vOTU vOTU-024434

vOTU: vOTU-024434

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-024434
Number of genomes	3
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00120 → vSUBFAM-06405 → vGENUS-16041 → vOTU-024434
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → CAG-390 → ERR7738170_bin.112
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1344956
Biosample ID	N/A
Genome length (bp)	121,444 bps
CheckV completeness	80.59% (Medium-quality)
CDS count	136
CDS density	92.28%
tRNA count	6
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → CAG-390 → ERR7738170_bin.112	Total connections	1	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 80.59)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1344956_5	K14440	212.2	0	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-1344956_5	phrog_62	280.7	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1344956_5	UniRef90_U2KY82	628.0	0	Protein, SNF2 family	N/A
eggNOG-mapper	UHGV-1344956_5	411473.RUMCAL_00324	628.0	0	SNF2 family	N/A
PADLOC	UHGV-1344956_5	ZorD1_00007	116.0	1.4013e-43	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-1344956_5	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-1344956_5	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1344956_5	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-1344956_5	PF00176,PF00271,PF07443,MF_01821,NF041790,TIGR01158,COG0553	N/A	N/A	N/A	N/A
KOfam	UHGV-1344956_7	K01449	44.1	0.0000000000036	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
UniRef90	UHGV-1344956_7	UniRef90_A0A843GRC0	80.5	0.00000000000000589	Cell wall hydrolase	N/A
Pfam	UHGV-1344956_7	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
COG	UHGV-1344956_7	COG3103	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1344956_7	TIGR02869,COG3773	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1344956_8	PF11031,MF_04104,NF041673,COG2203	N/A	N/A	N/A	N/A
PHROG	UHGV-1344956_11	phrog_20259	75.4	6.1e-22	N/A	unknown function
eggNOG-mapper	UHGV-1344956_11	1636182.A0A0F6R505_9CAUD	67.8	0.00000000000313	N/A	N/A
Pfam	UHGV-1344956_11	PF19474	N/A	N/A	N/A	DUF6011
structural_annotation	UHGV-1344956_11	PF19474	N/A	N/A	N/A	N/A
KOfam	UHGV-1344956_12	K07450	209.3	0	K07450; putative resolvase	N/A
PHROG	UHGV-1344956_12	phrog_6620	157.7	0	transposase	integration and excision
UniRef90	UHGV-1344956_12	UniRef90_A0A1V1NYV1	271.0	0	Site-specific integrase-resolvase	N/A
eggNOG-mapper	UHGV-1344956_12	491915.Aflv_2745	266.0	0	Resolvase, N-terminal domain	N/A
Pfam	UHGV-1344956_12	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
NCBIFam	UHGV-1344956_12	NF033518.0	N/A	N/A	IS607 family transposase	N/A
COG	UHGV-1344956_12	COG2452	N/A	N/A	Predicted site-specific integrase-resolvase	N/A
structural_annotation	UHGV-1344956_12	PF00239,PF12728,NF033518,COG2452	N/A	N/A	N/A	N/A
KOfam	UHGV-1344956_13	K07496	435.0	0	K07496; putative transposase	N/A
PHROG	UHGV-1344956_13	phrog_506	442.5	0	transposase	integration and excision
UniRef90	UHGV-1344956_13	UniRef90_A0A644YMY5	383.0	0	IS200/IS605 family transposase	N/A
eggNOG-mapper	UHGV-1344956_13	1541960.KQ78_00023	344.0	0	Transposase, IS605 OrfB family	N/A
PADLOC	UHGV-1344956_13	Type_V_V_U4	245.0	0	Cas12	CRISPR-CAS
Pfam	UHGV-1344956_13	PF12323	N/A	N/A	Helix-turn-helix domain	HTH_OrfB_IS605
Pfam	UHGV-1344956_13	PF01385	N/A	N/A	Probable transposase	OrfB_IS605
Pfam	UHGV-1344956_13	PF07282	N/A	N/A	Putative transposase DNA-binding domain	OrfB_Zn_ribbon
NCBIFam	UHGV-1344956_13	NF038281.1	N/A	N/A	IS200/IS605 family element RNA-guided endonuclease TnpB	N/A
COG	UHGV-1344956_13	COG0675	N/A	N/A	Transposase	N/A
structural_annotation	UHGV-1344956_13	PF07282,PF01385,NF038281,COG0675	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1344956_14	PF00210,MF_01441,NF006975,COG0783	N/A	N/A	N/A	N/A
UniRef90	UHGV-1344956_16	UniRef90_A0A2Z3EB26	78.2	0.0000000000000649	Neck protein	N/A
structural_annotation	UHGV-1344956_16	PF20387	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1344956_17	742818.HMPREF9451_01773	101.0	3.83e-22	N/A	N/A
eggNOG-mapper	UHGV-1344956_20	1341157.RF007C_13905	66.2	0.0000000000613	N/A	N/A
Pfam	UHGV-1344956_20	PF18907	N/A	N/A	N/A	DUF5662
structural_annotation	UHGV-1344956_20	PF18907	N/A	N/A	N/A	N/A
PHROG	UHGV-1344956_21	phrog_6721	282.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1344956_21	665956.HMPREF1032_00655	247.0	0	N/A	N/A
structural_annotation	UHGV-1344956_21	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-1344956_22	phrog_59	94.7	6.1e-28	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1344956_22	UniRef90_UPI00069D94E4	103.0	5.11e-24	NUMOD4 motif-containing HNH endonuclease	N/A
eggNOG-mapper	UHGV-1344956_22	1560342.A0A0A0RLM7_9CAUD	85.1	9.93e-18	sequence-specific DNA binding transcription factor activity	N/A
Pfam	UHGV-1344956_22	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1344956_22	PF02796,PF00847,TIGR02913	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1344956_24	PF09465,MF_01326_B,NF037951	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1344956_25	PF07068,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1344956_26	phrog_207	85.8	7e-26	head maturation protease	head and packaging
eggNOG-mapper	UHGV-1344956_26	869662.M4PQ72_9CAUD	73.2	0.00000000000529	Pfam:Peptidase_S77	N/A
structural_annotation	UHGV-1344956_26	PF03420,TIGR01543,COG3740	N/A	N/A	N/A	N/A
UniRef90	UHGV-1344956_30	UniRef90_U2M6A1	407.0	0	Phage tail protein	N/A
structural_annotation	UHGV-1344956_30	PF09684,TIGR02242,COG4385	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1344956_31	335543.Sfum_3832	75.9	0.0000000000132	homolog of phage Mu protein gp47	N/A
COG	UHGV-1344956_31	COG3299	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1344956_31	PF04865,PF21379,MF_04102,TIGR02243,COG3299	N/A	N/A	N/A	N/A
Pfam	UHGV-1344956_32	PF04965	N/A	N/A	Baseplate wedge protein gp25	GPW_gp25
structural_annotation	UHGV-1344956_32	PF04965,TIGR03357,COG3628	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1344956_34	PF21683,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1344956_35	phrog_7145	50.2	0.000000000000035	baseplate wedge subunit	tail
structural_annotation	UHGV-1344956_36	PF19266,TIGR01611,COG3499	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1344956_40	PF12322,COG4518	N/A	N/A	N/A	N/A
KOfam	UHGV-1344956_43	K00600	546.2	0	glyA, SHMT; glycine hydroxymethyltransferase [EC:2.1.2.1]	N/A
PHROG	UHGV-1344956_43	phrog_9968	414.6	0	methyltransferase	other
UniRef90	UHGV-1344956_43	UniRef90_A0A316L941	496.0	0	Serine hydroxymethyltransferase	N/A
eggNOG-mapper	UHGV-1344956_43	883109.HMPREF0380_01006	450.0	0	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism	N/A
Pfam	UHGV-1344956_43	PF00464	N/A	N/A	Serine hydroxymethyltransferase	SHMT
NCBIFam	UHGV-1344956_43	NF000586.1	N/A	N/A	serine hydroxymethyltransferase	N/A
COG	UHGV-1344956_43	COG0112	N/A	N/A	Glycine/serine hydroxymethyltransferase	N/A
HAMAP	UHGV-1344956_43	MF_00051	N/A	N/A	Serine hydroxymethyltransferase [glyA]	N/A
structural_annotation	UHGV-1344956_43	PF00464,MF_00051,NF000586,COG0112	N/A	N/A	N/A	N/A
PHROG	UHGV-1344956_45	phrog_3136	106.6	1.3e-31	N/A	unknown function
UniRef90	UHGV-1344956_45	UniRef90_A0A3D0HBD2	108.0	2.5e-26	ASCH domain-containing protein	N/A
COG	UHGV-1344956_45	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1344956_45	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1344956_46	469596.HMPREF9488_03216	51.2	0.00000787	N/A	N/A
UniRef90	UHGV-1344956_47	UniRef90_E7GEV8	65.5	0.00000000000223	SH3_15 domain-containing protein	N/A
PHROG	UHGV-1344956_48	phrog_4433	89.4	7.4e-29	N/A	unknown function
UniRef90	UHGV-1344956_48	UniRef90_UPI0015C58C2D	77.4	0.000000000000806	N/A	N/A
eggNOG-mapper	UHGV-1344956_48	886882.PPSC2_p0363	106.0	9.54e-24	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1344956_48	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-1344956_48	NF007410	N/A	N/A	N/A	N/A
PHROG	UHGV-1344956_49	phrog_1221	263.5	0	N/A	unknown function
UniRef90	UHGV-1344956_49	UniRef90_A0A6N9P0V0	374.0	0	N/A	N/A
eggNOG-mapper	UHGV-1344956_49	748224.HMPREF9436_03374	370.0	0	N/A	N/A
Pfam	UHGV-1344956_49	PF06067	N/A	N/A	N/A	DUF932
NCBIFam	UHGV-1344956_49	TIGR03299.1	N/A	N/A	phage/plasmid-like protein TIGR03299	N/A
structural_annotation	UHGV-1344956_49	PF06067,TIGR03299	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1344956_54	PF06841,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1344956_56	phrog_23	66.6	1e-19	tail sheath	tail
eggNOG-mapper	UHGV-1344956_56	1121406.JAEX01000043_gene718	67.8	0.00000000211	Phage tail sheath C-terminal domain	N/A
COG	UHGV-1344956_56	COG3497	N/A	N/A	Phage tail sheath protein FI	N/A
structural_annotation	UHGV-1344956_56	PF17541,PF17481,COG3497	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1344956_58	PF16724,TIGR01633,COG5003	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1344956_59	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1344956_62	UniRef90_A0A843GQG5	163.0	1.79e-40	Portal protein	N/A
Pfam	UHGV-1344956_62	PF07230	N/A	N/A	Bacteriophage T4-like portal protein (Gp20)	Portal_Gp20
structural_annotation	UHGV-1344956_62	PF07230,MF_04135,TIGR01538,COG5511	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1344956_63	411473.RUMCAL_00365	291.0	0	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA	N/A
Pfam	UHGV-1344956_63	PF00533	N/A	N/A	BRCA1 C Terminus (BRCT) domain	BRCT
COG	UHGV-1344956_63	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
structural_annotation	UHGV-1344956_63	PF00533,PF01653,MF_01588,TIGR00575,COG0272	N/A	N/A	N/A	N/A
UniRef90	UHGV-1344956_64	UniRef90_U2M6C5	496.0	0	INTEIN_C_TER domain-containing protein	N/A
eggNOG-mapper	UHGV-1344956_64	411473.RUMCAL_00366	496.0	0	N/A	N/A
structural_annotation	UHGV-1344956_64	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1344956_67	PF19380	N/A	N/A	N/A	N/A
PHROG	UHGV-1344956_71	phrog_18716	140.5	3.30006e-42	N/A	unknown function
UniRef90	UHGV-1344956_71	UniRef90_A0A372V803	167.0	0	N/A	N/A
eggNOG-mapper	UHGV-1344956_71	1029718.SFBM_0379	110.0	1.95e-28	N/A	N/A
Pfam	UHGV-1344956_71	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-1344956_71	PF18909	N/A	N/A	N/A	N/A
Pfam	UHGV-1344956_72	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
PHROG	UHGV-1344956_73	phrog_887	136.6	1.8e-40	queuine tRNA-ribosyltransferase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1344956_73	UniRef90_E7DN71	179.0	0	Queuosine tRNA-ribosyltransferase	N/A
eggNOG-mapper	UHGV-1344956_73	59241.E7DN71_BPDP1	179.0	0	tRNA modification	N/A
structural_annotation	UHGV-1344956_73	PF00290,MF_01634,TIGR00432,COG0343	N/A	N/A	N/A	N/A
KOfam	UHGV-1344956_74	K02341	57.4	1.1e-17	holB; DNA polymerase III subunit delta' [EC:2.7.7.7]	N/A
PHROG	UHGV-1344956_74	phrog_5846	60.9	1.8e-17	clamp loader of DNA polymerase	DNA, RNA and nucleotide metabolism
Pfam	UHGV-1344956_74	PF13177	N/A	N/A	DNA polymerase III, delta subunit	DNA_pol3_delta2
COG	UHGV-1344956_74	COG0470	N/A	N/A	DNA polymerase III, delta prime subunit	N/A
structural_annotation	UHGV-1344956_74	PF13177,MF_04162,NF004047,COG2812	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1344956_75	PF12169,PF06144,MF_01508,NF006301,COG2812	N/A	N/A	N/A	N/A
PHROG	UHGV-1344956_76	phrog_2002	54.3	0.0000000000000015	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-1344956_76	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-1344956_77	K03553	131.0	0	recA; recombination protein RecA	N/A
PHROG	UHGV-1344956_77	phrog_97	190.2	0	UvsX-like recombinase	other
UniRef90	UHGV-1344956_77	UniRef90_U2KYW9	473.0	0	Protein RecA	N/A
eggNOG-mapper	UHGV-1344956_77	411473.RUMCAL_00382	473.0	0	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage	N/A
Pfam	UHGV-1344956_77	PF00154	N/A	N/A	recA bacterial DNA recombination protein	RecA
COG	UHGV-1344956_77	COG0468	N/A	N/A	RecA/RadA recombinase	N/A
structural_annotation	UHGV-1344956_77	PF00154,MF_00268,TIGR02012,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-1344956_79	K02343	262.6	0	dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]	N/A
PHROG	UHGV-1344956_79	phrog_5846	255.0	0	clamp loader of DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1344956_79	UniRef90_U2KYD9	350.0	0	Putative DNA polymerase III, subunit gamma and tau	N/A
eggNOG-mapper	UHGV-1344956_79	411473.RUMCAL_00384	350.0	0	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity	N/A
Pfam	UHGV-1344956_79	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-1344956_79	PF13177	N/A	N/A	DNA polymerase III, delta subunit	DNA_pol3_delta2
NCBIFam	UHGV-1344956_79	TIGR02397.1	N/A	N/A	DNA polymerase III subunit gamma/tau	N/A
COG	UHGV-1344956_79	COG2812	N/A	N/A	DNA polymerase III, gamma/tau subunits	N/A
structural_annotation	UHGV-1344956_79	PF13177,PF12169,PF17864,MF_01509,NF004046,COG2812	N/A	N/A	N/A	N/A
PHROG	UHGV-1344956_80	phrog_1706	107.8	1.1e-31	CRISPR/Cas system associated	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1344956_80	UniRef90_A0A1U9WRA8	92.4	1.09e-18	RecB	N/A
eggNOG-mapper	UHGV-1344956_80	59241.E7DN75_BPDP1	92.0	2.58e-19	nuclease activity	N/A
structural_annotation	UHGV-1344956_80	PF01930,MF_03030,TIGR00372,COG5377	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1344956_81	PF00712,PF02768,MF_00317,TIGR00663,COG0592	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1344956_82	411473.RUMCAL_00387	192.0	0	intein-mediated protein splicing	N/A
COG	UHGV-1344956_82	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
UniRef90	UHGV-1344956_83	UniRef90_U2KYX3	454.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-1344956_83	411473.RUMCAL_00387	454.0	0	intein-mediated protein splicing	N/A
COG	UHGV-1344956_83	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
PHROG	UHGV-1344956_84	phrog_314	113.0	3.3e-33	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1344956_84	UniRef90_A0A7M1RX73	97.1	5.19e-21	Endonuclease	N/A
eggNOG-mapper	UHGV-1344956_84	1173135.I4DSI5_9CAUD	75.9	0.0000000000000646	endonuclease activity	N/A
Pfam	UHGV-1344956_84	PF07460	N/A	N/A	NUMOD3 motif	NUMOD3
NCBIFam	UHGV-1344956_84	TIGR01453.1	N/A	N/A	group I intron endonuclease	N/A
structural_annotation	UHGV-1344956_84	PF19835,PF07453,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-1344956_85	phrog_314	121.9	4.8e-36	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1344956_85	UniRef90_A0A6H0X6F7	103.0	1.36e-23	GIY-YIG endonuclease	N/A
eggNOG-mapper	UHGV-1344956_85	1541960.KQ78_01212	102.0	2e-23	NUMOD3 motif (2 copies)	N/A
PADLOC	UHGV-1344956_85	HEase_00030	43.7	0.0000000000093	homing endonuclease	RM
Pfam	UHGV-1344956_85	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
NCBIFam	UHGV-1344956_85	TIGR01453.1	N/A	N/A	group I intron endonuclease	N/A
structural_annotation	UHGV-1344956_85	PF19835,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-1344956_87	phrog_7545	86.4	3.4e-25	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1344956_87	UniRef90_C4ML45	142.0	1.35e-39	p45	N/A
eggNOG-mapper	UHGV-1344956_87	538979.C4ML45_9CAUD	142.0	2.27001e-40	HNH endonuclease	N/A
Pfam	UHGV-1344956_87	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1344956_87	PF13392,NF040595	N/A	N/A	N/A	N/A
KOfam	UHGV-1344956_88	K02335	120.1	2.4e-35	polA; DNA polymerase I [EC:2.7.7.7]	N/A
PHROG	UHGV-1344956_88	phrog_12241	163.4	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1344956_88	UniRef90_U2KFK5	516.0	0	DNA polymerase I	N/A
eggNOG-mapper	UHGV-1344956_88	411473.RUMCAL_00388	516.0	0	3-5 exonuclease	N/A
Pfam	UHGV-1344956_88	PF01612	N/A	N/A	3'-5' exonuclease	DNA_pol_A_exo1
Pfam	UHGV-1344956_88	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
COG	UHGV-1344956_88	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
structural_annotation	UHGV-1344956_88	PF01612,PF00476,MF_04101,NF004397,COG0749	N/A	N/A	N/A	N/A
PHROG	UHGV-1344956_89	phrog_14578	88.4	8.1e-26	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1344956_89	1128071.G9J3H4_9CAUD	62.8	0.000000003	N/A	N/A
structural_annotation	UHGV-1344956_89	PF08804	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1344956_90	NF006147	N/A	N/A	N/A	N/A
KOfam	UHGV-1344956_93	K02316	103.7	2e-30	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1344956_93	phrog_47	153.2	2.8026e-45	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1344956_93	UniRef90_U2M6E9	383.0	0	Toprim domain protein	N/A
eggNOG-mapper	UHGV-1344956_93	411473.RUMCAL_00391	383.0	0	Toprim-like	N/A
PADLOC	UHGV-1344956_93	drt-cluster192	53.4	1.2e-18	DRT	DRT
Pfam	UHGV-1344956_93	PF13155	N/A	N/A	Toprim-like	Toprim_2
COG	UHGV-1344956_93	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-1344956_93	PF13155,PF01807,PF08275,MF_00974,TIGR01391,COG0358	N/A	N/A	N/A	N/A
KOfam	UHGV-1344956_94	K02314	75.0	9.3e-22	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1344956_94	phrog_19	104.2	1.3e-30	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1344956_94	UniRef90_U2KYX7	457.0	0	SF4 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-1344956_94	411473.RUMCAL_00392	457.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-1344956_94	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1344956_94	COG0305	N/A	N/A	Replicative DNA helicase	N/A
eggNOG-mapper	UHGV-1344956_95	1341157.RF007C_02465	278.0	0	N/A	N/A
structural_annotation	UHGV-1344956_98	MF_00962,NF005644,COG1191	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1344956_99	PF06067,TIGR03299	N/A	N/A	N/A	N/A
PHROG	UHGV-1344956_100	phrog_8113	43.5	0.0000000000057	N/A	unknown function
UniRef90	UHGV-1344956_100	UniRef90_U2M6G8	119.0	2.55e-32	KTSC domain-containing protein	N/A
eggNOG-mapper	UHGV-1344956_100	1147094.H6X3W2_9CAUD	55.5	0.00000004	KTSC domain	N/A
Pfam	UHGV-1344956_100	PF13619	N/A	N/A	KTSC domain	KTSC
KOfam	UHGV-1344956_102	K11991	105.1	9.2e-31	tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]	N/A
PHROG	UHGV-1344956_102	phrog_174	45.3	0.00000000000096	dCMP deaminase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1344956_102	UniRef90_A0A1G5E0F2	173.0	0	tRNA(Arg) A34 adenosine deaminase TadA	N/A
eggNOG-mapper	UHGV-1344956_102	1123009.AUID01000009_gene490	154.0	1.4013e-45	MafB19-like deaminase	N/A
Pfam	UHGV-1344956_102	PF00383	N/A	N/A	Cytidine and deoxycytidylate deaminase zinc-binding region	dCMP_cyt_deam_1
COG	UHGV-1344956_102	COG0590	N/A	N/A	tRNA(Arg) A34 adenosine deaminase TadA	N/A
structural_annotation	UHGV-1344956_102	PF14437,MF_00972,NF008113,COG0590	N/A	N/A	N/A	N/A
KOfam	UHGV-1344956_103	K00059	103.1	9.7e-31	fabG, OAR1; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]	N/A
PHROG	UHGV-1344956_103	phrog_3142	54.1	4.2e-16	FabG-like 3-oxoacyl-(acyl-carrier-protein) reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1344956_103	UniRef90_A0A0X8FLF6	246.0	0	Dehydrogenase	N/A
eggNOG-mapper	UHGV-1344956_103	1121115.AXVN01000079_gene2742	215.0	0	Enoyl-(Acyl carrier protein) reductase	N/A
Pfam	UHGV-1344956_103	PF13561	N/A	N/A	Enoyl-(Acyl carrier protein) reductase	adh_short_C2
COG	UHGV-1344956_103	COG1028	N/A	N/A	NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family	N/A
structural_annotation	UHGV-1344956_103	PF13561,MF_01647,NF005474,COG1028	N/A	N/A	N/A	N/A
KOfam	UHGV-1344956_104	K09125	97.3	1.7e-28	yhhQ; queuosine precursor transporter	N/A
UniRef90	UHGV-1344956_104	UniRef90_UPI00048001FA	270.0	0	VUT family protein	N/A
eggNOG-mapper	UHGV-1344956_104	1392487.JIAD01000001_gene770	270.0	0	Putative vitamin uptake transporter	N/A
Pfam	UHGV-1344956_104	PF02592	N/A	N/A	Putative vitamin uptake transporter	Vut_1
COG	UHGV-1344956_104	COG1738	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1344956_104	PF02592,MF_02088,TIGR00697,COG1738	N/A	N/A	N/A	N/A
PHROG	UHGV-1344956_105	phrog_443	64.4	2.8e-18	holin	lysis
UniRef90	UHGV-1344956_105	UniRef90_UPI0009883463	77.8	5.83e-17	holin	N/A
eggNOG-mapper	UHGV-1344956_105	1469948.JPNB01000002_gene3855	71.2	0.00000000000000372	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1344956_105	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
KOfam	UHGV-1344956_106	K22409	96.6	2e-28	sle1; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1344956_106	phrog_5182	162.8	0	endolysin	lysis
UniRef90	UHGV-1344956_106	UniRef90_A0A4R7LCK1	290.0	0	LysM domain-containing protein	N/A
eggNOG-mapper	UHGV-1344956_106	397288.C806_00777	248.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-1344956_106	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1344956_106	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-1344956_106	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1344956_106	PF01510,PF18342,MF_04111,COG5632	N/A	N/A	N/A	N/A
Pfam	UHGV-1344956_107	PF11133	N/A	N/A	Head fiber protein	Phage_head_fibr
UniRef90	UHGV-1344956_108	UniRef90_R7HJQ7	103.0	3.72e-19	Leucine-rich repeat (LRR) protein	N/A
eggNOG-mapper	UHGV-1344956_108	518635.BIFANG_02133	95.9	3.27e-17	hydrolase, family 25	N/A
Pfam	UHGV-1344956_108	PF09479	N/A	N/A	Listeria-Bacteroides repeat domain (List_Bact_rpt)	Flg_new
NCBIFam	UHGV-1344956_108	TIGR02543.1	N/A	N/A	TIGR02543 family repeat protein	N/A
COG	UHGV-1344956_108	COG3209	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1344956_109	443143.GM18_1557	65.9	0.000000018	repeat protein	N/A
Pfam	UHGV-1344956_109	PF09479	N/A	N/A	Listeria-Bacteroides repeat domain (List_Bact_rpt)	Flg_new
COG	UHGV-1344956_109	COG3391	N/A	N/A	DNA-binding beta-propeller fold protein YncE	N/A
structural_annotation	UHGV-1344956_109	PF09479,NF033188	N/A	N/A	N/A	N/A
KOfam	UHGV-1344956_111	K01104	42.5	0.0000000000054	E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]	N/A
UniRef90	UHGV-1344956_111	UniRef90_UPI001BF10870	194.0	0	Tyrosine-protein phosphatase	N/A
eggNOG-mapper	UHGV-1344956_111	33169.AAS53972	66.6	0.000000016	Saccharomyces cerevisiae YDL057w	N/A
Pfam	UHGV-1344956_111	PF13350	N/A	N/A	Tyrosine phosphatase family	Y_phosphatase3
COG	UHGV-1344956_111	COG1073	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1344956_111	PF13350,TIGR01244,COG2365	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1344956_113	459495.SPLC1_S103340	92.4	1.25e-16	tail collar domain protein	N/A
COG	UHGV-1344956_113	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-1344956_114	PF20010	N/A	N/A	N/A	N/A
PHROG	UHGV-1344956_115	phrog_35541	69.3	6.8e-23	N/A	unknown function
structural_annotation	UHGV-1344956_117	PF09643,NF000331	N/A	N/A	N/A	N/A
KOfam	UHGV-1344956_118	K01972	336.2	0	E6.5.1.2, ligA, ligB; DNA ligase (NAD+) [EC:6.5.1.2]	N/A
PHROG	UHGV-1344956_118	phrog_3869	389.5	0	NAD-dependent DNA ligase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1344956_118	UniRef90_A0A127AYW8	275.0	0	DNA ligase (NAD(+))	N/A
eggNOG-mapper	UHGV-1344956_118	1201288.M900_2812	206.0	0	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA	N/A
Pfam	UHGV-1344956_118	PF01653	N/A	N/A	NAD-dependent DNA ligase adenylation domain	DNA_ligase_aden
Pfam	UHGV-1344956_118	PF03120	N/A	N/A	NAD-dependent DNA ligase OB-fold domain	DNA_ligase_OB
COG	UHGV-1344956_118	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
structural_annotation	UHGV-1344956_118	PF01653,PF03120,PF00533,MF_01588,NF005932,COG0272	N/A	N/A	N/A	N/A
UniRef90	UHGV-1344956_122	UniRef90_UPI001BC83CBE	132.0	8.17e-36	SLOG family protein	N/A
eggNOG-mapper	UHGV-1344956_122	411473.RUMCAL_00299	142.0	5.7201e-42	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids	N/A
COG	UHGV-1344956_122	COG0593	N/A	N/A	Chromosomal replication initiation ATPase DnaA	N/A
eggNOG-mapper	UHGV-1344956_123	411462.DORLON_00233	96.7	1.3e-23	N/A	N/A
KOfam	UHGV-1344956_127	K06283	42.3	0.000000000000017	spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D	N/A
Pfam	UHGV-1344956_127	PF12116	N/A	N/A	Stage III sporulation protein D	SpoIIID
KOfam	UHGV-1344956_128	K07571	64.7	1.4e-18	K07571; S1 RNA binding domain protein	N/A
UniRef90	UHGV-1344956_128	UniRef90_H1LGN4	60.1	0.0000000147	S1 RNA binding domain protein	N/A
eggNOG-mapper	UHGV-1344956_128	334390.LAF_0218	58.9	0.00000000802	RNA binding	N/A
Pfam	UHGV-1344956_128	PF00575	N/A	N/A	S1 RNA binding domain	S1
COG	UHGV-1344956_128	COG1098	N/A	N/A	Predicted RNA-binding protein, contains ribosomal protein S1 (RPS1) domain	N/A
structural_annotation	UHGV-1344956_128	PF00575,MF_00975,NF040578,COG1098	N/A	N/A	N/A	N/A
KOfam	UHGV-1344956_129	K19171	102.1	3.9e-30	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-1344956_129	phrog_77	107.3	9.3e-32	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1344956_129	UniRef90_U2M633	248.0	0	Putative DNA sulfur modification protein DndD	N/A
eggNOG-mapper	UHGV-1344956_129	913865.DOT_5661	63.5	0.000000143	AAA domain	N/A
Pfam	UHGV-1344956_129	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-1344956_129	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-1344956_129	PF13166,MF_00449,NF002244,COG0419	N/A	N/A	N/A	N/A
KOfam	UHGV-1344956_130	K03657	277.5	0	uvrD, pcrA; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]	N/A
PHROG	UHGV-1344956_130	phrog_1967	249.4	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1344956_130	UniRef90_U2KYN9	318.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-1344956_130	411473.RUMCAL_00297	318.0	0	ATP-dependent DNA helicase	N/A
PADLOC	UHGV-1344956_130	GajB_00020	167.1	0	UrvD helicase	Gabija
Pfam	UHGV-1344956_130	PF00580	N/A	N/A	UvrD/REP helicase N-terminal domain	UvrD-helicase
Pfam	UHGV-1344956_130	PF13361	N/A	N/A	UvrD-like helicase C-terminal domain	UvrD_C
COG	UHGV-1344956_130	COG0210	N/A	N/A	Superfamily I DNA or RNA helicase	N/A
structural_annotation	UHGV-1344956_133	PF18065	N/A	N/A	N/A	N/A
KOfam	UHGV-1344956_134	K03698	46.4	0.00000000000068	cbf, cbf1; 3'-5' exoribonuclease [EC:3.1.-.-]	N/A
PHROG	UHGV-1344956_134	phrog_28876	105.6	3.5e-31	metal-dependent phosphohydrolase	other
UniRef90	UHGV-1344956_134	UniRef90_A0A7G9WJU9	139.0	6.4e-37	Hydrolase	N/A
eggNOG-mapper	UHGV-1344956_134	411473.RUMCAL_00307	181.0	0	metal-dependent phosphohydrolase, HD sub domain	N/A
COG	UHGV-1344956_134	COG3481	N/A	N/A	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	N/A
structural_annotation	UHGV-1344956_134	PF07514,MF_01427,TIGR03760,COG3481	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1344956	Yes	121,444	42	81	1
UHGV-0599461	No	83,329	42	55	1
UHGV-0537228	No	39,106	42	25	1