vOTU vOTU-024578

vOTU: vOTU-024578

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-024578
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00005 → vGENUS-00484 → vOTU-024578
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1313782
Biosample ID	SAMEA3951678
Genome length (bp)	29,675 bps
CheckV completeness	73.40% (Medium-quality)
CDS count	59
CDS density	92.06%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	107	Host agreement	90.65
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 73.4)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1313782_1	phrog_5	57.3	4.1e-16	tail completion or Neck1 protein	connector
UniRef90	UHGV-1313782_1	UniRef90_A0A4D7AJK9	178.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1313782_1	1280685.AUKC01000004_gene1630	95.1	3.31e-23	N/A	N/A
structural_annotation	UHGV-1313782_1	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1313782_2	PF18152	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1313782_3	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1313782_4	phrog_544	294.9	0	major head protein	head and packaging
UniRef90	UHGV-1313782_4	UniRef90_UPI0019576143	395.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1313782_4	411471.SUBVAR_06940	381.0	0	N/A	N/A
NCBIFam	UHGV-1313782_4	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1313782_4	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1313782_6	phrog_17977	80.4	1.5e-23	N/A	unknown function
UniRef90	UHGV-1313782_6	UniRef90_UPI00141211AB	94.4	1.18e-22	head-tail adaptor protein	N/A
structural_annotation	UHGV-1313782_6	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1313782_7	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1313782_8	phrog_885	86.4	2.9e-25	major tail protein	tail
UniRef90	UHGV-1313782_8	UniRef90_A0A843J9F0	209.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1313782_8	1504822.CCNO01000012_gene492	247.0	0	N/A	N/A
structural_annotation	UHGV-1313782_8	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1313782_9	UniRef90_A0A285PXU7	72.0	0.00000000000015	Consensus disorder prediction	N/A
PHROG	UHGV-1313782_11	phrog_7115	121.6	4.2e-36	N/A	unknown function
UniRef90	UHGV-1313782_11	UniRef90_A0A810PSE6	226.0	0	bPH_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1313782_11	1514668.JOOA01000002_gene2950	206.0	0	Bacterial PH domain	N/A
Pfam	UHGV-1313782_11	PF08000	N/A	N/A	Bacterial PH domain	bPH_1
structural_annotation	UHGV-1313782_11	PF08000,MF_00437	N/A	N/A	N/A	N/A
PHROG	UHGV-1313782_12	phrog_6900	250.1	0	tail length tape measure protein	tail
UniRef90	UHGV-1313782_12	UniRef90_A0A3D1JBH2	257.0	0	Phage tail protein (Fragment)	N/A
eggNOG-mapper	UHGV-1313782_12	1499683.CCFF01000017_gene2565	295.0	0	tape measure	N/A
COG	UHGV-1313782_12	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1313782_12	PF20155,COG3941	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1313782_13	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1313782_14	phrog_13879	517.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1313782_14	1235797.C816_02659	722.0	0	N/A	N/A
structural_annotation	UHGV-1313782_14	PF14594,PF06588,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1313782_15	PF00354	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1313782_16	PF13620,NF040788,COG2512	N/A	N/A	N/A	N/A
PHROG	UHGV-1313782_18	phrog_1382	42.6	0.0000000000045	N/A	unknown function
eggNOG-mapper	UHGV-1313782_18	1336234.JAGN01000004_gene512	54.3	0.00000000599	N/A	N/A
PHROG	UHGV-1313782_19	phrog_1863	63.0	2.8e-18	N/A	unknown function
eggNOG-mapper	UHGV-1313782_19	748224.HMPREF9436_01412	101.0	1.71e-27	N/A	N/A
PHROG	UHGV-1313782_20	phrog_13256	71.6	6.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-1313782_20	1226322.HMPREF1545_00132	71.2	0.00000000000000135	N/A	N/A
PHROG	UHGV-1313782_22	phrog_18955	58.9	5.7e-17	N/A	unknown function
UniRef90	UHGV-1313782_22	UniRef90_UPI00164D2830	375.0	0	phosphodiester glycosidase family protein	N/A
eggNOG-mapper	UHGV-1313782_22	696281.Desru_3652	54.3	0.00000774	exopolysaccharide biosynthesis protein	N/A
Pfam	UHGV-1313782_22	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
COG	UHGV-1313782_22	COG4632	N/A	N/A	Sugar-P-sugar glycosidase (uncovering enzyme, UCE), NAGPA superfamily	N/A
structural_annotation	UHGV-1313782_22	PF09992,COG4632	N/A	N/A	N/A	N/A
KOfam	UHGV-1313782_23	K08640	100.3	3.4e-29	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-1313782_23	phrog_894	103.9	2e-30	endolysin	lysis
UniRef90	UHGV-1313782_23	UniRef90_K1TJK4	217.0	0	Peptidase_M15_3 domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-1313782_23	1235797.C816_04171	206.0	0	Peptidase M15	N/A
Pfam	UHGV-1313782_23	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-1313782_23	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1313782_23	PF05951,COG3108	N/A	N/A	N/A	N/A
UniRef90	UHGV-1313782_25	UniRef90_R6DRH1	108.0	2.65e-26	Putative TnpX site-specific recombinase	N/A
eggNOG-mapper	UHGV-1313782_25	742738.HMPREF9460_00886	135.0	6.66e-38	N/A	N/A
structural_annotation	UHGV-1313782_25	PF09889,COG4068	N/A	N/A	N/A	N/A
PHROG	UHGV-1313782_26	phrog_25567	48.4	0.00000000000014	N/A	unknown function
UniRef90	UHGV-1313782_26	UniRef90_UPI00164AED9E	117.0	4.37e-32	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1313782_26	1235798.C817_04600	89.7	8.6e-22	N/A	N/A
Pfam	UHGV-1313782_26	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1313782_26	NF040522,COG2944	N/A	N/A	N/A	N/A
PHROG	UHGV-1313782_29	phrog_3754	110.2	1.6e-32	N/A	unknown function
eggNOG-mapper	UHGV-1313782_29	1226322.HMPREF1545_00073	164.0	0	N/A	N/A
PHROG	UHGV-1313782_30	phrog_21718	103.8	1.6e-30	N/A	unknown function
eggNOG-mapper	UHGV-1313782_30	397290.C810_05210	72.4	0.0000000000000715	N/A	N/A
PHROG	UHGV-1313782_31	phrog_22984	84.2	9.3e-25	N/A	unknown function
PHROG	UHGV-1313782_32	phrog_16490	145.0	8.54792e-44	N/A	unknown function
eggNOG-mapper	UHGV-1313782_32	1408437.JNJN01000043_gene803	152.0	8.37976e-43	N/A	N/A
PHROG	UHGV-1313782_33	phrog_20016	168.1	0	N/A	unknown function
UniRef90	UHGV-1313782_33	UniRef90_A0A2Z4QB67	160.0	0	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-1313782_33	1226322.HMPREF1545_00077	149.0	2.10195e-44	N/A	N/A
structural_annotation	UHGV-1313782_33	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1313782_34	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1313782_35	1232443.BAIA02000078_gene6	55.8	0.0000000149	N/A	N/A
KOfam	UHGV-1313782_36	K06400	289.1	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1313782_36	phrog_95	302.7	0	integrase	integration and excision
UniRef90	UHGV-1313782_36	UniRef90_A0A3A9I9T1	349.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-1313782_36	357809.Cphy_2997	296.0	0	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-1313782_36	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1313782_36	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1313782_36	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1313782_36	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
Pfam	UHGV-1313782_37	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1313782_37	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-1313782_37	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1313782_40	phrog_585	81.2	1e-23	N/A	unknown function
UniRef90	UHGV-1313782_40	UniRef90_UPI00129D2984	79.0	4.32e-16	N/A	N/A
eggNOG-mapper	UHGV-1313782_40	1423755.BAML01000004_gene410	68.6	0.000000000000776	N/A	N/A
Pfam	UHGV-1313782_40	PF10711	N/A	N/A	N/A	DUF2513
structural_annotation	UHGV-1313782_40	PF10711,TIGR04176,COG1695	N/A	N/A	N/A	N/A
UniRef90	UHGV-1313782_41	UniRef90_UPI0018976583	97.4	1.4e-23	helix-turn-helix domain-containing protein	N/A
COG	UHGV-1313782_41	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-1313782_41	PF12844,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1313782_42	UniRef90_U2BKK8	72.4	0.00000000000000213	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1313782_42	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1313782_42	PF13560,NF040507,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1313782_43	phrog_2657	151.6	4.2039e-45	transcriptional regulator	transcription regulation
UniRef90	UHGV-1313782_43	UniRef90_UPI0019674AC1	291.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1313782_43	293826.Amet_4052	283.0	0	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-1313782_43	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-1313782_43	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-1313782_43	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1313782_43	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1313782_47	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-1313782_49	phrog_4973	43.5	0.0000000000052	N/A	unknown function
UniRef90	UHGV-1313782_49	UniRef90_A0A3D3Y5F2	64.3	0.00000000000434	DNA-binding protein	N/A
Pfam	UHGV-1313782_49	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-1313782_49	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
PHROG	UHGV-1313782_50	phrog_253	85.1	1e-24	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1313782_50	UniRef90_A0A1C5N4H2	142.0	1.63e-40	Siphovirus Gp157	N/A
eggNOG-mapper	UHGV-1313782_50	1410670.JHXF01000015_gene2268	94.0	3.21e-22	Siphovirus Gp157	N/A
Pfam	UHGV-1313782_50	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1313782_50	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-1313782_51	phrog_155	123.1	2.5e-36	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1313782_51	UniRef90_A0A3D1PJF8	229.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1313782_51	1304866.K413DRAFT_1196	200.0	0	ERF superfamily	N/A
Pfam	UHGV-1313782_51	PF04404	N/A	N/A	ERF superfamily	ERF
COG	UHGV-1313782_51	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1313782_51	PF04404,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1313782_52	phrog_72	67.3	2e-19	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1313782_52	UniRef90_A0A8D9PDS2	182.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-1313782_52	445972.ANACOL_01825	148.0	4.24593e-43	N/A	N/A
structural_annotation	UHGV-1313782_52	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1313782_53	phrog_7370	57.6	2e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1313782_53	UniRef90_UPI001C122365	132.0	7.21e-38	HNH endonuclease	N/A
Pfam	UHGV-1313782_53	PF01844	N/A	N/A	HNH endonuclease	HNH
KOfam	UHGV-1313782_54	K03111	152.9	2.8026e-45	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1313782_54	phrog_44	151.8	4.2039e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1313782_54	UniRef90_A0A1C5QDM6	209.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1313782_54	1226322.HMPREF1545_04080	209.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1313782_54	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1313782_54	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1313782_54	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1313782_54	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1313782_54	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1313782_55	phrog_2149	69.6	5.9e-20	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1313782_55	UniRef90_A0A417QFV0	105.0	8.54e-24	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-1313782_55	742740.HMPREF9474_03117	185.0	0	N/A	N/A
structural_annotation	UHGV-1313782_55	PF01978,NF000243,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-1313782_57	K01160	41.9	0.000000000027	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1313782_57	phrog_4632	65.5	6.8e-20	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1313782_57	UniRef90_A0A7X8IB41	117.0	1.76e-31	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1313782_57	469604.HMPREF0946_00819	63.9	0.0000000000202	N/A	N/A
structural_annotation	UHGV-1313782_57	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-1313782_59	K00558	87.1	1.7e-25	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1313782_59	phrog_116	94.7	7.8e-28	DNA methyltransferase	other
UniRef90	UHGV-1313782_59	UniRef90_K1R461	214.0	0	DNA-cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1313782_59	665956.HMPREF1032_02671	183.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1313782_59	oMTase_00004	137.0	2.2e-40	orphan methyltransferase	RM
Pfam	UHGV-1313782_59	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1313782_59	COG0270	N/A	N/A	DNA-cytosine methylase	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1313782	Yes	29,675	55	73	1
UHGV-1479437	No	29,675	55	73	1
UHGV-1555926	No	11,439	53	28	1
UHGV-0144976	No	10,876	56	27	1