vOTU vOTU-024786

vOTU: vOTU-024786

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-024786
Number of genomes	3
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00116 → vGENUS-00624 → vOTU-024786
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1378446
Biosample ID	SAMEA2737950
Genome length (bp)	23,264 bps
CheckV completeness	70.19% (Medium-quality)
CDS count	35
CDS density	91.34%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	77	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 70.19)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1378446_1	phrog_13581	173.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1378446_1	768726.HMPREF9178_1076	190.0	0	N/A	N/A
PHROG	UHGV-1378446_2	phrog_2003	168.0	0	N/A	unknown function
UniRef90	UHGV-1378446_2	UniRef90_UPI000AB188AB	139.0	2.04e-40	N/A	N/A
PHROG	UHGV-1378446_3	phrog_9055	107.8	2.2e-32	N/A	unknown function
UniRef90	UHGV-1378446_3	UniRef90_A0A7T2ZXD5	164.0	0	N/A	N/A
eggNOG-mapper	UHGV-1378446_3	365659.smi_0433	131.0	6.01e-39	N/A	N/A
Pfam	UHGV-1378446_3	PF07116	N/A	N/A	N/A	DUF1372
structural_annotation	UHGV-1378446_3	PF07116,COG3585	N/A	N/A	N/A	N/A
PHROG	UHGV-1378446_4	phrog_7626	146.6	3.22299e-44	N/A	unknown function
KOfam	UHGV-1378446_5	K22300	42.6	0.000000000012	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1378446_5	phrog_8	61.0	2.6e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1378446_5	UniRef90_A0A081R3F7	219.0	0	Helix-turn-helix family protein	N/A
eggNOG-mapper	UHGV-1378446_5	1280.SAXN108_1969	48.5	0.00000933	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1378446_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1378446_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1378446_5	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1378446_6	phrog_36	77.9	1.5e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-1378446_6	UniRef90_E6KKC4	253.0	0	Phage transcriptional regulator, RinA family	N/A
eggNOG-mapper	UHGV-1378446_6	1123315.AUIP01000003_gene229	87.8	2.16e-20	Transcriptional regulator, RinA family	N/A
NCBIFam	UHGV-1378446_6	TIGR01636.1	N/A	N/A	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-1378446_6	PF05263,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-1378446_7	K04763	102.7	4.6e-30	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1378446_7	phrog_216	187.2	0	integrase	integration and excision
UniRef90	UHGV-1378446_7	UniRef90_A0A4D6B299	361.0	0	Site-specific recombinase	N/A
eggNOG-mapper	UHGV-1378446_7	644007.C5J955_9CAUD	362.0	0	Phage integrase family	N/A
Pfam	UHGV-1378446_7	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
structural_annotation	UHGV-1378446_7	PF00589,MF_02055,NF040815,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-1378446_8	phrog_119	69.4	5.1e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1378446_8	UniRef90_A0A081R3F3	234.0	0	Prophage LambdaBa02, HNH endonuclease family protein	N/A
eggNOG-mapper	UHGV-1378446_8	644007.C5J957_9CAUD	226.0	0	endonuclease activity	N/A
PHROG	UHGV-1378446_9	phrog_361	153.9	0	terminase small subunit	head and packaging
UniRef90	UHGV-1378446_9	UniRef90_A0A414CIM9	234.0	0	POU-specific domain-containing protein	N/A
eggNOG-mapper	UHGV-1378446_9	1005705.HMPREF9967_1038	240.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-1378446_9	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-1378446_9	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1378446_9	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1378446_10	phrog_9	331.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-1378446_10	UniRef90_A0A7G1JM49	1155.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1378446_10	1316408.HSISM1_1051	1159.0	0	Terminase	N/A
Pfam	UHGV-1378446_10	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1378446_10	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1378446_10	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1378446_10	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1378446_11	phrog_2955	124.3	2.4e-37	N/A	unknown function
UniRef90	UHGV-1378446_11	UniRef90_A0A062WVS8	122.0	6.17e-35	N/A	N/A
PHROG	UHGV-1378446_12	phrog_12	193.0	0	portal protein	head and packaging
UniRef90	UHGV-1378446_12	UniRef90_UPI001CBC02E6	724.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1378446_12	888049.HMPREF8578_0696	786.0	0	Phage portal protein	N/A
Pfam	UHGV-1378446_12	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1378446_12	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1378446_12	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1378446_12	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1378446_13	K06904	133.1	2.6e-39	N/A	N/A
PHROG	UHGV-1378446_13	phrog_80	167.4	0	head maturation protease	head and packaging
UniRef90	UHGV-1378446_13	UniRef90_E6KKD2	377.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-1378446_13	888049.HMPREF8578_0697	377.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-1378446_13	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1378446_13	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1378446_13	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1378446_13	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
UniRef90	UHGV-1378446_14	UniRef90_A0A7X2XMC5	80.1	5.31e-18	Phage major capsid protein (Fragment)	N/A
eggNOG-mapper	UHGV-1378446_14	644007.C5J963_9CAUD	84.3	3.24e-18	peptidase activity	N/A
PHROG	UHGV-1378446_15	phrog_10	146.3	1.59748e-43	major head protein	head and packaging
UniRef90	UHGV-1378446_15	UniRef90_E6KKD3	523.0	0	Phage major capsid protein, HK97 family	N/A
eggNOG-mapper	UHGV-1378446_15	888049.HMPREF8578_0698	523.0	0	capsid protein	N/A
Pfam	UHGV-1378446_15	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1378446_15	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1378446_15	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1378446_15	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1378446_16	phrog_390	93.7	1.3e-27	Arc-like repressor	transcription regulation
UniRef90	UHGV-1378446_16	UniRef90_A0A0P0N6K2	87.8	1.24e-20	Phage transcriptional terminator	N/A
eggNOG-mapper	UHGV-1378446_16	1405498.SSIM_04855	48.1	0.00000649	Rho termination factor, N-terminal domain	N/A
PHROG	UHGV-1378446_17	phrog_2550	143.1	3.09687e-43	N/A	unknown function
UniRef90	UHGV-1378446_17	UniRef90_A0A081R3E6	182.0	0	Prophage pi2 protein 35	N/A
eggNOG-mapper	UHGV-1378446_17	644007.C5J965_9CAUD	182.0	0	Phage gp6-like head-tail connector protein	N/A
structural_annotation	UHGV-1378446_17	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1378446_18	phrog_1951	137.4	2.89999e-41	head-tail adaptor	connector
UniRef90	UHGV-1378446_18	UniRef90_UPI000B58A5F0	180.0	0	phage head closure protein	N/A
eggNOG-mapper	UHGV-1378446_18	644007.C5J966_9CAUD	188.0	0	N/A	N/A
NCBIFam	UHGV-1378446_18	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-1378446_18	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1378446_19	phrog_5	45.8	0.0000000000016	tail completion or Neck1 protein	connector
UniRef90	UHGV-1378446_19	UniRef90_A0A098ANM6	186.0	0	Bacteriophage pi2 protein 37	N/A
eggNOG-mapper	UHGV-1378446_19	644007.C5J967_9CAUD	186.0	0	exonuclease activity	N/A
Pfam	UHGV-1378446_19	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1378446_19	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1378446_20	phrog_78	52.3	0.000000000000011	tail terminator	connector
UniRef90	UHGV-1378446_20	UniRef90_T0U477	154.0	0	Prophage pi2 protein 38	N/A
eggNOG-mapper	UHGV-1378446_20	644007.C5J968_9CAUD	204.0	0	aminopeptidase activity	N/A
structural_annotation	UHGV-1378446_20	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1378446_21	phrog_88	162.3	0	major tail protein	tail
UniRef90	UHGV-1378446_21	UniRef90_E6KKD9	388.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1378446_21	888049.HMPREF8578_0704	388.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1378446_21	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1378446_21	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1378446_22	phrog_709	148.3	1.96182e-44	N/A	unknown function
UniRef90	UHGV-1378446_22	UniRef90_A0A0E4CSV4	185.0	0	Prophage pi2 protein 40	N/A
eggNOG-mapper	UHGV-1378446_22	888049.HMPREF8578_0705	273.0	0	N/A	N/A
structural_annotation	UHGV-1378446_22	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1378446_23	phrog_5755	401.8	0	tail length tape measure protein	tail
UniRef90	UHGV-1378446_23	UniRef90_F9Q552	1298.0	0	Phage tail tape measure protein, TP901 family	N/A
eggNOG-mapper	UHGV-1378446_23	644007.C5J971_9CAUD	1259.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-1378446_23	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1378446_23	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
structural_annotation	UHGV-1378446_23	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1378446_24	phrog_33	55.6	2.1e-16	distal tail protein Dit	tail
UniRef90	UHGV-1378446_24	UniRef90_A0A1F0TGE5	439.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1378446_24	888049.HMPREF8578_0707	463.0	0	N/A	N/A
structural_annotation	UHGV-1378446_24	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1378446_25	phrog_1210	638.7	0	PblB-type receptor binding	other
UniRef90	UHGV-1378446_25	UniRef90_UPI0009F3A55A	1579.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-1378446_25	888049.HMPREF8578_0708	1431.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1378446_25	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-1378446_25	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1378446_25	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1378446_25	PF14594,PF00629,TIGR01665,TIGR04362,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1378446_26	phrog_12683	121.3	2.9e-36	N/A	unknown function
UniRef90	UHGV-1378446_26	UniRef90_A0A081R6K4	108.0	8.07e-30	ATP synthase F0 sector subunit C	N/A
eggNOG-mapper	UHGV-1378446_26	1000588.HMPREF9965_1688	112.0	8.14e-32	N/A	N/A
PHROG	UHGV-1378446_27	phrog_1554	164.6	0	N/A	unknown function
UniRef90	UHGV-1378446_27	UniRef90_UPI001CBEA465	178.0	0	N/A	N/A
eggNOG-mapper	UHGV-1378446_27	768726.HMPREF9178_1050	293.0	0	N/A	N/A
structural_annotation	UHGV-1378446_27	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1378446_28	phrog_21950	141.6	6.69821e-43	N/A	unknown function
UniRef90	UHGV-1378446_28	UniRef90_UPI00085BE04A	103.0	1.26e-26	BhlA/UviB family holin-like peptide	N/A
eggNOG-mapper	UHGV-1378446_28	1214217.ALNF01000014_gene1360	146.0	1.68156e-44	N/A	N/A
Pfam	UHGV-1378446_28	PF10960	N/A	N/A	BhlA holin family	Holin_BhlA
PHROG	UHGV-1378446_29	phrog_608	148.8	1.26117e-44	holin	lysis
UniRef90	UHGV-1378446_29	UniRef90_K8MSC6	194.0	0	LL-H family phage holin	N/A
eggNOG-mapper	UHGV-1378446_29	1000588.HMPREF9965_1685	180.0	0	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1378446_29	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
NCBIFam	UHGV-1378446_29	TIGR01673.1	N/A	N/A	phage holin	N/A
KOfam	UHGV-1378446_30	K01447	60.9	2.3e-17	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1378446_30	phrog_1110	371.5	0	endolysin	lysis
UniRef90	UHGV-1378446_30	UniRef90_UPI00066CC54F	588.0	0	N-acetylmuramoyl-L-alanine amidase family protein	N/A
eggNOG-mapper	UHGV-1378446_30	120574.Q94M29_9CAUD	517.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-1378446_30	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1378446_30	PF01473	N/A	N/A	Putative cell wall binding repeat	Choline_bind_1
structural_annotation	UHGV-1378446_30	PF19127,PF01510,TIGR04035,COG5263	N/A	N/A	N/A	N/A
UniRef90	UHGV-1378446_31	UniRef90_Q38012	102.0	8.04e-27	Orfa protein	N/A
UniRef90	UHGV-1378446_32	UniRef90_UPI0008A3F221	72.8	0.00000000000000104	helix-turn-helix transcriptional regulator	N/A
structural_annotation	UHGV-1378446_32	PF13443,TIGR02607,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1378446_33	phrog_374	66.7	6.1e-38	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1378446_33	UniRef90_A0A1X0WZA6	371.0	0	AP2/ERF domain-containing protein	N/A
eggNOG-mapper	UHGV-1378446_33	936580.HMPREF1516_0698	264.0	0	N/A	N/A
AcrCatalog	UHGV-1378446_33	cluster_10901	136.0	5.01665e-43	NA	N/A
structural_annotation	UHGV-1378446_33	PF18337,PF00847	N/A	N/A	N/A	N/A
PHROG	UHGV-1378446_34	phrog_1529	60.8	3.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-1378446_34	638301.HMPREF0444_1489	55.5	0.00000000139	N/A	N/A
structural_annotation	UHGV-1378446_34	PF01381,TIGR02607,COG3655	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-1378446_35	cluster_156468	29.3	0.000171	NA	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1378446	Yes	23,264	40	70	1
UHGV-1772466	No	15,200	41	46	1
UHGV-1764519	No	13,793	40	42	1