vOTU vOTU-025032

vOTU: vOTU-025032

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-025032
Number of genomes	3
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00017 → vSUBFAM-00816 → vGENUS-01460 → vOTU-025032
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1410535
Biosample ID	SAMEA2738091
Genome length (bp)	37,349 bps
CheckV completeness	65.27% (Medium-quality)
CDS count	35
CDS density	98.69%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	2	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 65.27)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1410535_3	phrog_7502	40.2	0.000000000028	N/A	unknown function
PHROG	UHGV-1410535_5	phrog_998	201.6	0	endolysin	lysis
UniRef90	UHGV-1410535_5	UniRef90_A0A4D6AB26	294.0	0	Lysin	N/A
eggNOG-mapper	UHGV-1410535_5	873448.STRPO_0302	282.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-1410535_5	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
COG	UHGV-1410535_5	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1410535_5	PF05382,PF18341,NF033742,COG0791,COG4991	N/A	N/A	N/A	N/A
KOfam	UHGV-1410535_7	K19721	48.8	0.000000000000021	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	N/A
PHROG	UHGV-1410535_7	phrog_21909	196.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1410535_7	999425.HMPREF9186_02055	183.0	0	N/A	N/A
Pfam	UHGV-1410535_7	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-1410535_8	phrog_1554	137.3	4.19997e-41	N/A	unknown function
UniRef90	UHGV-1410535_8	UniRef90_A0A7X2X378	123.0	1.25e-31	N/A	N/A
eggNOG-mapper	UHGV-1410535_8	1035189.HMPREF9954_1920	107.0	4.13e-26	N/A	N/A
structural_annotation	UHGV-1410535_8	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1410535_10	phrog_1330	420.7	0	tail protein	tail
UniRef90	UHGV-1410535_10	UniRef90_UPI001AE9E8C0	175.0	1.92999e-40	phage tail protein	N/A
eggNOG-mapper	UHGV-1410535_10	1329250.WOSG25_220020	218.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1410535_10	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1410535_10	PF07902	N/A	N/A	gp58-like protein	Gp58
NCBIFam	UHGV-1410535_10	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1410535_10	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1410535_10	PF14594,PF00629,PF10528,TIGR01665,NF033675,NF038393,COG4926	N/A	N/A	N/A	N/A
UniRef90	UHGV-1410535_11	UniRef90_A0A1M5Z1G4	82.4	0.00000000000000371	Putative phage tail component, N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1410535_11	1201292.DR75_1502	75.1	0.000000000000342	phage tail	N/A
COG	UHGV-1410535_11	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1410535_11	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1410535_12	phrog_4372	417.9	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1410535_12	742733.HMPREF9469_05020	272.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-1410535_12	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1410535_12	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1410535_12	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1410535_13	phrog_5	43.8	0.0000000000069	tail completion or Neck1 protein	connector
UniRef90	UHGV-1410535_13	UniRef90_A0A374AC21	107.0	1.57e-27	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1410535_13	478749.BRYFOR_08514	97.8	1.14e-24	N/A	N/A
structural_annotation	UHGV-1410535_13	PF17395,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1410535_14	phrog_7502	69.7	7.4e-24	N/A	unknown function
PHROG	UHGV-1410535_15	phrog_4338	127.1	8.7e-38	N/A	unknown function
eggNOG-mapper	UHGV-1410535_15	475178.B2BTI0_9CAUD	71.2	0.000000000000641	N/A	N/A
PHROG	UHGV-1410535_16	phrog_4282	123.5	1.5e-36	N/A	unknown function
eggNOG-mapper	UHGV-1410535_16	742733.HMPREF9469_05024	73.6	0.00000000000000716	N/A	N/A
PHROG	UHGV-1410535_17	phrog_2645	303.9	0	major tail protein	tail
UniRef90	UHGV-1410535_17	UniRef90_A0A7T0M2B2	227.0	0	Minor tail protein	N/A
eggNOG-mapper	UHGV-1410535_17	742740.HMPREF9474_02267	227.0	0	N/A	N/A
structural_annotation	UHGV-1410535_17	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1410535_18	478749.BRYFOR_08519	70.9	0.0000000000000173	N/A	N/A
structural_annotation	UHGV-1410535_18	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1410535_19	phrog_4270	85.7	3.7e-25	N/A	unknown function
UniRef90	UHGV-1410535_19	UniRef90_D4P7D7	68.6	0.00000000000181	Gp026	N/A
eggNOG-mapper	UHGV-1410535_19	478749.BRYFOR_08520	79.0	2.28e-17	N/A	N/A
structural_annotation	UHGV-1410535_19	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
KOfam	UHGV-1410535_20	K06904	77.0	2e-22	N/A	N/A
PHROG	UHGV-1410535_20	phrog_3270	547.4	0	head maturation protease	head and packaging
UniRef90	UHGV-1410535_20	UniRef90_A0A6G5Y7H0	410.0	0	BIG2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1410535_20	1476888.X4YUP1_9CAUD	365.0	0	peptidase activity	N/A
Pfam	UHGV-1410535_20	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
structural_annotation	UHGV-1410535_20	PF04586,PF06673,TIGR01543,TIGR01554,COG3740,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1410535_21	phrog_12	114.8	2.9e-34	portal protein	head and packaging
UniRef90	UHGV-1410535_21	UniRef90_UPI001D05DA00	340.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1410535_21	742740.HMPREF9474_02271	333.0	0	Phage portal protein	N/A
Pfam	UHGV-1410535_21	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-1410535_21	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1410535_22	phrog_9	257.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1410535_22	UniRef90_A0A5C7M263	759.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1410535_22	691965.D4P7C5_9CAUD	748.0	0	Phage Terminase	N/A
Pfam	UHGV-1410535_22	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1410535_22	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
structural_annotation	UHGV-1410535_22	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1410535_23	phrog_7021	57.7	2.1e-16	N/A	unknown function
PHROG	UHGV-1410535_24	phrog_4247	65.8	5.1e-19	virion structural protein	head and packaging
eggNOG-mapper	UHGV-1410535_24	428125.CLOLEP_01407	50.8	0.00000156	N/A	N/A
PHROG	UHGV-1410535_25	phrog_4321	144.1	3.50325e-43	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410535_25	UniRef90_X4YEE5	128.0	1.25e-35	Homing endonuclease	N/A
eggNOG-mapper	UHGV-1410535_25	742733.HMPREF9469_05036	99.4	1.11e-24	N/A	N/A
PHROG	UHGV-1410535_26	phrog_4259	56.0	6.3e-16	N/A	unknown function
eggNOG-mapper	UHGV-1410535_26	742733.HMPREF9469_05037	60.5	0.000000000206	N/A	N/A
PHROG	UHGV-1410535_27	phrog_6918	48.2	0.00000000000016	holin	lysis
Pfam	UHGV-1410535_27	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1410535_27	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-1410535_29	phrog_4303	69.1	4.2e-20	N/A	unknown function
PHROG	UHGV-1410535_30	phrog_4291	1003.6	0	RNA-dependent RNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410535_30	UniRef90_A0A1C5MZZ8	674.0	0	Transposase and inactivated derivatives, IS30 family	N/A
eggNOG-mapper	UHGV-1410535_30	742740.HMPREF9474_02278	627.0	0	N/A	N/A
Pfam	UHGV-1410535_30	PF09339	N/A	N/A	IclR helix-turn-helix domain	HTH_IclR
Pfam	UHGV-1410535_30	PF13412	N/A	N/A	Winged helix-turn-helix DNA-binding	HTH_24
Pfam	UHGV-1410535_30	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-1410535_30	PF05183	N/A	N/A	N/A	N/A
PHROG	UHGV-1410535_31	phrog_3953	159.9	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410535_31	UniRef90_A0A514CXS9	176.0	0	Cas4 family exonuclease	N/A
eggNOG-mapper	UHGV-1410535_31	1476888.X4YEL4_9CAUD	157.0	0	N/A	N/A
structural_annotation	UHGV-1410535_31	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
UniRef90	UHGV-1410535_32	UniRef90_A0A5J6D7X3	83.6	8.28e-19	Hydrolase	N/A
eggNOG-mapper	UHGV-1410535_32	742740.HMPREF9474_02280	90.5	2.58e-22	N/A	N/A
structural_annotation	UHGV-1410535_32	PF01870,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-1410535_33	phrog_62	127.9	1.5e-38	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410535_33	UniRef90_A0A374JNH7	391.0	0	Helicase ATP-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-1410535_33	665950.HMPREF1025_01961	387.0	0	Helicase conserved C-terminal domain	N/A
COG	UHGV-1410535_33	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-1410535_33	PF02399,MF_01821,NF038318,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-1410535_34	phrog_4787	82.7	1.8e-24	single strand annealing protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1410535_34	742740.HMPREF9474_02302	52.8	0.00000311	N/A	N/A
structural_annotation	UHGV-1410535_34	PF21265,MF_04153	N/A	N/A	N/A	N/A
PHROG	UHGV-1410535_35	phrog_4210	434.6	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410535_35	UniRef90_A0A6G6Y006	210.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-1410535_35	475178.B2BTL9_9CAUD	331.0	0	nucleic acid binding	N/A
structural_annotation	UHGV-1410535_35	PF00136,MF_04100,NF004418,COG0417	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1410535	Yes	37,349	40	65	1
UHGV-1748484	No	22,603	40	40	1
UHGV-1677455	No	20,894	40	37	1