vOTU vOTU-024525

vOTU: vOTU-024525

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-024525
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00005 → vGENUS-00485 → vOTU-024525
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1353422
Biosample ID	SAMN07646487
Genome length (bp)	30,564 bps
CheckV completeness	72.79% (Medium-quality)
CDS count	46
CDS density	90.31%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	187	Host agreement	83.96
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	5	Host agreement	80

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 72.79)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1353422_1	K07319	74.4	1.5e-21	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-1353422_1	phrog_498	358.4	0	DNA methyltransferase	other
UniRef90	UHGV-1353422_1	UniRef90_R5GWS3	405.0	0	DNA (Cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1353422_1	1423758.BN55_01455	347.0	0	DNA methylase	N/A
PADLOC	UHGV-1353422_1	MTase_II_00015	240.5	0	Type II methyltransferase	RM
Pfam	UHGV-1353422_1	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1353422_1	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1353422_1	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1353422_1	PF02195,PF05869,MF_02015,TIGR00180,TIGR01712,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-1353422_3	K06909	385.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1353422_3	phrog_3717	163.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-1353422_3	UniRef90_A0A2U1BEH4	751.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1353422_3	33035.JPJF01000106_gene3136	458.0	0	Terminase small subunit	N/A
Pfam	UHGV-1353422_3	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1353422_3	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1353422_3	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1353422_3	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1353422_3	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1353422_4	phrog_533	396.4	0	portal protein	head and packaging
UniRef90	UHGV-1353422_4	UniRef90_A0A2U1BEK0	701.0	0	A118 family predicted phage portal protein	N/A
eggNOG-mapper	UHGV-1353422_4	1226322.HMPREF1545_00044	665.0	0	N/A	N/A
Pfam	UHGV-1353422_4	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1353422_4	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1353422_6	phrog_9479	140.1	1.10002e-41	N/A	unknown function
eggNOG-mapper	UHGV-1353422_6	1514668.JOOA01000002_gene2680	56.2	0.0000000268	N/A	N/A
structural_annotation	UHGV-1353422_6	PF15529	N/A	N/A	N/A	N/A
PHROG	UHGV-1353422_7	phrog_8680	223.9	0	N/A	unknown function
UniRef90	UHGV-1353422_7	UniRef90_A0A3R6D7I3	266.0	0	N/A	N/A
eggNOG-mapper	UHGV-1353422_7	411470.RUMGNA_02208	239.0	0	N/A	N/A
Pfam	UHGV-1353422_7	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-1353422_7	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-1353422_8	phrog_581	283.4	0	minor head protein	head and packaging
UniRef90	UHGV-1353422_8	UniRef90_UPI001D080D49	571.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1353422_8	1226322.HMPREF1545_00046	375.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1353422_8	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1353422_8	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1353422_8	PF06152	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1353422_9	PF18152	N/A	N/A	N/A	N/A
PHROG	UHGV-1353422_10	phrog_194	91.1	1.5e-26	head scaffolding protein	head and packaging
UniRef90	UHGV-1353422_10	UniRef90_A0A2Z4Q9Y8	125.0	1.31e-32	Minor structural protein	N/A
eggNOG-mapper	UHGV-1353422_10	1232443.BAIA02000078_gene31	93.6	1.71e-21	N/A	N/A
Pfam	UHGV-1353422_10	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1353422_10	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1353422_11	phrog_212	269.0	0	major head protein	head and packaging
UniRef90	UHGV-1353422_11	UniRef90_A0A2V2FIN1	497.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1353422_11	935836.JAEL01000021_gene1494	347.0	0	N/A	N/A
structural_annotation	UHGV-1353422_11	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1353422_12	phrog_541	107.4	8.1e-32	head-tail adaptor	connector
eggNOG-mapper	UHGV-1353422_12	642492.Clole_0822	68.2	0.00000000000101	N/A	N/A
PHROG	UHGV-1353422_13	phrog_3366	91.4	9.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-1353422_13	1226322.HMPREF1545_00053	152.0	2.8026e-45	N/A	N/A
structural_annotation	UHGV-1353422_13	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1353422_14	phrog_556	79.2	4.4e-23	minor head protein	head and packaging
UniRef90	UHGV-1353422_14	UniRef90_UPI00195E1497	186.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1353422_14	1226322.HMPREF1545_00054	155.0	0	Minor capsid protein	N/A
Pfam	UHGV-1353422_14	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1353422_14	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1353422_15	phrog_3266	60.5	2.7e-17	tail completion	connector
UniRef90	UHGV-1353422_15	UniRef90_A0A2Z4QA01	125.0	2.16e-34	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1353422_15	1232443.BAIA02000078_gene24	184.0	0	N/A	N/A
structural_annotation	UHGV-1353422_15	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1353422_16	phrog_3099	88.1	1.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-1353422_16	1226322.HMPREF1545_00056	247.0	0	N/A	N/A
structural_annotation	UHGV-1353422_16	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1353422_17	phrog_11299	71.1	1.8e-20	N/A	unknown function
eggNOG-mapper	UHGV-1353422_17	693746.OBV_18160	146.0	2.67648e-43	N/A	N/A
structural_annotation	UHGV-1353422_17	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1353422_18	phrog_706	115.4	4.8e-34	N/A	unknown function
UniRef90	UHGV-1353422_18	UniRef90_UPI000682A80B	224.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1353422_18	693746.OBV_18170	215.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1353422_18	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1353422_18	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1353422_19	phrog_806	83.8	2.2e-24	N/A	unknown function
UniRef90	UHGV-1353422_19	UniRef90_A0A212ITM5	215.0	0	Telomeric repeat-binding factor 2	N/A
eggNOG-mapper	UHGV-1353422_19	476272.RUMHYD_01730	158.0	0	N/A	N/A
Pfam	UHGV-1353422_19	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-1353422_19	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-1353422_19	PF11611,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
KOfam	UHGV-1353422_20	K03529	42.9	0.0000000000021	smc; chromosome segregation protein	N/A
PHROG	UHGV-1353422_20	phrog_1535	125.5	0	tail length tape measure protein	tail
UniRef90	UHGV-1353422_20	UniRef90_A0A810PX76	337.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1353422_20	1235797.C816_04182	291.0	0	SLT domain	N/A
COG	UHGV-1353422_20	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1353422_20	PF16789,TIGR02473	N/A	N/A	N/A	N/A
PHROG	UHGV-1353422_21	phrog_1194	52.6	0.0000000000000073	N/A	unknown function
eggNOG-mapper	UHGV-1353422_21	60520.HR47_13415	50.1	0.00000469	N/A	N/A
structural_annotation	UHGV-1353422_21	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1353422_22	phrog_22212	44.8	0.00000000000042	N/A	unknown function
eggNOG-mapper	UHGV-1353422_22	1235797.C816_04180	98.6	4.51e-22	N/A	N/A
structural_annotation	UHGV-1353422_22	PF21683,TIGR02126,COG4379	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1353422_23	1235797.C816_04179	87.8	4.95e-16	Chaperone of endosialidase	N/A
structural_annotation	UHGV-1353422_23	PF13550,NF041249,COG4926	N/A	N/A	N/A	N/A
UniRef90	UHGV-1353422_24	UniRef90_A0A8D9PDX6	132.0	2.79e-38	Zinc-finger double domain protein	N/A
structural_annotation	UHGV-1353422_24	PF07238	N/A	N/A	N/A	N/A
PHROG	UHGV-1353422_26	phrog_38044	55.3	2.3e-16	N/A	unknown function
eggNOG-mapper	UHGV-1353422_26	1139219.I569_01368	75.5	0.0000000000301	Phage minor structural protein	N/A
COG	UHGV-1353422_26	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1353422_26	PF19079	N/A	N/A	N/A	N/A
PHROG	UHGV-1353422_27	phrog_4105	99.6	1.8e-29	N/A	unknown function
UniRef90	UHGV-1353422_27	UniRef90_A0A8D9UHA9	144.0	9.58488e-43	Holin protein	N/A
eggNOG-mapper	UHGV-1353422_27	742733.HMPREF9469_05011	120.0	7.31e-34	N/A	N/A
PHROG	UHGV-1353422_28	phrog_881	90.3	1e-26	holin	lysis
UniRef90	UHGV-1353422_28	UniRef90_UPI00189D3A4F	85.1	2.28e-20	phage holin	N/A
eggNOG-mapper	UHGV-1353422_28	742740.HMPREF9474_02251	82.0	7.04e-20	Putative phage holin Dp-1	N/A
Pfam	UHGV-1353422_28	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-1353422_28	PF16938	N/A	N/A	N/A	N/A
KOfam	UHGV-1353422_29	K01448	49.0	0.000000000000089	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1353422_29	phrog_1493	73.1	4.9e-21	endolysin	lysis
UniRef90	UHGV-1353422_29	UniRef90_A0A3D5TEB1	202.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1353422_29	742738.HMPREF9460_01415	81.6	0.00000000000000155	Bacterial SH3 domain	N/A
Pfam	UHGV-1353422_29	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-1353422_29	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1353422_29	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1353422_29	PF01520,PF01471,MF_00562,TIGR02883,TIGR03979,COG0860,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-1353422_31	phrog_3754	116.7	1.6e-34	N/A	unknown function
eggNOG-mapper	UHGV-1353422_31	1226322.HMPREF1545_00073	171.0	0	N/A	N/A
PHROG	UHGV-1353422_32	phrog_21718	107.4	1.2e-31	N/A	unknown function
eggNOG-mapper	UHGV-1353422_32	397290.C810_05210	73.6	0.0000000000000258	N/A	N/A
PHROG	UHGV-1353422_33	phrog_22984	84.4	9.6e-25	N/A	unknown function
PHROG	UHGV-1353422_34	phrog_16490	141.1	3.36312e-44	N/A	unknown function
eggNOG-mapper	UHGV-1353422_34	658655.HMPREF0988_00917	127.0	4.33e-33	N/A	N/A
PHROG	UHGV-1353422_35	phrog_20016	180.1	0	N/A	unknown function
UniRef90	UHGV-1353422_35	UniRef90_A0A285PT46	194.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1353422_35	397290.C810_05214	160.0	0	N/A	N/A
structural_annotation	UHGV-1353422_35	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1353422_36	phrog_28802	67.6	1.4e-19	N/A	unknown function
structural_annotation	UHGV-1353422_36	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1353422_37	1226322.HMPREF1545_00079	89.0	1.44e-21	N/A	N/A
KOfam	UHGV-1353422_38	K06400	286.4	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1353422_38	phrog_95	285.2	0	integrase	integration and excision
UniRef90	UHGV-1353422_38	UniRef90_A0A1C6HT72	370.0	0	Resolvase, N terminal domain	N/A
eggNOG-mapper	UHGV-1353422_38	357809.Cphy_2997	276.0	0	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-1353422_38	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1353422_38	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1353422_38	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1353422_38	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-1353422_39	UniRef90_A0A8D9UHA6	299.0	0	Helix-turn-helix XRE-family like protein	N/A
Pfam	UHGV-1353422_39	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1353422_39	PF12844,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1353422_40	K07448	117.6	9.6e-35	mrr; restriction system protein	N/A
PHROG	UHGV-1353422_40	phrog_19856	53.6	0.0000000000000027	N/A	unknown function
UniRef90	UHGV-1353422_40	UniRef90_A0A2Z4Q9W7	244.0	0	Restriction endonuclease	N/A
eggNOG-mapper	UHGV-1353422_40	397290.C810_01426	162.0	4.90454e-44	Restriction endonuclease	N/A
PADLOC	UHGV-1353422_40	ZorD1_00005	66.1	4.2e-19	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-1353422_40	PF09397	N/A	N/A	Ftsk gamma domain	FtsK_gamma
Pfam	UHGV-1353422_40	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-1353422_40	COG1674	N/A	N/A	DNA segregation ATPase FtsK/SpoIIIE or related protein	N/A
structural_annotation	UHGV-1353422_40	PF04471,NF002876,COG1787	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1353422_42	1519439.JPJG01000061_gene1989	53.5	0.00000013	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1353422_42	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1353422_42	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1353422_42	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1353422_43	phrog_8	43.2	0.0000000000088	transcriptional regulator	transcription regulation
UniRef90	UHGV-1353422_43	UniRef90_A0A328UFC2	69.7	0.0000000000000258	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1353422_43	411460.RUMTOR_02056	49.3	0.00000218	Bacteriophage CI repressor helix-turn-helix domain	N/A
Pfam	UHGV-1353422_43	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1353422_43	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-1353422_43	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1353422	Yes	30,564	52	73	1
UHGV-1073637	No	30,564	52	73	1
UHGV-1203909	No	21,025	52	50	1
UHGV-1088430	No	15,302	53	36	1