vOTU vOTU-023071

vOTU: vOTU-023071

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-023071
Number of genomes	3
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Enterocloster → Enterocloster citroniae
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-00589 → vGENUS-16895 → vOTU-023071
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Enterocloster
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1378285
Biosample ID	SAMN05827163
Genome length (bp)	36,215 bps
CheckV completeness	86.09% (Medium-quality)
CDS count	58
CDS density	95.75%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Enterocloster	Total connections	28	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Enterocloster → Enterocloster citroniae	Total connections	10	Host agreement	80

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 86.09)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1378285_1	K00689	41.5	0.0000000000045	E2.4.1.5; dextransucrase [EC:2.4.1.5]	N/A
PHROG	UHGV-1378285_1	phrog_7854	73.0	5.3e-21	endolysin	lysis
UniRef90	UHGV-1378285_1	UniRef90_A0A0F0CDM5	544.0	0	Autolysin	N/A
eggNOG-mapper	UHGV-1378285_1	1304866.K413DRAFT_1245	415.0	0	Putative cell wall binding repeat	N/A
Pfam	UHGV-1378285_1	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
Pfam	UHGV-1378285_1	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1378285_1	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-1378285_1	PF19127,PF05382,MF_00727,TIGR04035,NF033742,COG5263	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1378285_2	742733.HMPREF9469_00973	252.0	0	N/A	N/A
structural_annotation	UHGV-1378285_2	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-1378285_3	phrog_19695	68.8	1.3e-19	N/A	unknown function
eggNOG-mapper	UHGV-1378285_3	411462.DORLON_00772	90.1	5.09e-22	N/A	N/A
structural_annotation	UHGV-1378285_3	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-1378285_5	phrog_199	53.4	0.000000000000003	holin	lysis
UniRef90	UHGV-1378285_5	UniRef90_R0CKA9	290.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-1378285_5	1121333.JMLH01000047_gene1005	157.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1378285_5	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1378285_5	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-1378285_5	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1378285_7	phrog_19111	51.6	1.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-1378285_7	411902.CLOBOL_00121	135.0	3.45e-36	nuclear chromosome segregation	N/A
COG	UHGV-1378285_7	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1378285_7	PF17994,MF_00813,NF038128,COG5156	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1378285_8	411902.CLOBOL_00122	143.0	6.41935e-42	N/A	N/A
PHROG	UHGV-1378285_9	phrog_18725	51.7	0.000000000000016	N/A	unknown function
eggNOG-mapper	UHGV-1378285_9	411902.CLOBOL_00123	219.0	0	N/A	N/A
PHROG	UHGV-1378285_10	phrog_13879	212.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1378285_10	411902.CLOBOL_00124	1184.0	0	N/A	N/A
structural_annotation	UHGV-1378285_10	PF14594,PF21114,MF_00813,NF033848,TIGR02961,COG4379,COG4266	N/A	N/A	N/A	N/A
PHROG	UHGV-1378285_11	phrog_1194	58.4	1.1e-16	N/A	unknown function
eggNOG-mapper	UHGV-1378285_11	411902.CLOBOL_00125	247.0	0	N/A	N/A
structural_annotation	UHGV-1378285_11	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1378285_12	phrog_1535	264.3	0	tail length tape measure protein	tail
UniRef90	UHGV-1378285_12	UniRef90_A0A173WM72	164.0	1.65e-37	Phage-related protein	N/A
eggNOG-mapper	UHGV-1378285_12	411902.CLOBOL_00126	1376.0	0	N/A	N/A
COG	UHGV-1378285_12	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-1378285_13	phrog_706	135.6	3.09999e-40	N/A	unknown function
UniRef90	UHGV-1378285_13	UniRef90_A0A0F0CE18	365.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1378285_13	411902.CLOBOL_00127	350.0	0	N/A	N/A
Pfam	UHGV-1378285_13	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1378285_13	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1378285_14	phrog_11299	83.8	2.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-1378285_14	411902.CLOBOL_00128	239.0	0	N/A	N/A
structural_annotation	UHGV-1378285_14	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1378285_15	phrog_3099	168.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1378285_15	411902.CLOBOL_00129	298.0	0	N/A	N/A
structural_annotation	UHGV-1378285_15	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1378285_16	phrog_3266	114.9	4.5e-34	tail completion	connector
eggNOG-mapper	UHGV-1378285_16	411902.CLOBOL_00130	284.0	0	N/A	N/A
structural_annotation	UHGV-1378285_16	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1378285_17	phrog_556	85.0	4.2e-25	minor head protein	head and packaging
UniRef90	UHGV-1378285_17	UniRef90_UPI00189CE0C6	245.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1378285_17	411902.CLOBOL_00131	251.0	0	Minor capsid protein	N/A
Pfam	UHGV-1378285_17	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1378285_17	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1378285_18	phrog_3366	72.3	5e-21	N/A	unknown function
eggNOG-mapper	UHGV-1378285_18	411902.CLOBOL_00132	222.0	0	N/A	N/A
Pfam	UHGV-1378285_18	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1378285_18	PF20536,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1378285_19	phrog_541	94.8	7.1e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-1378285_19	411902.CLOBOL_00133	198.0	0	N/A	N/A
PHROG	UHGV-1378285_20	phrog_10	176.8	0	major head protein	head and packaging
UniRef90	UHGV-1378285_20	UniRef90_UPI000E438149	706.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1378285_20	411902.CLOBOL_00134	731.0	0	Phage capsid family	N/A
Pfam	UHGV-1378285_20	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1378285_20	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1378285_20	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1378285_20	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1378285_21	phrog_194	102.6	4.7e-30	head scaffolding protein	head and packaging
UniRef90	UHGV-1378285_21	UniRef90_UPI001923CA74	305.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1378285_21	411902.CLOBOL_00135	290.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1378285_21	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1378285_21	PF06810,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-1378285_23	phrog_581	307.4	0	minor head protein	head and packaging
UniRef90	UHGV-1378285_23	UniRef90_A0A3E2UZQ7	741.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1378285_23	411902.CLOBOL_00137	662.0	0	N/A	N/A
Pfam	UHGV-1378285_23	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1378285_23	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1378285_23	PF06152,PF04002	N/A	N/A	N/A	N/A
PHROG	UHGV-1378285_25	phrog_533	408.5	0	portal protein	head and packaging
UniRef90	UHGV-1378285_25	UniRef90_UPI0011062C56	831.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1378285_25	411902.CLOBOL_00138	848.0	0	N/A	N/A
Pfam	UHGV-1378285_25	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1378285_25	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1378285_26	K06909	64.5	1.5e-18	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1378285_26	phrog_2	86.8	4.3e-25	terminase large subunit	head and packaging
UniRef90	UHGV-1378285_26	UniRef90_A0A413B195	810.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1378285_26	411902.CLOBOL_00139	923.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-1378285_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1378285_26	PF04466,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1378285_27	K07474	116.2	4.4e-34	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1378285_27	phrog_2606	351.1	0	terminase small subunit	head and packaging
UniRef90	UHGV-1378285_27	UniRef90_UPI000E43164E	429.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-1378285_27	478749.BRYFOR_07604	345.0	0	terminase, small subunit	N/A
Pfam	UHGV-1378285_27	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
Pfam	UHGV-1378285_27	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1378285_27	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1378285_27	PF03592,PF10668,NF040601,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1378285_29	phrog_36	58.9	1.1e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1378285_29	UniRef90_R6ZAS5	187.0	0	GED domain-containing protein	N/A
eggNOG-mapper	UHGV-1378285_29	411902.CLOBOL_00148	271.0	0	N/A	N/A
structural_annotation	UHGV-1378285_29	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-1378285_30	phrog_16126	43.0	0.0000000000075	N/A	unknown function
PHROG	UHGV-1378285_36	phrog_15198	40.2	0.000000000017	N/A	unknown function
UniRef90	UHGV-1378285_36	UniRef90_G5HEP8	180.0	0	N/A	N/A
eggNOG-mapper	UHGV-1378285_36	742733.HMPREF9469_00921	180.0	0	N/A	N/A
Pfam	UHGV-1378285_36	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-1378285_42	phrog_8841	451.4	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1378285_42	UniRef90_A0A1C5TEU5	1238.0	0	Superfamily II helicase and inactivated derivatives	N/A
eggNOG-mapper	UHGV-1378285_42	742738.HMPREF9460_02495	436.0	0	N/A	N/A
Pfam	UHGV-1378285_42	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-1378285_42	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-1378285_42	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1378285_42	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
KOfam	UHGV-1378285_43	K02316	71.8	1.1e-20	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1378285_43	phrog_11992	159.0	0	N/A	unknown function
UniRef90	UHGV-1378285_43	UniRef90_A0A1C5TEL2	242.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-1378285_43	476272.RUMHYD_01741	149.0	1.90577e-43	CHC2 zinc finger	N/A
PADLOC	UHGV-1378285_43	drt-UG29	61.8	7.2e-18	DRT	DRT
Pfam	UHGV-1378285_43	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-1378285_43	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-1378285_43	PF01807	N/A	N/A	N/A	N/A
PHROG	UHGV-1378285_44	phrog_3490	120.4	1.3e-35	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1378285_44	UniRef90_A0A3D3U9X5	207.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1378285_44	397290.C810_05169	117.0	2.23e-31	ERCC4 domain	N/A
Pfam	UHGV-1378285_44	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-1378285_44	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-1378285_45	K03111	102.8	5.9e-30	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1378285_45	phrog_44	109.7	3.4e-32	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1378285_45	UniRef90_A0A3D3U8Y9	160.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1378285_45	861454.HMPREF9099_00348	92.4	3.45e-22	Single-strand binding protein family	N/A
Pfam	UHGV-1378285_45	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1378285_45	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1378285_45	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1378285_45	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1378285_45	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1378285_46	phrog_21613	102.1	4.8e-30	N/A	unknown function
eggNOG-mapper	UHGV-1378285_46	1120998.AUFC01000030_gene2214	164.0	0	N/A	N/A
KOfam	UHGV-1378285_47	K10906	82.4	6.6e-31	recE; exodeoxyribonuclease VIII [EC:3.1.11.-]	N/A
PHROG	UHGV-1378285_47	phrog_412	242.7	0	exonuclease VIII	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1378285_47	UniRef90_A0A2K3JBC0	345.0	0	N/A	N/A
eggNOG-mapper	UHGV-1378285_47	1122201.AUAZ01000055_gene153	135.0	2.06e-35	N/A	N/A
Pfam	UHGV-1378285_47	PF12684	N/A	N/A	N/A	DUF3799
structural_annotation	UHGV-1378285_47	PF12684,MF_03030,TIGR01896,COG2887	N/A	N/A	N/A	N/A
UniRef90	UHGV-1378285_48	UniRef90_R6RDX0	68.6	0.0000000000000658	Arginyl-tRNA synthetase	N/A
UniRef90	UHGV-1378285_52	UniRef90_A0A1C5TE40	48.1	0.00000589	Spondin domain-containing protein	N/A
UniRef90	UHGV-1378285_53	UniRef90_A0A3E2V5Q8	128.0	9e-38	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1378285_53	411902.CLOBOL_02552	99.4	7.88e-27	Helix-turn-helix domain	N/A
Pfam	UHGV-1378285_53	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-1378285_53	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
PHROG	UHGV-1378285_54	phrog_463	198.3	0	anti-repressor	transcription regulation
UniRef90	UHGV-1378285_54	UniRef90_A0A3E2V5D1	490.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-1378285_54	1304866.K413DRAFT_1188	281.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-1378285_54	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1378285_54	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-1378285_54	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1378285_54	PF10552,PF02498,NF033622,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-1378285_55	phrog_8	48.8	0.00000000000017	transcriptional regulator	transcription regulation
UniRef90	UHGV-1378285_55	UniRef90_A0A414AEG7	126.0	6.98e-37	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1378285_55	1304866.K413DRAFT_0833	112.0	6.8e-32	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1378285_55	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1378285_55	PF01381,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1378285_56	K22300	50.8	0.000000000000034	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1378285_56	phrog_8	69.8	5.6e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-1378285_56	UniRef90_A0A3E2V571	275.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1378285_56	411459.RUMOBE_00961	209.0	0	Bacteriophage CI repressor helix-turn-helix domain	N/A
Pfam	UHGV-1378285_56	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1378285_56	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-1378285_56	PF12844,MF_00584,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1378285_57	phrog_87	85.7	3.9e-25	metallo-protease	other
UniRef90	UHGV-1378285_57	UniRef90_A0A3E2V5J2	302.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1378285_57	476272.RUMHYD_01733	148.0	4.48416e-44	IrrE N-terminal-like domain	N/A
Pfam	UHGV-1378285_57	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1378285_57	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1378285_57	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-1378285_58	K03466	44.5	0.0000000000015	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	N/A
UniRef90	UHGV-1378285_58	UniRef90_UPI0019D1AD49	57.8	0.0000000981	DNA translocase FtsK	N/A
eggNOG-mapper	UHGV-1378285_58	1121267.JHZL01000003_gene415	72.8	0.00000000000111	Belongs to the FtsK SpoIIIE SftA family	N/A
Pfam	UHGV-1378285_58	PF01580	N/A	N/A	FtsK/SpoIIIE family	FtsK_SpoIIIE
COG	UHGV-1378285_58	COG1674	N/A	N/A	DNA segregation ATPase FtsK/SpoIIIE or related protein	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1378285	Yes	36,215	48	86	1
UHGV-0145018	No	32,184	47	77	1
UHGV-0194927	No	25,313	49	60	1