vOTU vOTU-024778

vOTU: vOTU-024778

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-024778
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-00662 → vGENUS-03088 → vOTU-024778
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Ruminococcus_D → Ruminococcus_D bicirculans
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2036022
Biosample ID	N/A
Genome length (bp)	25,463 bps
CheckV completeness	71.87% (Medium-quality)
CDS count	36
CDS density	96.39%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Ruminococcus_D → Ruminococcus_D bicirculans	Total connections	427	Host agreement	97.19
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Ruminococcus_D → Ruminococcus_D bicirculans	Total connections	884	Host agreement	99.66

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 71.87)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2036022_2	phrog_4575	114.6	8e-34	N/A	unknown function
eggNOG-mapper	UHGV-2036022_2	575615.HMPREF0670_02458	58.5	0.0000000593	N/A	N/A
KOfam	UHGV-2036022_3	K07273	218.5	0	acm; lysozyme	N/A
PHROG	UHGV-2036022_3	phrog_291	181.4	0	endolysin	lysis
UniRef90	UHGV-2036022_3	UniRef90_A0A1C6IMI8	492.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-2036022_3	246199.CUS_5914	303.0	0	hydrolase, family 25	N/A
Pfam	UHGV-2036022_3	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-2036022_3	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-2036022_3	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-2036022_3	PF01183,PF01476,TIGR02899,COG3757,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-2036022_4	phrog_1863	58.3	3.5e-17	N/A	unknown function
eggNOG-mapper	UHGV-2036022_4	1226322.HMPREF1545_04027	71.6	0.00000000000000223	N/A	N/A
PHROG	UHGV-2036022_5	phrog_13256	79.3	2.7e-23	N/A	unknown function
eggNOG-mapper	UHGV-2036022_5	1160721.RBI_II00522	93.2	1.79e-24	N/A	N/A
PHROG	UHGV-2036022_6	phrog_134	41.5	0.000000000018	N/A	unknown function
UniRef90	UHGV-2036022_6	UniRef90_A0A373VFP4	98.6	3.23e-26	XkdX family protein	N/A
eggNOG-mapper	UHGV-2036022_6	1298920.KI911353_gene543	57.0	0.000000000146	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-2036022_6	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-2036022_6	PF09693,TIGR01669	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2036022_8	1410617.JHXH01000006_gene232	82.8	0.000000000000086	N/A	N/A
structural_annotation	UHGV-2036022_8	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-2036022_10	phrog_9680	54.5	7.1e-17	host range and adsorption protein	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-2036022_10	1160721.RBI_II00526	513.0	0	N/A	N/A
structural_annotation	UHGV-2036022_10	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-2036022_11	phrog_1194	89.3	3.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-2036022_11	1160721.RBI_II00527	205.0	0	N/A	N/A
structural_annotation	UHGV-2036022_11	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2036022_12	phrog_1535	312.1	0	tail length tape measure protein	tail
UniRef90	UHGV-2036022_12	UniRef90_R6TDK7	1273.0	0	Phage-related protein-like protein	N/A
eggNOG-mapper	UHGV-2036022_12	1226322.HMPREF1545_00059	398.0	0	tape measure	N/A
COG	UHGV-2036022_12	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-2036022_12	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-2036022_13	phrog_706	148.4	3.92364e-44	N/A	unknown function
UniRef90	UHGV-2036022_13	UniRef90_UPI001B3C82AE	213.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-2036022_13	1449050.JNLE01000003_gene3882	201.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-2036022_13	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-2036022_13	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2036022_14	phrog_11299	185.6	0	N/A	unknown function
structural_annotation	UHGV-2036022_14	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-2036022_15	phrog_3099	147.4	7.14662e-44	N/A	unknown function
eggNOG-mapper	UHGV-2036022_15	1160721.RBI_II00532	206.0	0	N/A	N/A
structural_annotation	UHGV-2036022_15	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2036022_16	phrog_3266	120.8	6.8e-36	tail completion	connector
eggNOG-mapper	UHGV-2036022_16	411902.CLOBOL_00130	110.0	4.35e-29	N/A	N/A
structural_annotation	UHGV-2036022_16	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-2036022_17	phrog_556	123.8	6e-37	minor head protein	head and packaging
UniRef90	UHGV-2036022_17	UniRef90_UPI00143BEF55	125.0	3.43e-34	minor capsid protein	N/A
eggNOG-mapper	UHGV-2036022_17	1449050.JNLE01000003_gene3886	107.0	9.02e-28	N/A	N/A
Pfam	UHGV-2036022_17	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-2036022_17	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-2036022_18	phrog_3366	75.5	1.1e-22	N/A	unknown function
eggNOG-mapper	UHGV-2036022_18	1449050.JNLE01000003_gene3887	79.0	2.49e-17	N/A	N/A
Pfam	UHGV-2036022_18	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-2036022_18	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-2036022_19	phrog_541	91.6	6.9e-27	head-tail adaptor	connector
UniRef90	UHGV-2036022_19	UniRef90_A0A371AQT0	103.0	4.98e-26	N/A	N/A
eggNOG-mapper	UHGV-2036022_19	1304866.K413DRAFT_3039	96.7	3.51e-24	N/A	N/A
PHROG	UHGV-2036022_20	phrog_544	346.6	0	major head protein	head and packaging
UniRef90	UHGV-2036022_20	UniRef90_R6T873	667.0	0	Major head protein	N/A
eggNOG-mapper	UHGV-2036022_20	936580.HMPREF1516_0718	316.0	0	N/A	N/A
NCBIFam	UHGV-2036022_20	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-2036022_20	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2036022_21	phrog_194	102.4	5.3e-30	head scaffolding protein	head and packaging
UniRef90	UHGV-2036022_21	UniRef90_R6U550	376.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-2036022_21	742765.HMPREF9457_02126	154.0	5.60519e-45	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-2036022_21	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-2036022_21	PF06810	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2036022_22	PF12305	N/A	N/A	N/A	N/A
PHROG	UHGV-2036022_23	phrog_581	336.7	0	minor head protein	head and packaging
UniRef90	UHGV-2036022_23	UniRef90_R6SXL7	985.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-2036022_23	658655.HMPREF0988_02563	405.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-2036022_23	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-2036022_23	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2036022_23	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-2036022_24	phrog_533	347.3	0	portal protein	head and packaging
UniRef90	UHGV-2036022_24	UniRef90_R6TDI6	890.0	0	Phage portal protein SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-2036022_24	1304866.K413DRAFT_3035	439.0	0	N/A	N/A
structural_annotation	UHGV-2036022_24	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-2036022_25	K06909	423.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2036022_25	phrog_18557	160.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-2036022_25	UniRef90_A0A1C6IMR2	1098.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-2036022_25	411461.DORFOR_01162	666.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-2036022_25	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-2036022_25	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-2036022_25	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2036022_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2036022_25	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-2036022_26	K09161	143.5	1.3999e-42	N/A	N/A
PHROG	UHGV-2036022_26	phrog_6084	103.9	1.4e-30	N/A	unknown function
UniRef90	UHGV-2036022_26	UniRef90_UPI00189BAEC5	261.0	0	YfbU family protein	N/A
eggNOG-mapper	UHGV-2036022_26	536233.CLO_2529	106.0	8.1e-27	Belongs to the UPF0304 family	N/A
Pfam	UHGV-2036022_26	PF03887	N/A	N/A	YfbU domain	YfbU
NCBIFam	UHGV-2036022_26	NF003936.2	N/A	N/A	YfbU family protein	N/A
COG	UHGV-2036022_26	COG3013	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2036022_26	PF03887,MF_00762,NF003936,COG3013	N/A	N/A	N/A	N/A
UniRef90	UHGV-2036022_27	UniRef90_A0A5R9MHA3	255.0	0	Sigma-70 family RNA polymerase sigma factor	N/A
structural_annotation	UHGV-2036022_27	PF07374	N/A	N/A	N/A	N/A
PHROG	UHGV-2036022_29	phrog_9958	144.7	3.69943e-43	N/A	unknown function
UniRef90	UHGV-2036022_29	UniRef90_A0A356CXW0	283.0	0	N/A	N/A
eggNOG-mapper	UHGV-2036022_29	1160721.RBI_I01591	278.0	0	N/A	N/A
Pfam	UHGV-2036022_29	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-2036022_29	PF19789	N/A	N/A	N/A	N/A
UniRef90	UHGV-2036022_30	UniRef90_A0A373XZK2	746.0	0	N/A	N/A
eggNOG-mapper	UHGV-2036022_30	1160721.RBI_I01194	615.0	0	N/A	N/A
Pfam	UHGV-2036022_30	PF14199	N/A	N/A	N/A	DUF4317
structural_annotation	UHGV-2036022_30	PF14199,MF_00730,NF001557,COG3081	N/A	N/A	N/A	N/A
PHROG	UHGV-2036022_31	phrog_986	84.5	9.7e-25	RNA-binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2036022_31	UniRef90_A0A373V3T6	209.0	0	N/A	N/A
eggNOG-mapper	UHGV-2036022_31	2754.EH55_06950	69.7	0.0000000000000527	N/A	N/A
Pfam	UHGV-2036022_31	PF12961	N/A	N/A	N/A	DUF3850
structural_annotation	UHGV-2036022_31	PF12961,MF_00771,NF003443,COG4043	N/A	N/A	N/A	N/A
PHROG	UHGV-2036022_32	phrog_424	82.6	4.7e-24	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-2036022_32	UniRef90_C0CTA2	471.0	0	Phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-2036022_32	445972.ANACOL_01819	494.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
COG	UHGV-2036022_32	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-2036022_32	PF01507,MF_00064,TIGR00434,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-2036022_35	phrog_824	126.2	1.3e-37	N/A	unknown function
UniRef90	UHGV-2036022_35	UniRef90_A0A373V639	244.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-2036022_35	742738.HMPREF9460_02501	109.0	2.73e-29	VRR_NUC	N/A
Pfam	UHGV-2036022_35	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-2036022_35	PF08774	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2036022_36	742738.HMPREF9460_02499	82.0	7.29e-17	helicase superfamily c-terminal domain	N/A
COG	UHGV-2036022_36	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2036022	Yes	25,463	45	72	1
UHGV-0130524	No	24,692	45	70	1
UHGV-1377095	No	22,251	46	63	1