vOTU vOTU-023905

vOTU: vOTU-023905

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-023905
Number of genomes	4
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium → Clostridium disporicum
Taxonomy (UHGV)	vFAM-00114 → vSUBFAM-03921 → vOTU-023905
Host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium → Clostridium tertium
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0287153
Biosample ID	SAMN08122037
Genome length (bp)	26,056 bps
CheckV completeness	57.82% (Medium-quality)
CDS count	36
CDS density	89.58%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium → Clostridium tertium	Total connections	2	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium → Clostridium disporicum	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 57.82)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0287153_1	K03111	98.9	9e-29	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0287153_1	phrog_44	106.3	3.9e-31	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0287153_1	UniRef90_UPI00164AAD32	233.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0287153_1	545697.HMPREF0216_02833	195.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0287153_1	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0287153_1	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0287153_1	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0287153_1	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0287153_1	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0287153_2	1414720.CBYM010000001_gene681	387.0	0	N/A	N/A
UniRef90	UHGV-0287153_3	UniRef90_N9WF59	57.8	0.00000000638	MazG domain-containing protein	N/A
PHROG	UHGV-0287153_4	phrog_1672	97.6	1e-28	N/A	unknown function
UniRef90	UHGV-0287153_4	UniRef90_A0A3P6KCP8	125.0	7.52e-35	N/A	N/A
eggNOG-mapper	UHGV-0287153_4	632245.CLP_1632	125.0	1.3e-35	N/A	N/A
KOfam	UHGV-0287153_7	K04763	218.1	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0287153_7	phrog_1	178.7	0	integrase	integration and excision
UniRef90	UHGV-0287153_7	UniRef90_A0A1C6KY93	635.0	0	Tyrosine recombinase XerD	N/A
eggNOG-mapper	UHGV-0287153_7	1211817.CCAT010000049_gene2471	272.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0287153_7	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0287153_7	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0287153_7	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0287153_7	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0287153_8	931276.Cspa_c26680	93.6	1.53e-22	N/A	N/A
PHROG	UHGV-0287153_9	phrog_36	53.6	0.0000000000000039	transcriptional regulator	transcription regulation
UniRef90	UHGV-0287153_9	UniRef90_A0A174F044	253.0	0	N/A	N/A
eggNOG-mapper	UHGV-0287153_9	545697.HMPREF0216_02836	210.0	0	N/A	N/A
structural_annotation	UHGV-0287153_9	PF08281,MF_00245,NF001068,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0287153_10	1280692.AUJL01000025_gene2086	112.0	7.4e-32	N/A	N/A
PHROG	UHGV-0287153_11	phrog_17021	76.3	3.1e-22	N/A	unknown function
UniRef90	UHGV-0287153_11	UniRef90_Q8SBK6	61.2	0.0000000000315	Gp48 protein	N/A
PHROG	UHGV-0287153_13	phrog_606	86.9	2.1e-25	terminase small subunit	head and packaging
UniRef90	UHGV-0287153_13	UniRef90_A0A1I3PZ25	155.0	0	DNA-packaging protein gp3	N/A
eggNOG-mapper	UHGV-0287153_13	999411.HMPREF1092_03330	163.0	0	DNA-packaging protein gp3	N/A
Pfam	UHGV-0287153_13	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
KOfam	UHGV-0287153_14	K14060	80.7	2.5e-23	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0287153_14	phrog_125	151.1	5.60519e-45	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0287153_14	UniRef90_A0A1C6KYB1	407.0	0	Transposon Tn1000 resolvase	N/A
eggNOG-mapper	UHGV-0287153_14	1540257.JQMW01000013_gene749	282.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0287153_14	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0287153_14	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0287153_14	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0287153_15	phrog_10934	114.0	6.2e-34	N/A	unknown function
eggNOG-mapper	UHGV-0287153_15	565664.EFXG_02687	122.0	6.83e-36	N/A	N/A
KOfam	UHGV-0287153_16	K06909	398.4	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0287153_16	phrog_3717	250.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0287153_16	UniRef90_A0A1I3PY95	758.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0287153_16	1499683.CCFF01000005_gene64	711.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0287153_16	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0287153_16	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0287153_16	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0287153_16	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0287153_16	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0287153_17	phrog_64	293.9	0	portal protein	head and packaging
UniRef90	UHGV-0287153_17	UniRef90_A0A1C6KXQ6	866.0	0	Phage portal protein, SPP1 family	N/A
eggNOG-mapper	UHGV-0287153_17	1280692.AUJL01000004_gene853	743.0	0	portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0287153_17	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0287153_17	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0287153_18	phrog_115	131.9	3.9e-39	minor head protein	head and packaging
UniRef90	UHGV-0287153_18	UniRef90_UPI00164A61BC	479.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0287153_18	1499683.CCFF01000017_gene2578	263.0	0	head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-0287153_18	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0287153_18	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0287153_18	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0287153_18	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0287153_20	phrog_172	72.2	9.8e-21	head scaffolding protein	head and packaging
UniRef90	UHGV-0287153_20	UniRef90_UPI00189A475E	342.0	0	N/A	N/A
eggNOG-mapper	UHGV-0287153_20	1280692.AUJL01000004_gene848	322.0	0	N/A	N/A
Pfam	UHGV-0287153_20	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0287153_20	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0287153_21	phrog_909	76.7	2.9e-22	major head protein	head and packaging
UniRef90	UHGV-0287153_21	UniRef90_UPI001D2572A1	186.0	0	head decoration protein	N/A
eggNOG-mapper	UHGV-0287153_21	1280692.AUJL01000004_gene847	189.0	0	N/A	N/A
PHROG	UHGV-0287153_22	phrog_29	238.6	0	major head protein	head and packaging
UniRef90	UHGV-0287153_22	UniRef90_A0A1C6KXX0	621.0	0	Phage major capsid protein E	N/A
eggNOG-mapper	UHGV-0287153_22	1280692.AUJL01000004_gene846	629.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0287153_22	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0287153_22	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0287153_23	UniRef90_UPI00164B0099	162.0	0	collagen-like protein	N/A
COG	UHGV-0287153_23	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
UniRef90	UHGV-0287153_24	UniRef90_UPI0013C967CA	107.0	1.81e-28	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0287153_24	1540257.JQMW01000013_gene740	116.0	4.57e-33	N/A	N/A
PHROG	UHGV-0287153_25	phrog_3366	127.7	6.3e-38	N/A	unknown function
eggNOG-mapper	UHGV-0287153_25	1540257.JQMW01000013_gene739	223.0	0	N/A	N/A
Pfam	UHGV-0287153_25	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0287153_25	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0287153_26	phrog_556	78.5	7.8e-23	minor head protein	head and packaging
UniRef90	UHGV-0287153_26	UniRef90_A0A1C6KY51	240.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0287153_26	1280692.AUJL01000004_gene842	175.0	0	Minor capsid protein	N/A
Pfam	UHGV-0287153_26	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0287153_26	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0287153_27	phrog_3266	145.9	1.30321e-43	tail completion	connector
UniRef90	UHGV-0287153_27	UniRef90_A0A6I1NVN1	254.0	0	Chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0287153_27	1499683.CCFF01000017_gene2570	242.0	0	N/A	N/A
structural_annotation	UHGV-0287153_27	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0287153_28	phrog_3099	189.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0287153_28	1540257.JQMW01000013_gene736	246.0	0	N/A	N/A
structural_annotation	UHGV-0287153_28	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0287153_29	phrog_4450	98.6	5.9e-29	N/A	unknown function
UniRef90	UHGV-0287153_29	UniRef90_UPI00164AB2C6	220.0	0	AP endonuclease	N/A
eggNOG-mapper	UHGV-0287153_29	1280692.AUJL01000004_gene838	144.0	3.89561e-43	N/A	N/A
Pfam	UHGV-0287153_29	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-0287153_29	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0287153_30	phrog_706	173.7	0	N/A	unknown function
UniRef90	UHGV-0287153_30	UniRef90_UPI00164A4214	398.0	0	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0287153_30	1499683.CCFF01000017_gene2567	308.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0287153_30	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0287153_30	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0287153_31	phrog_5493	207.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0287153_31	UniRef90_UPI00164BC1C4	882.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-0287153_31	1540257.JQMW01000013_gene731	290.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0287153_31	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0287153_31	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0287153_31	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-0287153_32	phrog_33	75.0	1.7e-21	distal tail protein Dit	tail
UniRef90	UHGV-0287153_32	UniRef90_A0A1C6KY20	448.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0287153_32	573061.Clocel_0222	343.0	0	tail component	N/A
COG	UHGV-0287153_32	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0287153_32	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0287153_33	phrog_7043	370.7	0	tail protein	tail
UniRef90	UHGV-0287153_33	UniRef90_UPI00164B3F86	1234.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0287153_33	1499683.CCFF01000005_gene80	671.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0287153_33	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0287153_33	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0287153_33	COG4926	N/A	N/A	Phage-related protein	N/A
KOfam	UHGV-0287153_35	K10804	52.2	0.0000000000000094	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	N/A
PHROG	UHGV-0287153_35	phrog_5240	126.1	3.8e-37	tail fiber protein	tail
UniRef90	UHGV-0287153_35	UniRef90_UPI00164C13A9	1087.0	0	SGNH/GDSL hydrolase family protein	N/A
eggNOG-mapper	UHGV-0287153_35	1514668.JOOA01000002_gene1007	95.5	5.69e-18	PFAM GDSL-like Lipase Acylhydrolase	N/A
Pfam	UHGV-0287153_35	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
COG	UHGV-0287153_35	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
PHROG	UHGV-0287153_36	phrog_199	88.9	5.8e-26	holin	lysis
UniRef90	UHGV-0287153_36	UniRef90_A0A1C6KXX7	222.0	0	Phage-related holin (Lysis protein)	N/A
eggNOG-mapper	UHGV-0287153_36	1414720.CBYM010000040_gene1662	211.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0287153_36	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0287153_36	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0287153_36	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0287153_36	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0287153	Yes	26,056	30	58	1
UHGV-1756004	No	20,595	30	46	1
UHGV-0093007	No	20,049	30	45	1
UHGV-1828014	No	15,962	30	35	1