vOTU vOTU-025033

vOTU: vOTU-025033

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-025033
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00096 → vOTU-025033
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1410695
Biosample ID	SAMEA2738152
Genome length (bp)	25,236 bps
CheckV completeness	62.21% (Medium-quality)
CDS count	39
CDS density	93.82%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	37	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 62.21)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1410695_1	phrog_9680	807.3	0	host range and adsorption protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1410695_1	UniRef90_X8KFI9	1429.0	0	Endosialidase chaperone	N/A
eggNOG-mapper	UHGV-1410695_1	936580.HMPREF1516_0707	1429.0	0	N/A	N/A
structural_annotation	UHGV-1410695_1	PF05113,PF04862,NF033848,NF033675,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_2	phrog_1194	158.8	0	N/A	unknown function
UniRef90	UHGV-1410695_2	UniRef90_G0IA27	222.0	0	N/A	N/A
eggNOG-mapper	UHGV-1410695_2	997830.HMPREF1124_0608	233.0	0	N/A	N/A
Pfam	UHGV-1410695_2	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1410695_2	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_3	phrog_31167	750.9	0	N/A	unknown function
UniRef90	UHGV-1410695_3	UniRef90_A0A139QKW3	1033.0	0	Phage tail length tape-measure protein	N/A
eggNOG-mapper	UHGV-1410695_3	936580.HMPREF1516_0709	1054.0	0	phage tail tape measure protein	N/A
COG	UHGV-1410695_3	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1410695_3	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_4	phrog_15193	359.0	0	N/A	unknown function
UniRef90	UHGV-1410695_4	UniRef90_A0A139QLB9	314.0	0	Phage tail length tape-measure protein	N/A
eggNOG-mapper	UHGV-1410695_4	1000588.HMPREF9965_1691	300.0	0	phage tail tape measure protein	N/A
COG	UHGV-1410695_4	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1410695_5	phrog_2066	124.3	4.7e-37	N/A	unknown function
eggNOG-mapper	UHGV-1410695_5	1123304.AQYA01000037_gene232	117.0	1.12e-32	N/A	N/A
PHROG	UHGV-1410695_6	phrog_183	57.7	2.4e-16	tail chaperone protein	tail
UniRef90	UHGV-1410695_6	UniRef90_UPI0005E2C73B	164.0	0	N/A	N/A
eggNOG-mapper	UHGV-1410695_6	1123304.AQYA01000037_gene231	129.0	6.44e-37	N/A	N/A
Pfam	UHGV-1410695_6	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-1410695_6	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_7	phrog_158	88.1	1.4e-25	major tail protein	tail
UniRef90	UHGV-1410695_7	UniRef90_A0A139QKY4	274.0	0	Putative major tail protein	N/A
eggNOG-mapper	UHGV-1410695_7	1000588.HMPREF9965_1694	243.0	0	Phage tail tube protein, TTP	N/A
Pfam	UHGV-1410695_7	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-1410695_7	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_8	phrog_78	80.8	1.6e-23	tail terminator	connector
eggNOG-mapper	UHGV-1410695_8	1000588.HMPREF9965_1695	248.0	0	N/A	N/A
structural_annotation	UHGV-1410695_8	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_9	phrog_5	100.9	1.4e-29	tail completion or Neck1 protein	connector
UniRef90	UHGV-1410695_9	UniRef90_F9PCF7	311.0	0	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-1410695_9	936580.HMPREF1516_0714	320.0	0	N/A	N/A
Pfam	UHGV-1410695_9	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1410695_9	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1410695_9	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_10	phrog_2168	140.5	3.99931e-42	N/A	unknown function
eggNOG-mapper	UHGV-1410695_10	1054460.SPPN_00190	164.0	0	N/A	N/A
structural_annotation	UHGV-1410695_10	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_11	phrog_132	70.6	1.7e-20	head-tail adaptor	connector
UniRef90	UHGV-1410695_11	UniRef90_X8KD93	180.0	0	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-1410695_11	936580.HMPREF1516_0716	180.0	0	N/A	N/A
Pfam	UHGV-1410695_11	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1410695_11	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_12	phrog_933	69.6	3.3e-20	N/A	unknown function
PHROG	UHGV-1410695_13	phrog_544	301.0	0	major head protein	head and packaging
UniRef90	UHGV-1410695_13	UniRef90_X8KCG7	534.0	0	Major capsid protein, N4-gp56 family	N/A
eggNOG-mapper	UHGV-1410695_13	936580.HMPREF1516_0718	534.0	0	N/A	N/A
NCBIFam	UHGV-1410695_13	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1410695_13	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_14	phrog_172	167.0	0	head scaffolding protein	head and packaging
UniRef90	UHGV-1410695_14	UniRef90_A0A2J9ESP3	306.0	0	N/A	N/A
eggNOG-mapper	UHGV-1410695_14	936580.HMPREF1516_0719	305.0	0	N/A	N/A
Pfam	UHGV-1410695_14	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1410695_14	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_15	phrog_1233	73.6	3.1e-21	N/A	unknown function
UniRef90	UHGV-1410695_15	UniRef90_A0A116RB38	144.0	6.24979e-43	N/A	N/A
eggNOG-mapper	UHGV-1410695_15	764299.STRIC_2132	155.0	0	N/A	N/A
structural_annotation	UHGV-1410695_15	PF06114	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_16	phrog_5469	70.1	3e-20	N/A	unknown function
PHROG	UHGV-1410695_17	phrog_3755	81.0	6.9e-24	N/A	unknown function
PHROG	UHGV-1410695_18	phrog_2841	508.9	0	minor head protein	head and packaging
UniRef90	UHGV-1410695_18	UniRef90_UPI000AFFC0B3	643.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1410695_18	1000588.HMPREF9965_1704	642.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-1410695_18	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1410695_18	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1410695_18	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1410695_18	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_19	phrog_64	431.1	0	portal protein	head and packaging
UniRef90	UHGV-1410695_19	UniRef90_F9LWC5	874.0	0	Phage portal protein, SPP1 family	N/A
eggNOG-mapper	UHGV-1410695_19	1000588.HMPREF9965_1705	874.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1410695_19	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1410695_19	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1410695_19	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-1410695_20	K06909	371.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1410695_20	phrog_3717	278.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1410695_20	UniRef90_A0A141DZZ4	848.0	0	Terminase, large subunit	N/A
eggNOG-mapper	UHGV-1410695_20	936580.HMPREF1516_0725	890.0	0	Phage terminase, large subunit	N/A
Pfam	UHGV-1410695_20	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1410695_20	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1410695_20	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1410695_20	COG1783	N/A	N/A	Phage terminase large subunit	N/A
HAMAP	UHGV-1410695_20	MF_04145	N/A	N/A	Terminase, large subunit	N/A
structural_annotation	UHGV-1410695_20	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-1410695_21	UniRef90_A0A6G2DX06	116.0	8.03e-33	Terminase small subunit (Fragment)	N/A
eggNOG-mapper	UHGV-1410695_21	1461246.X2KUE5_9VIRU	113.0	1.89e-31	Terminase small subunit	N/A
PHROG	UHGV-1410695_22	phrog_36	85.5	7.2e-25	transcriptional regulator	transcription regulation
UniRef90	UHGV-1410695_22	UniRef90_A0A1E1G8A3	249.0	0	RNA polymerase sigma factor SigD	N/A
eggNOG-mapper	UHGV-1410695_22	936580.HMPREF1516_0728	112.0	4.94e-30	sigma factor activity	N/A
Pfam	UHGV-1410695_22	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-1410695_22	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1410695_22	PF07374,MF_00674,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_23	phrog_8	41.8	0.000000000021	transcriptional regulator	transcription regulation
UniRef90	UHGV-1410695_23	UniRef90_A0A1E1G8B5	140.0	4.15065e-42	Helix-turn-helix protein	N/A
Pfam	UHGV-1410695_23	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1410695_23	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1410695_23	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_24	phrog_3476	129.7	1.1e-38	N/A	unknown function
PHROG	UHGV-1410695_25	phrog_98	97.0	1.5e-28	N/A	unknown function
UniRef90	UHGV-1410695_25	UniRef90_S7YZE9	165.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1410695_25	945021.TEH_08480	79.7	3.05e-17	YopX protein	N/A
Pfam	UHGV-1410695_25	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1410695_25	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1410695_25	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_26	phrog_1992	147.5	5.32493e-44	MazG-like pyrophosphatase	other
UniRef90	UHGV-1410695_26	UniRef90_A0A139P1L7	283.0	0	Phage DNA-binding protein	N/A
eggNOG-mapper	UHGV-1410695_26	888049.HMPREF8578_0682	290.0	0	Mazg nucleotide pyrophosphohydrolase	N/A
COG	UHGV-1410695_26	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1410695_26	PF08761,MF_01020,NF007113,COG4508	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_27	phrog_11897	161.0	0	N/A	unknown function
UniRef90	UHGV-1410695_27	UniRef90_A0A4V0E3L2	146.0	7.70714e-44	N/A	N/A
KOfam	UHGV-1410695_28	K00558	304.8	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1410695_28	phrog_116	325.3	0	DNA methyltransferase	other
UniRef90	UHGV-1410695_28	UniRef90_A0A6I3UWI0	660.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-1410695_28	1566990.A0A0A0YQS0_9CAUD	649.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1410695_28	MTase_II_00058	339.1	0	Type II methyltransferase	RM
Pfam	UHGV-1410695_28	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1410695_28	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
structural_annotation	UHGV-1410695_28	PF00145,MF_01857,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_29	phrog_884	113.6	7.4e-34	N/A	unknown function
UniRef90	UHGV-1410695_29	UniRef90_A0A0T8EK85	153.0	0	Gp27	N/A
eggNOG-mapper	UHGV-1410695_29	585203.SMSK564_1298	151.0	0	N/A	N/A
Pfam	UHGV-1410695_29	PF07116	N/A	N/A	N/A	DUF1372
structural_annotation	UHGV-1410695_29	PF07116,COG3585	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_31	phrog_4252	99.4	1.2e-29	N/A	unknown function
UniRef90	UHGV-1410695_31	UniRef90_A0A060QNF3	57.0	0.00000000077	N/A	N/A
PHROG	UHGV-1410695_33	phrog_121	137.5	6.79994e-41	N/A	unknown function
UniRef90	UHGV-1410695_33	UniRef90_A0A2A2TVM5	196.0	0	N/A	N/A
eggNOG-mapper	UHGV-1410695_33	768726.HMPREF9178_1077	181.0	0	N/A	N/A
Pfam	UHGV-1410695_33	PF07852	N/A	N/A	N/A	DUF1642
structural_annotation	UHGV-1410695_33	PF07852	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_34	phrog_1638	79.6	2.5e-23	N/A	unknown function
eggNOG-mapper	UHGV-1410695_34	585203.SMSK564_1300	50.1	0.000000169	N/A	N/A
structural_annotation	UHGV-1410695_34	PF16454	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_35	phrog_8736	54.3	0.0000000000000017	N/A	unknown function
structural_annotation	UHGV-1410695_35	NF041259	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_36	phrog_1313	490.0	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410695_36	UniRef90_A0A1X0X068	767.0	0	Helicase	N/A
eggNOG-mapper	UHGV-1410695_36	537874.B3GVY8_9CAUD	766.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-1410695_36	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
structural_annotation	UHGV-1410695_36	PF05272,MF_04000,NF011296,COG5545	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_37	phrog_695	237.6	0	DNA polymerase/primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410695_37	UniRef90_UPI001159EAE9	533.0	0	bifunctional DNA primase/polymerase	N/A
eggNOG-mapper	UHGV-1410695_37	1321372.AQQB01000060_gene51	470.0	0	N/A	N/A
Pfam	UHGV-1410695_37	PF09250	N/A	N/A	Bifunctional DNA primase/polymerase, N-terminal	Prim-Pol
Pfam	UHGV-1410695_37	PF08708	N/A	N/A	Primase C terminal 1 (PriCT-1)	PriCT_1
COG	UHGV-1410695_37	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1410695_37	PF09250,PF08708,NF040561,COG4983	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_38	phrog_378	87.3	2.1e-25	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410695_38	UniRef90_A0A7X2X3A2	246.0	0	N/A	N/A
eggNOG-mapper	UHGV-1410695_38	537874.B3GVY6_9CAUD	269.0	0	N/A	N/A
structural_annotation	UHGV-1410695_38	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-1410695_39	phrog_124	131.0	8.9e-39	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410695_39	UniRef90_A0A1X0WZ30	456.0	0	NTP-binding protein	N/A
eggNOG-mapper	UHGV-1410695_39	537874.B3GVY5_9CAUD	397.0	0	AAA domain	N/A
Pfam	UHGV-1410695_39	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1410695_39	PF13479,MF_00348,TIGR01618,COG0468	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1410695	Yes	25,236	40	62	1
UHGV-1587238	No	17,963	38	44	1
UHGV-1626875	No	12,417	42	31	1