vOTU vOTU-024962

vOTU: vOTU-024962

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-024962
Number of genomes	3
Taxonomy (ICTV)	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00087 → vGENUS-00661 → vOTU-024962
Host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1509576
Biosample ID	SAMN02334130
Genome length (bp)	30,465 bps
CheckV completeness	82.95% (Medium-quality)
CDS count	42
CDS density	94.41%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium	Total connections	183	Host agreement	97.81
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium	Total connections	29	Host agreement	93.1

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 82.95)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1509576_1	K01356	118.2	1.1e-34	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1509576_1	phrog_4	128.5	6.4e-38	transcriptional repressor	transcription regulation
UniRef90	UHGV-1509576_1	UniRef90_E2NR67	418.0	0	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1509576_1	552396.HMPREF0863_02447	150.0	8.82818e-43	Represses a number of genes involved in the response to DNA damage (SOS response)	N/A
Pfam	UHGV-1509576_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1509576_1	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1509576_1	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1509576_1	PF01381,PF00717,MF_00015,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1509576_2	K07729	55.5	0.0000000000000014	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1509576_2	phrog_8	47.7	0.00000000000039	transcriptional regulator	transcription regulation
UniRef90	UHGV-1509576_2	UniRef90_E2NR68	134.0	1.29e-39	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1509576_2	642492.Clole_1473	54.3	0.0000000885	sequence-specific DNA binding	N/A
Pfam	UHGV-1509576_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1509576_2	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-1509576_4	K07741	127.4	2.6e-37	antB; anti-repressor protein	N/A
PHROG	UHGV-1509576_4	phrog_130	264.9	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1509576_4	UniRef90_UPI001C38B6C0	419.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-1509576_4	1232452.BAIB02000007_gene1603	297.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1509576_4	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1509576_4	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1509576_4	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1509576_4	PF03374,PF02498,TIGR02681,COG3617,COG3645	N/A	N/A	N/A	N/A
UniRef90	UHGV-1509576_5	UniRef90_A0A416DT94	90.9	3.51e-22	DNA-binding protein	N/A
structural_annotation	UHGV-1509576_5	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-1509576_7	K03546	58.7	7.4e-17	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-1509576_7	phrog_1499	472.9	0	N/A	unknown function
UniRef90	UHGV-1509576_7	UniRef90_E2NR75	799.0	0	RecF/RecN/SMC N-terminal domain protein	N/A
eggNOG-mapper	UHGV-1509576_7	1214217.ALNF01000014_gene1402	486.0	0	AAA domain	N/A
Pfam	UHGV-1509576_7	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-1509576_7	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1509576_7	PF11398,MF_00365,TIGR00634,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-1509576_8	phrog_124	221.9	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1509576_8	UniRef90_UPI001EDD2096	350.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1509576_8	552396.HMPREF0863_02438	345.0	0	AAA domain	N/A
Pfam	UHGV-1509576_8	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1509576_8	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-1509576_9	phrog_2698	194.9	0	N/A	unknown function
UniRef90	UHGV-1509576_9	UniRef90_UPI001F15B425	126.0	5.43e-34	N/A	N/A
eggNOG-mapper	UHGV-1509576_9	650150.ERH_0593	123.0	1.17e-33	N/A	N/A
Pfam	UHGV-1509576_9	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-1509576_9	PF05037	N/A	N/A	N/A	N/A
KOfam	UHGV-1509576_10	K17677	345.6	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-1509576_10	phrog_16	288.7	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1509576_10	UniRef90_E2NR78	1003.0	0	Helicase C-terminal domain protein	N/A
eggNOG-mapper	UHGV-1509576_10	1232449.BAHV02000008_gene620	749.0	0	helicase superfamily c-terminal domain	N/A
PADLOC	UHGV-1509576_10	mREase_IV_00005	121.4	6.3e-36	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-1509576_10	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-1509576_10	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1509576_10	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-1509576_10	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
KOfam	UHGV-1509576_11	K07505	348.0	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-1509576_11	phrog_2597	1084.8	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1509576_11	UniRef90_E2NR79	1476.0	0	Primase C terminal 2 (PriCT-2)	N/A
eggNOG-mapper	UHGV-1509576_11	610130.Closa_1370	786.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-1509576_11	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-1509576_11	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-1509576_11	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-1509576_11	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-1509576_12	K01160	44.3	0.0000000000046	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1509576_12	phrog_140	83.7	2.7e-24	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1509576_12	UniRef90_E2NR80	256.0	0	Crossover junction endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-1509576_12	1232449.BAHV02000018_gene1542	132.0	3.37e-38	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1509576_12	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1509576_12	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1509576_12	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1509576_14	PF10656	N/A	N/A	N/A	N/A
PHROG	UHGV-1509576_15	phrog_4856	86.3	3.2e-25	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-1509576_15	UniRef90_E2NR83	208.0	0	MazG domain-containing protein	N/A
Pfam	UHGV-1509576_15	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
structural_annotation	UHGV-1509576_15	MF_01019,NF002747,COG0140	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1509576_18	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
PHROG	UHGV-1509576_20	phrog_22292	101.4	7.1e-30	N/A	unknown function
eggNOG-mapper	UHGV-1509576_20	1232446.BAIE02000002_gene811	65.1	0.0000000000395	N/A	N/A
PHROG	UHGV-1509576_23	phrog_36	63.1	5.7e-18	transcriptional regulator	transcription regulation
Pfam	UHGV-1509576_23	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-1509576_23	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1509576_23	PF08281,MF_00674,NF007227,COG1191	N/A	N/A	N/A	N/A
KOfam	UHGV-1509576_24	K07474	89.0	1.1e-25	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1509576_24	phrog_51	110.7	1.5e-32	terminase small subunit	head and packaging
UniRef90	UHGV-1509576_24	UniRef90_E2NR91	270.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1509576_24	1504823.CCMM01000008_gene1049	226.0	0	DNA packaging	N/A
Pfam	UHGV-1509576_24	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1509576_24	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1509576_24	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1509576_25	K06909	364.9	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1509576_25	phrog_3717	168.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-1509576_25	UniRef90_A0A6N9L4W9	810.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1509576_25	1504823.CCMM01000008_gene1048	749.0	0	DNA packaging	N/A
Pfam	UHGV-1509576_25	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1509576_25	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1509576_25	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1509576_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1509576_25	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1509576_26	phrog_64	388.8	0	portal protein	head and packaging
UniRef90	UHGV-1509576_26	UniRef90_A0A6N9L3D6	895.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1509576_26	445974.CLORAM_02935	476.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1509576_26	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1509576_26	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1509576_26	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1509576_27	phrog_115	327.3	0	minor head protein	head and packaging
UniRef90	UHGV-1509576_27	UniRef90_UPI001C387790	748.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1509576_27	1504823.CCMM01000008_gene1046	570.0	0	cell adhesion	N/A
Pfam	UHGV-1509576_27	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
Pfam	UHGV-1509576_27	PF14424	N/A	N/A	The BURPS668_1122 family of deaminases	Toxin-deaminase
NCBIFam	UHGV-1509576_27	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1509576_27	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1509576_27	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1509576_29	phrog_3675	114.9	3e-34	N/A	unknown function
UniRef90	UHGV-1509576_29	UniRef90_A0A0E4H649	120.0	4.4e-33	YjcQ protein	N/A
eggNOG-mapper	UHGV-1509576_29	1120978.KB894082_gene1061	140.0	6.18954e-42	YjcQ protein	N/A
Pfam	UHGV-1509576_29	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-1509576_29	PF09639,TIGR04176,COG1695	N/A	N/A	N/A	N/A
PHROG	UHGV-1509576_30	phrog_172	158.2	0	head scaffolding protein	head and packaging
UniRef90	UHGV-1509576_30	UniRef90_A0A6N9L4V5	270.0	0	N/A	N/A
eggNOG-mapper	UHGV-1509576_30	445974.CLORAM_02931	126.0	7.79e-34	N/A	N/A
Pfam	UHGV-1509576_30	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1509576_30	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1509576_31	phrog_422	298.8	0	major head protein	head and packaging
UniRef90	UHGV-1509576_31	UniRef90_A0A2H4JCM6	302.0	0	Putative capsid protein	N/A
eggNOG-mapper	UHGV-1509576_31	1211844.CBLM010000016_gene1491	307.0	0	N/A	N/A
structural_annotation	UHGV-1509576_31	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1509576_32	phrog_2724	63.6	3.5e-18	N/A	unknown function
UniRef90	UHGV-1509576_32	UniRef90_A0A6N9L4P9	157.0	0	Rho_N domain-containing protein	N/A
Pfam	UHGV-1509576_32	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
COG	UHGV-1509576_32	COG0261	N/A	N/A	Ribosomal protein L21	N/A
structural_annotation	UHGV-1509576_32	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-1509576_33	phrog_132	42.2	0.000000000013	head-tail adaptor	connector
UniRef90	UHGV-1509576_33	UniRef90_UPI001C101B39	52.4	0.00000147	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1509576_33	1235800.C819_00483	54.3	0.0000000635	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1509576_33	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1509576_33	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1509576_34	phrog_2168	91.1	8.7e-27	N/A	unknown function
eggNOG-mapper	UHGV-1509576_34	1280689.AUJC01000003_gene969	78.6	1.78e-17	N/A	N/A
structural_annotation	UHGV-1509576_34	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1509576_35	phrog_5	68.3	1.5e-19	tail completion or Neck1 protein	connector
UniRef90	UHGV-1509576_35	UniRef90_A0A6N9L3B6	323.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1509576_35	742733.HMPREF9469_01819	150.0	4.76441e-44	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1509576_35	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1509576_35	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1509576_35	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1509576_36	phrog_78	55.9	8.1e-16	tail terminator	connector
eggNOG-mapper	UHGV-1509576_36	1504823.CCMM01000008_gene1036	138.0	7.12e-41	N/A	N/A
structural_annotation	UHGV-1509576_36	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1509576_37	phrog_158	73.9	3.1e-21	major tail protein	tail
UniRef90	UHGV-1509576_37	UniRef90_A0A6N9L2K6	261.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1509576_37	445974.CLORAM_02924	176.0	0	Phage tail tube protein, TTP	N/A
Pfam	UHGV-1509576_37	PF16461	N/A	N/A	Lambda phage tail tube protein, TTP	Phage_TTP_12
structural_annotation	UHGV-1509576_37	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1509576_38	phrog_183	59.0	9e-17	tail chaperone protein	tail
UniRef90	UHGV-1509576_38	UniRef90_UPI0011C9B36A	219.0	0	N/A	N/A
eggNOG-mapper	UHGV-1509576_38	445974.CLORAM_02923	116.0	9.38e-32	N/A	N/A
Pfam	UHGV-1509576_38	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-1509576_38	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-1509576_39	phrog_1535	317.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1509576_39	UniRef90_A0A6N9L4U2	1404.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-1509576_39	650150.ERH_0621	345.0	0	tape measure	N/A
Pfam	UHGV-1509576_39	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1509576_39	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1509576_39	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1509576_39	PF20155,TIGR01760,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-1509576_40	phrog_1194	84.3	1.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-1509576_40	1504823.CCMM01000008_gene1031	189.0	0	N/A	N/A
Pfam	UHGV-1509576_40	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1509576_40	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1509576_41	phrog_15074	59.0	2e-17	N/A	unknown function
eggNOG-mapper	UHGV-1509576_41	445974.CLORAM_02919	490.0	0	cellulase activity	N/A
COG	UHGV-1509576_41	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-1509576_41	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1509576_42	phrog_30133	114.1	1.2e-33	virion structural protein	head and packaging
UniRef90	UHGV-1509576_42	UniRef90_I7ARM6	283.0	0	N/A	N/A
eggNOG-mapper	UHGV-1509576_42	1504823.CCMM01000008_gene1029	297.0	0	N/A	N/A
structural_annotation	UHGV-1509576_42	PF14874,NF038186	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1509576	Yes	30,465	38	83	1
UHGV-1519694	No	26,833	38	73	1
UHGV-1403067	No	25,273	38	69	1