vOTU vOTU-024279

vOTU: vOTU-024279

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-024279
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-01637 → vOTU-024279
Host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium → Clostridium paraputrificum
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1447154
Biosample ID	SAMN01780040
Genome length (bp)	24,806 bps
CheckV completeness	61.20% (Medium-quality)
CDS count	35
CDS density	90.16%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Peptostreptococcaceae → Clostridioides → Clostridioides difficile_A	Total connections	1	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium → Clostridium paraputrificum	Total connections	5	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 61.2)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1447154_2	phrog_1863	62.7	3.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-1447154_2	1414720.CBYM010000001_gene713	82.8	2.09e-19	N/A	N/A
KOfam	UHGV-1447154_3	K16568	101.4	9.2e-30	exoZ; exopolysaccharide production protein ExoZ	N/A
PHROG	UHGV-1447154_3	phrog_3333	118.0	6.9e-35	O-acetyltransferase	other
UniRef90	UHGV-1447154_3	UniRef90_UPI001898B015	619.0	0	acyltransferase	N/A
eggNOG-mapper	UHGV-1447154_3	1121481.AUAS01000016_gene2634	146.0	6.52e-38	Acyltransferase family	N/A
Pfam	UHGV-1447154_3	PF01757	N/A	N/A	Acyltransferase family	Acyl_transf_3
COG	UHGV-1447154_3	COG1835	N/A	N/A	Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains	N/A
structural_annotation	UHGV-1447154_3	PF01757,MF_01066,NF042426,COG1835	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1447154_4	304371.MCP_2006	109.0	6.94e-23	extracellular matrix structural constituent	N/A
PHROG	UHGV-1447154_5	phrog_19519	91.9	3.7e-27	neck protein	connector
UniRef90	UHGV-1447154_5	UniRef90_UPI001896CF9D	765.0	0	BppU family phage baseplate upper protein	N/A
eggNOG-mapper	UHGV-1447154_5	936154.STP_1259	108.0	8.79e-22	lipolytic protein G-D-S-L family	N/A
COG	UHGV-1447154_5	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
PHROG	UHGV-1447154_6	phrog_6616	141.4	1.4013e-45	tail protein	tail
eggNOG-mapper	UHGV-1447154_6	1499683.CCFF01000014_gene3896	95.9	9.22e-18	Phage minor structural protein	N/A
COG	UHGV-1447154_6	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1447154_7	phrog_1194	123.5	8.3e-37	N/A	unknown function
UniRef90	UHGV-1447154_7	UniRef90_A0A4U9RD70	114.0	2.35e-30	Lj965 prophage protein	N/A
eggNOG-mapper	UHGV-1447154_7	1414720.CBYM010000002_gene561	125.0	7.46e-36	N/A	N/A
Pfam	UHGV-1447154_7	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1447154_7	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1447154_8	phrog_31409	386.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1447154_8	UniRef90_A0A7Z7G584	295.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1447154_8	1280689.AUJC01000003_gene976	853.0	0	phage tail tape measure protein	N/A
COG	UHGV-1447154_8	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1447154_8	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1447154_9	phrog_2066	49.6	0.000000000000038	N/A	unknown function
eggNOG-mapper	UHGV-1447154_9	1280689.AUJC01000003_gene975	211.0	0	N/A	N/A
PHROG	UHGV-1447154_10	phrog_183	76.5	3.8e-22	tail chaperone protein	tail
UniRef90	UHGV-1447154_10	UniRef90_UPI0006C0E497	224.0	0	N/A	N/A
eggNOG-mapper	UHGV-1447154_10	1280689.AUJC01000003_gene974	229.0	0	N/A	N/A
Pfam	UHGV-1447154_10	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-1447154_10	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-1447154_11	phrog_2546	80.4	3.3e-23	N/A	unknown function
UniRef90	UHGV-1447154_11	UniRef90_UPI0006C261E9	328.0	0	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1447154_11	1280689.AUJC01000003_gene973	113.0	5.73e-29	N/A	N/A
Pfam	UHGV-1447154_11	PF05154	N/A	N/A	TM2 domain	TM2
structural_annotation	UHGV-1447154_11	PF05154,PF02701,COG3478,COG2314	N/A	N/A	N/A	N/A
PHROG	UHGV-1447154_12	phrog_158	77.8	2e-22	major tail protein	tail
UniRef90	UHGV-1447154_12	UniRef90_UPI0006C6C404	281.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1447154_12	1280689.AUJC01000003_gene972	237.0	0	Phage tail tube protein, TTP	N/A
Pfam	UHGV-1447154_12	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-1447154_12	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1447154_13	phrog_78	59.4	7.1e-17	tail terminator	connector
eggNOG-mapper	UHGV-1447154_13	1280689.AUJC01000003_gene971	226.0	0	N/A	N/A
structural_annotation	UHGV-1447154_13	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1447154_14	phrog_5	113.7	1.6e-33	tail completion or Neck1 protein	connector
UniRef90	UHGV-1447154_14	UniRef90_UPI001B3C7E28	273.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1447154_14	1280689.AUJC01000003_gene970	320.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1447154_14	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1447154_14	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1447154_14	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1447154_15	phrog_2168	130.7	4.6e-39	N/A	unknown function
eggNOG-mapper	UHGV-1447154_15	1280689.AUJC01000003_gene969	200.0	0	N/A	N/A
structural_annotation	UHGV-1447154_15	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1447154_16	phrog_132	89.3	2.8e-26	head-tail adaptor	connector
UniRef90	UHGV-1447154_16	UniRef90_UPI000829FFA7	184.0	0	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1447154_16	1280689.AUJC01000003_gene968	188.0	0	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1447154_16	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1447154_16	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1447154_17	phrog_422	266.4	0	major head protein	head and packaging
UniRef90	UHGV-1447154_17	UniRef90_A0A8H9UTU9	508.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1447154_17	1280689.AUJC01000003_gene967	590.0	0	N/A	N/A
structural_annotation	UHGV-1447154_17	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1447154_18	phrog_172	173.0	0	head scaffolding protein	head and packaging
UniRef90	UHGV-1447154_18	UniRef90_UPI00189D679E	329.0	0	N/A	N/A
eggNOG-mapper	UHGV-1447154_18	1280689.AUJC01000003_gene966	361.0	0	N/A	N/A
Pfam	UHGV-1447154_18	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1447154_18	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1447154_20	phrog_115	335.7	0	minor head protein	head and packaging
UniRef90	UHGV-1447154_20	UniRef90_UPI001898B72B	640.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1447154_20	1280689.AUJC01000003_gene964	637.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-1447154_20	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1447154_20	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1447154_20	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1447154_20	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1447154_21	phrog_64	404.7	0	portal protein	head and packaging
UniRef90	UHGV-1447154_21	UniRef90_UPI000EA0DF01	820.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1447154_21	1280689.AUJC01000003_gene963	809.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1447154_21	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1447154_21	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1447154_21	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-1447154_22	K06909	360.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1447154_22	phrog_3717	163.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1447154_22	UniRef90_A0A1B8RSV7	855.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1447154_22	1280689.AUJC01000003_gene962	859.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1447154_22	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1447154_22	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1447154_22	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1447154_22	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1447154_22	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1447154_23	K07474	116.1	6e-34	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1447154_23	phrog_51	127.0	9.8e-38	terminase small subunit	head and packaging
UniRef90	UHGV-1447154_23	UniRef90_A0A1I2NUT6	227.0	0	Phage terminase small subunit	N/A
eggNOG-mapper	UHGV-1447154_23	1280692.AUJL01000027_gene2167	205.0	0	Terminase small subunit	N/A
Pfam	UHGV-1447154_23	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1447154_23	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1447154_23	PF03592,COG3728	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1447154_24	1280689.AUJC01000003_gene960	58.2	0.000000000404	N/A	N/A
structural_annotation	UHGV-1447154_24	PF10922,MF_00839	N/A	N/A	N/A	N/A
PHROG	UHGV-1447154_28	phrog_36	74.9	1e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-1447154_28	UniRef90_UPI0018A8ECDF	188.0	0	transcriptional regulator	N/A
eggNOG-mapper	UHGV-1447154_28	1391647.AVSV01000022_gene2550	144.0	1.93996e-41	N/A	N/A
NCBIFam	UHGV-1447154_28	TIGR01636.1	N/A	N/A	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-1447154_28	PF08281,MF_00245,NF001068,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-1447154_31	K00390	102.5	5e-30	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1447154_31	phrog_424	133.2	2e-39	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1447154_31	UniRef90_UPI000C086034	564.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1447154_31	1196322.A370_02048	372.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-1447154_31	BrxP_00001	86.4	3.7e-25	BrxP	BREX
Pfam	UHGV-1447154_31	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1447154_31	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1447154_31	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1447154_32	phrog_33582	76.8	2.1e-22	N/A	unknown function
structural_annotation	UHGV-1447154_32	PF01775,MF_00273,NF001981,COG2157	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1447154_33	NF009256	N/A	N/A	N/A	N/A
KOfam	UHGV-1447154_35	K03111	73.2	5.8e-21	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1447154_35	phrog_44	79.7	5.8e-23	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1447154_35	UniRef90_A0A1B8RSX1	171.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1447154_35	999411.HMPREF1092_03216	118.0	2.78e-33	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1447154_35	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1447154_35	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1447154_35	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1447154_35	PF00436,MF_00984,NF005242,COG0629	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1447154	Yes	24,806	30	61	1
UHGV-1806886	No	14,833	31	37	1
UHGV-0374551	No	12,239	31	31	1