packaging
eggNOG-mapper	UHGV-0129391_7	476272.RUMHYD_02857	124.0	1.26e-35	N/A	N/A
structural_annotation	UHGV-0129391_7	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0129391_8	phrog_132	85.9	3.4e-25	head-tail adaptor	connector
UniRef90	UHGV-0129391_8	UniRef90_A0A174PRY0	208.0	0	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0129391_8	476272.RUMHYD_02856	136.0	2.06001e-40	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0129391_8	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0129391_8	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-0129391_9	phrog_3673	68.4	7.9e-20	Arc-like repressor	transcription regulation
UniRef90	UHGV-0129391_9	UniRef90_UPI00189B7272	82.8	2.12e-19	Rho termination protein	N/A
eggNOG-mapper	UHGV-0129391_9	1197953.I6T7M8_9CAUD	68.2	0.000000000000025	DNA-dependent transcription, termination	N/A
PHROG	UHGV-0129391_10	phrog_544	124.2	1.2e-36	major head protein	head and packaging
UniRef90	UHGV-0129391_10	UniRef90_A0A174PKI4	772.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0129391_10	1232453.BAIF02000011_gene3359	628.0	0	N/A	N/A
Pfam	UHGV-0129391_10	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0129391_10	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0129391_11	phrog_172	164.7	0	head scaffolding protein	head and packaging
UniRef90	UHGV-0129391_11	UniRef90_UPI001D0541EB	250.0	0	N/A	N/A
eggNOG-mapper	UHGV-0129391_11	1232453.BAIF02000011_gene3358	150.0	1.58066e-42	N/A	N/A
Pfam	UHGV-0129391_11	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0129391_11	PF14265	N/A	N/A	N/A	N/A
KOfam	UHGV-0129391_12	K07584	71.7	1.3e-20	N/A	N/A
PHROG	UHGV-0129391_12	phrog_4478	92.1	3.5e-27	peptidase	other
UniRef90	UHGV-0129391_12	UniRef90_A0A417WXX2	193.0	0	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0129391_12	1232453.BAIF02000011_gene3357	141.0	8.66002e-43	Cysteine protease Prp	N/A
Pfam	UHGV-0129391_12	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0129391_12	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0129391_12	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0129391_13	phrog_478	117.8	5.3e-35	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0129391_13	UniRef90_R6R5K5	139.0	7e-40	Protein 64 protein	N/A
eggNOG-mapper	UHGV-0129391_13	1111121.HMPREF1247_0834	133.0	2.52e-38	N/A	N/A
PHROG	UHGV-0129391_14	phrog_1048	174.7	0	N/A	unknown function
UniRef90	UHGV-0129391_14	UniRef90_A0A417WXH0	358.0	0	N/A	N/A
eggNOG-mapper	UHGV-0129391_14	457412.RSAG_01107	261.0	0	N/A	N/A
Pfam	UHGV-0129391_14	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-0129391_14	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-0129391_14	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-0129391_15	phrog_918	132.1	1.1e-39	N/A	unknown function
UniRef90	UHGV-0129391_15	UniRef90_UPI00115A7D93	141.0	3.10948e-42	N/A	N/A
eggNOG-mapper	UHGV-0129391_15	1140001.I571_01827	132.0	3.2e-39	N/A	N/A
Pfam	UHGV-0129391_15	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0129391_15	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0129391_16	phrog_3675	83.0	2.3e-24	N/A	unknown function
UniRef90	UHGV-0129391_16	UniRef90_A0A173ZDX5	212.0	0	YjcQ protein	N/A
eggNOG-mapper	UHGV-0129391_16	1235796.C815_00922	150.0	1.4013e-45	YjcQ protein	N/A
Pfam	UHGV-0129391_16	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-0129391_16	PF09639,TIGR04176,COG1695	N/A	N/A	N/A	N/A
PHROG	UHGV-0129391_17	phrog_3675	109.8	1.1e-32	N/A	unknown function
UniRef90	UHGV-0129391_17	UniRef90_A0A174SAX8	223.0	0	YjcQ protein	N/A
eggNOG-mapper	UHGV-0129391_17	1118055.CAGU01000029_gene13	102.0	8.12e-27	YjcQ protein	N/A
Pfam	UHGV-0129391_17	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-0129391_17	PF09639,TIGR04176,COG2345	N/A	N/A	N/A	N/A
PHROG	UHGV-0129391_19	phrog_115	324.6	0	minor head protein	head and packaging
UniRef90	UHGV-0129391_19	UniRef90_A0A396P1E8	895.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0129391_19	476272.RUMHYD_02847	429.0	0	head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-0129391_19	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0129391_19	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0129391_19	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0129391_19	PF04233,PF18825,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0129391_20	phrog_64	373.1	0	portal protein	head and packaging
UniRef90	UHGV-0129391_20	UniRef90_A0A373P643	875.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0129391_20	1232453.BAIF02000011_gene3353	681.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-0129391_20	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0129391_20	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0129391_20	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-0129391_21	K06909	144.6	8.09951e-43	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0129391_21	phrog_10250	217.0	0	N/A	unknown function
UniRef90	UHGV-0129391_21	UniRef90_A0A373P5H0	916.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0129391_21	903814.ELI_3215	635.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0129391_21	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0129391_21	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0129391_21	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0129391_21	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0129391_22	phrog_1889	206.9	0	terminase small subunit	head and packaging
UniRef90	UHGV-0129391_22	UniRef90_A0A373P435	434.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0129391_22	33035.JPJF01000107_gene435	249.0	0	N/A	N/A
Pfam	UHGV-0129391_22	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
NCBIFam	UHGV-0129391_22	NF040601.1	N/A	N/A	phage terminase small subunit	N/A
COG	UHGV-0129391_22	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0129391_22	PF06056,NF040601,COG5484	N/A	N/A	N/A	N/A
PHROG	UHGV-0129391_24	phrog_36	78.0	1.4e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0129391_24	UniRef90_A0A174B4K2	265.0	0	RNA polymerase sigma factor, sigma-70 family	N/A
eggNOG-mapper	UHGV-0129391_24	1235799.C818_04213	104.0	1.25e-26	sigma factor activity	N/A
Pfam	UHGV-0129391_24	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-0129391_24	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0129391_24	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0129391_25	760568.Desku_0913	50.8	0.000000563	N/A	N/A
PHROG	UHGV-0129391_27	phrog_10469	306.8	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0129391_27	UniRef90_A0A174S3H8	387.0	0	Phage replisome organizer, putative, N-terminal region	N/A
eggNOG-mapper	UHGV-0129391_27	1567013.A0A0A7RTL4_9CAUD	256.0	0	calcium ion binding	N/A
Pfam	UHGV-0129391_27	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0129391_27	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
structural_annotation	UHGV-0129391_27	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
PHROG	UHGV-0129391_28	phrog_190	115.5	4.4e-34	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0129391_28	UniRef90_A0A416AFS0	139.0	5.19999e-40	N/A	N/A
eggNOG-mapper	UHGV-0129391_28	563031.HMPREF0666_01122	105.0	2.43e-27	N/A	N/A
Pfam	UHGV-0129391_28	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0129391_28	PF06356	N/A	N/A	N/A	N/A
KOfam	UHGV-0129391_29	K03111	136.2	3.7e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0129391_29	phrog_44	133.0	2.1e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0129391_29	UniRef90_A0A174S775	276.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0129391_29	622312.ROSEINA2194_04345	209.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0129391_29	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0129391_29	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0129391_29	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0129391_29	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0129391_29	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0129391_30	phrog_155	131.6	5.6e-39	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0129391_30	UniRef90_A0A174S6P0	472.0	0	ERF superfamily	N/A
eggNOG-mapper	UHGV-0129391_30	1304866.K413DRAFT_1196	199.0	0	ERF superfamily	N/A
Pfam	UHGV-0129391_30	PF04404	N/A	N/A	ERF superfamily	ERF
COG	UHGV-0129391_30	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0129391_30	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0129391_31	phrog_674	189.3	0	N/A	unknown function
UniRef90	UHGV-0129391_31	UniRef90_A0A416ZL44	475.0	0	N/A	N/A
eggNOG-mapper	UHGV-0129391_31	411460.RUMTOR_02065	208.0	0	N/A	N/A
Pfam	UHGV-0129391_31	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0129391_31	PF07083	N/A	N/A	N/A	N/A
Pfam	UHGV-0129391_34	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
eggNOG-mapper	UHGV-0129391_38	883156.HMPREF9282_01215	52.0	0.00000331	N/A	N/A
structural_annotation	UHGV-0129391_38	NF040556	N/A	N/A	N/A	N/A
KOfam	UHGV-0129391_40	K07741	118.3	1.5e-34	antB; anti-repressor protein	N/A
PHROG	UHGV-0129391_40	phrog_130	250.5	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0129391_40	UniRef90_UPI001C00F634	384.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0129391_40	33035.JPJF01000057_gene3118	263.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0129391_40	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0129391_40	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0129391_40	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0129391_40	PF03374,PF02498,TIGR02681,COG3617,COG3645	N/A	N/A	N/A	N/A
UniRef90	UHGV-0129391_41	UniRef90_A0A4S2AF05	90.1	2.54e-22	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0129391_41	768486.EHR_02785	77.8	3.57e-18	N/A	N/A
structural_annotation	UHGV-0129391_41	PF05339,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0129391_42	K22300	55.2	0.0000000000000017	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0129391_42	phrog_8	72.3	7.8e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-0129391_42	UniRef90_UPI001C127CAD	131.0	8.12e-38	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0129391_42	1163671.JAGI01000002_gene3058	92.0	2.7e-22	Helix-turn-helix domain protein	N/A
Pfam	UHGV-0129391_42	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0129391_42	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0129391_43	phrog_87	81.1	9.7e-24	metallo-protease	other
UniRef90	UHGV-0129391_43	UniRef90_A0A416P6H2	184.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0129391_43	1256908.HMPREF0373_00642	142.0	1.68002e-41	Zn peptidase	N/A
Pfam	UHGV-0129391_43	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0129391_43	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0129391_43	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0129391_44	K07451	52.4	0.0000000000000076	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0129391_44	phrog_16726	57.1	1.7e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0129391_44	UniRef90_A0A417WY54	657.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0129391_44	386415.NT01CX_1757	340.0	0	HNH endonuclease	N/A
Pfam	UHGV-0129391_44	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0129391_44	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0129391_44	PF01844,NF040563,COG1403	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0129391	Yes	25,734	45	62	1
UHGV-0070762	No	23,154	47	56	1
UHGV-0190035	No	22,036	47	53	1