vOTU vOTU-022925

vOTU: vOTU-022925

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-022925
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vOTU-022925
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1505558
Biosample ID	N/A
Genome length (bp)	33,469 bps
CheckV completeness	79.37% (Medium-quality)
CDS count	51
CDS density	93.41%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	344	Host agreement	97.67
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 79.37)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1505558_1	PF12270,NF040944	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1505558_2	PF09537	N/A	N/A	N/A	N/A
PHROG	UHGV-1505558_4	phrog_674	146.7	1.59748e-43	N/A	unknown function
UniRef90	UHGV-1505558_4	UniRef90_A0A3E2UDL3	399.0	0	N/A	N/A
eggNOG-mapper	UHGV-1505558_4	742722.HMPREF9463_00201	88.6	3.08e-17	N/A	N/A
Pfam	UHGV-1505558_4	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1505558_4	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-1505558_5	phrog_2760	184.7	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1505558_5	UniRef90_A0A3E2UDI4	403.0	0	Phage recombination protein Bet	N/A
eggNOG-mapper	UHGV-1505558_5	1235794.C811_01355	155.0	8.36575e-43	RecT family	N/A
Pfam	UHGV-1505558_5	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1505558_5	TIGR01913.1	N/A	N/A	phage recombination protein Bet	N/A
COG	UHGV-1505558_5	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1505558_5	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1505558_6	PF00436,MF_00720,NF004512,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-1505558_7	K02086	55.2	7.5e-16	dnaD; DNA replication protein	N/A
PHROG	UHGV-1505558_7	phrog_6251	189.4	0	replisome organizer DnaA-like	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1505558_7	UniRef90_UPI001CBE9731	190.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-1505558_7	447909.A6M985_9VIRU	148.0	4.13e-40	calcium ion binding	N/A
Pfam	UHGV-1505558_7	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-1505558_7	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
structural_annotation	UHGV-1505558_7	PF09681,PF07261,TIGR01714,TIGR01446,COG3935	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1505558_8	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-1505558_10	phrog_757	92.9	2.8e-27	DNA methyltransferase	other
UniRef90	UHGV-1505558_10	UniRef90_UPI001C00B13F	242.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1505558_10	748224.HMPREF9436_03069	178.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1505558_10	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-1505558_13	phrog_3136	126.9	5.3e-38	N/A	unknown function
UniRef90	UHGV-1505558_13	UniRef90_UPI001CBCD733	216.0	0	ASCH domain-containing protein	N/A
COG	UHGV-1505558_13	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1505558_13	PF12961,NF008917,COG4933	N/A	N/A	N/A	N/A
KOfam	UHGV-1505558_14	K01160	56.1	0.0000000000000011	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1505558_14	phrog_34	60.0	5.2e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1505558_14	UniRef90_A0A844DBG8	237.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1505558_14	875454.BAEW01000002_gene491	142.0	4.33982e-42	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1505558_14	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1505558_14	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1505558_14	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1505558_16	phrog_36	46.9	0.00000000000047	transcriptional regulator	transcription regulation
structural_annotation	UHGV-1505558_16	PF07374,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-1505558_17	UniRef90_U2R3C0	111.0	1.8e-28	Nascent polypeptide-associated complex domain protein	N/A
eggNOG-mapper	UHGV-1505558_17	1226322.HMPREF1545_00042	111.0	3.01e-29	N/A	N/A
structural_annotation	UHGV-1505558_17	PF04218	N/A	N/A	N/A	N/A
KOfam	UHGV-1505558_18	K06909	143.2	2.40042e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1505558_18	phrog_10250	173.9	0	N/A	unknown function
UniRef90	UHGV-1505558_18	UniRef90_A0A844D8I4	854.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1505558_18	411490.ANACAC_00783	493.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1505558_18	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-1505558_18	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-1505558_18	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1505558_18	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1505558_18	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1505558_19	phrog_64	124.8	3.3e-37	portal protein	head and packaging
UniRef90	UHGV-1505558_19	UniRef90_A0A6N7TNT3	867.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1505558_19	642492.Clole_2764	87.8	9.74e-16	phage portal protein, SPP1	N/A
Pfam	UHGV-1505558_19	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1505558_19	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1505558_21	phrog_2468	79.6	1.9e-23	head morphogenesis	head and packaging
UniRef90	UHGV-1505558_21	UniRef90_A0A844DBI4	600.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1505558_21	1504822.CCNO01000013_gene286	123.0	2.54e-28	cell adhesion	N/A
Pfam	UHGV-1505558_21	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-1505558_21	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1505558_21	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1505558_22	706437.HMPREF0813_02005	87.4	1.96e-20	N/A	N/A
PHROG	UHGV-1505558_23	phrog_8680	204.3	0	N/A	unknown function
UniRef90	UHGV-1505558_23	UniRef90_A0A844D688	447.0	0	N/A	N/A
eggNOG-mapper	UHGV-1505558_23	1423790.BN53_04265	176.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
Pfam	UHGV-1505558_23	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-1505558_23	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1505558_23	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-1505558_25	phrog_5	53.1	0.000000000000008	tail completion or Neck1 protein	connector
UniRef90	UHGV-1505558_25	UniRef90_A0A6N7TNP6	293.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1505558_25	1123309.AQYB01000018_gene814	95.5	3.52e-23	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1505558_25	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1505558_25	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1505558_27	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1505558_28	phrog_544	143.2	1.69978e-42	major head protein	head and packaging
UniRef90	UHGV-1505558_28	UniRef90_R0BKA1	433.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1505558_28	476272.RUMHYD_01776	323.0	0	N/A	N/A
structural_annotation	UHGV-1505558_28	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1505558_30	phrog_17977	49.5	0.000000000000066	N/A	unknown function
UniRef90	UHGV-1505558_30	UniRef90_A0A844DHJ8	238.0	0	Phage head closure protein	N/A
structural_annotation	UHGV-1505558_30	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1505558_31	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-1505558_32	phrog_885	56.3	4.1e-16	major tail protein	tail
eggNOG-mapper	UHGV-1505558_32	457396.CSBG_01054	56.6	0.00000046	Chitobiase/beta-hexosaminidase C-terminal domain	N/A
COG	UHGV-1505558_32	COG2273	N/A	N/A	Beta-glucanase, GH16 family	N/A
structural_annotation	UHGV-1505558_32	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1505558_35	phrog_9959	89.5	2e-26	tail length tape measure protein	tail
UniRef90	UHGV-1505558_35	UniRef90_A0A844DDD5	838.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-1505558_35	1492737.FEM08_12070	142.0	1.82e-32	tape measure	N/A
Pfam	UHGV-1505558_35	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1505558_35	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1505558_35	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1505558_35	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
UniRef90	UHGV-1505558_36	UniRef90_UPI001D3DB1A6	90.1	3.39e-18	phage tail family protein	N/A
eggNOG-mapper	UHGV-1505558_36	411490.ANACAC_00709	79.3	0.00000000000000641	phage tail	N/A
COG	UHGV-1505558_36	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1505558_36	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1505558_37	phrog_3558	194.0	0	tail protein	tail
UniRef90	UHGV-1505558_37	UniRef90_A0A3E2U3C8	169.0	1.76998e-41	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1505558_37	1235799.C818_04233	94.7	8.21e-18	Prophage endopeptidase tail	N/A
Pfam	UHGV-1505558_37	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-1505558_37	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1505558_37	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
KOfam	UHGV-1505558_38	K10804	57.5	1.2e-16	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	N/A
PHROG	UHGV-1505558_38	phrog_5240	82.1	4.8e-24	tail fiber protein	tail
eggNOG-mapper	UHGV-1505558_38	1410650.JHWL01000010_gene2723	72.0	0.000000000112	N/A	N/A
Pfam	UHGV-1505558_38	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
structural_annotation	UHGV-1505558_38	PF13472,NF007819,COG2755	N/A	N/A	N/A	N/A
KOfam	UHGV-1505558_39	K07273	167.4	0	acm; lysozyme	N/A
PHROG	UHGV-1505558_39	phrog_291	132.1	5e-39	endolysin	lysis
UniRef90	UHGV-1505558_39	UniRef90_UPI001D0EE7D8	301.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-1505558_39	748224.HMPREF9436_00154	282.0	0	hydrolase, family 25	N/A
Pfam	UHGV-1505558_39	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1505558_39	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1505558_39	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-1505558_41	phrog_15303	74.3	1.3e-21	N/A	unknown function
structural_annotation	UHGV-1505558_43	PF07374,MF_00245,NF001072,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1505558_44	phrog_3754	98.6	4.9e-29	N/A	unknown function
eggNOG-mapper	UHGV-1505558_44	1235790.C805_00054	110.0	1.84e-29	N/A	N/A
PHROG	UHGV-1505558_45	phrog_21718	106.9	1.7e-31	N/A	unknown function
eggNOG-mapper	UHGV-1505558_45	476272.RUMHYD_01768	67.4	0.00000000000308	N/A	N/A
PHROG	UHGV-1505558_46	phrog_374	221.6	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1505558_46	UniRef90_A0A7W0C2S3	206.0	0	Putative transcriptional regulator	N/A
eggNOG-mapper	UHGV-1505558_46	397290.C810_05173	211.0	0	N/A	N/A
PHROG	UHGV-1505558_48	phrog_16490	148.2	4.34403e-44	N/A	unknown function
eggNOG-mapper	UHGV-1505558_48	1408437.JNJN01000043_gene803	139.0	1.86e-37	N/A	N/A
PHROG	UHGV-1505558_49	phrog_20016	202.6	0	N/A	unknown function
UniRef90	UHGV-1505558_49	UniRef90_A0A285PT46	211.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1505558_49	1226322.HMPREF1545_00077	181.0	0	N/A	N/A
structural_annotation	UHGV-1505558_49	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1505558_50	476272.RUMHYD_01772	56.6	0.0000000487	N/A	N/A
structural_annotation	UHGV-1505558_50	PF12510	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1505558	Yes	33,469	53	79	1
UHGV-0068278	No	33,469	53	79	1
UHGV-1658163	No	18,507	53	44	1
UHGV-0190054	No	18,467	53	44	1