vOTU vOTU-025120

vOTU: vOTU-025120

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-025120
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00007 → vGENUS-00139 → vOTU-025120
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1420313
Biosample ID	N/A
Genome length (bp)	34,033 bps
CheckV completeness	59.02% (Medium-quality)
CDS count	52
CDS density	89.16%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	507	Host agreement	98.42
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 59.02)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1420313_1	phrog_130	88.9	7.4e-26	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1420313_1	UniRef90_UPI00165D45DE	88.2	6.54e-21	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-1420313_1	1178537.BA1_08626	85.5	2.2e-19	BRO family, N-terminal domain	N/A
Pfam	UHGV-1420313_1	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-1420313_1	COG3617	N/A	N/A	Prophage antirepressor	N/A
UniRef90	UHGV-1420313_2	UniRef90_A0A7X1LWA7	80.5	2.17e-18	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1420313_2	428125.CLOLEP_02737	59.7	0.0000000000581	N/A	N/A
structural_annotation	UHGV-1420313_2	TIGR03070	N/A	N/A	N/A	N/A
PHROG	UHGV-1420313_3	phrog_8	56.1	8.4e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1420313_3	UniRef90_A0A373XY93	95.1	5.86e-23	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1420313_3	665956.HMPREF1032_02614	65.9	0.00000000000217	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1420313_3	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1420313_3	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1420313_8	UniRef90_A0A2A7AM70	194.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1420313_8	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1420313_8	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1420313_9	phrog_4402	106.3	2.6e-31	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1420313_9	UniRef90_A0A0H5Q331	266.0	0	Rep_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1420313_9	999413.HMPREF1094_04438	147.0	3.62e-38	Initiator Replication protein	N/A
Pfam	UHGV-1420313_9	PF01051	N/A	N/A	Initiator Replication protein, WH1	Rep3_N
Pfam	UHGV-1420313_9	PF21205	N/A	N/A	Initiator Rep protein, WH2	Rep3_C
COG	UHGV-1420313_9	COG5527	N/A	N/A	Protein involved in initiation of plasmid replication	N/A
structural_annotation	UHGV-1420313_9	PF01051,PF21205,NF010305,COG5527	N/A	N/A	N/A	N/A
KOfam	UHGV-1420313_11	K03496	229.2	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-1420313_11	phrog_164	159.1	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1420313_11	UniRef90_A0A1C6BS15	211.0	0	Sporulation initiation inhibitor protein soj	N/A
eggNOG-mapper	UHGV-1420313_11	1408423.JHYA01000021_gene392	195.0	0	Cellulose biosynthesis protein BcsQ	N/A
Pfam	UHGV-1420313_11	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-1420313_11	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-1420313_11	PF13614,MF_00533,NF010443,COG1192	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1420313_13	PF07878	N/A	N/A	N/A	N/A
PHROG	UHGV-1420313_14	phrog_10980	50.2	0.000000000000047	N/A	unknown function
UniRef90	UHGV-1420313_14	UniRef90_G3MA20	67.4	0.00000000000868	Gp279	N/A
KOfam	UHGV-1420313_15	K13525	126.2	1.3e-37	VCP, CDC48; transitional endoplasmic reticulum ATPase	N/A
PHROG	UHGV-1420313_15	phrog_3757	203.0	0	N/A	unknown function
UniRef90	UHGV-1420313_15	UniRef90_A0A4Z0Y6M2	353.0	0	ATP-dependent zinc metalloprotease FtsH 3	N/A
eggNOG-mapper	UHGV-1420313_15	768710.DesyoDRAFT_1087	204.0	0	ATPase family associated with various cellular activities (AAA)	N/A
PADLOC	UHGV-1420313_15	IetA_00002	187.6	0	NA	ietAS
Pfam	UHGV-1420313_15	PF00004	N/A	N/A	ATPase family associated with various cellular activities (AAA)	AAA
COG	UHGV-1420313_15	COG0464	N/A	N/A	AAA+-type ATPase, SpoVK/Ycf46/Vps4 family	N/A
structural_annotation	UHGV-1420313_15	PF00004,MF_00553,TIGR01242,COG1222	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1420313_16	NF010188	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1420313_17	1378168.N510_03079	94.0	1.74e-20	N/A	N/A
eggNOG-mapper	UHGV-1420313_18	1408437.JNJN01000043_gene802	122.0	3.18e-34	N/A	N/A
PHROG	UHGV-1420313_19	phrog_16490	98.9	1.3e-38	N/A	unknown function
eggNOG-mapper	UHGV-1420313_19	1408437.JNJN01000043_gene803	159.0	8.40779e-45	N/A	N/A
PHROG	UHGV-1420313_23	phrog_5765	62.8	3.6e-18	N/A	unknown function
UniRef90	UHGV-1420313_23	UniRef90_UPI001D0EF465	66.6	0.000000000000156	BC1881 family protein	N/A
eggNOG-mapper	UHGV-1420313_23	748727.CLJU_c31430	59.3	0.0000000000146	N/A	N/A
NCBIFam	UHGV-1420313_23	NF033495.1	N/A	N/A	BC1881 family protein	N/A
PHROG	UHGV-1420313_25	phrog_15303	82.5	3.9e-24	N/A	unknown function
PHROG	UHGV-1420313_26	phrog_1863	76.5	1.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-1420313_26	718252.FP2_04900	144.0	2.52234e-44	N/A	N/A
KOfam	UHGV-1420313_27	K07273	164.3	0	acm; lysozyme	N/A
PHROG	UHGV-1420313_27	phrog_291	124.8	8.7e-37	endolysin	lysis
UniRef90	UHGV-1420313_27	UniRef90_UPI001D0EE7D8	301.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-1420313_27	748224.HMPREF9436_00154	274.0	0	hydrolase, family 25	N/A
Pfam	UHGV-1420313_27	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1420313_27	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1420313_27	PF01183,COG3757	N/A	N/A	N/A	N/A
UniRef90	UHGV-1420313_28	UniRef90_A0A844DDG4	99.0	1.99e-26	XkdX family protein	N/A
Pfam	UHGV-1420313_28	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-1420313_28	PF09693,TIGR01669	N/A	N/A	N/A	N/A
KOfam	UHGV-1420313_30	K00986	94.3	1.3e-27	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-1420313_30	phrog_1423	185.6	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1420313_30	UniRef90_A0A844D6B7	701.0	0	Reverse transcriptase domain-containing protein	N/A
eggNOG-mapper	UHGV-1420313_30	1160721.RBI_I01568	217.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-1420313_30	icity0040	88.5	1.2e-25	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-1420313_30	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-1420313_30	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-1420313_30	PF00078,MF_01390,TIGR04416,COG3344	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1420313_32	1226322.HMPREF1545_03569	62.4	0.000000000179	N/A	N/A
structural_annotation	UHGV-1420313_32	PF05635,MF_04067,NF008911	N/A	N/A	N/A	N/A
PHROG	UHGV-1420313_33	phrog_19280	89.1	3.6e-26	N/A	unknown function
UniRef90	UHGV-1420313_33	UniRef90_A0A844DHL3	773.0	0	N/A	N/A
eggNOG-mapper	UHGV-1420313_33	1203606.HMPREF1526_01924	68.2	0.00000000183	N/A	N/A
Pfam	UHGV-1420313_33	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-1420313_33	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-1420313_36	phrog_6616	211.0	0	tail protein	tail
eggNOG-mapper	UHGV-1420313_36	445971.ANASTE_00088	129.0	2.07e-28	N/A	N/A
structural_annotation	UHGV-1420313_36	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1420313_37	phrog_1194	107.3	7.8e-32	N/A	unknown function
eggNOG-mapper	UHGV-1420313_37	1121866.AUGK01000003_gene1438	99.0	4.96e-25	N/A	N/A
Pfam	UHGV-1420313_37	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1420313_37	PF20458,TIGR02126,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-1420313_38	phrog_1535	155.8	0	tail length tape measure protein	tail
UniRef90	UHGV-1420313_38	UniRef90_A0A318EME6	167.0	7.23e-38	Phage-related protein	N/A
eggNOG-mapper	UHGV-1420313_38	1121866.AUGK01000003_gene1437	228.0	0	phage tail tape measure protein	N/A
COG	UHGV-1420313_38	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
eggNOG-mapper	UHGV-1420313_39	1121333.JMLH01000047_gene1011	72.4	0.0000000000000133	N/A	N/A
Pfam	UHGV-1420313_40	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1420313_40	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-1420313_41	phrog_158	44.0	0.0000000000037	major tail protein	tail
UniRef90	UHGV-1420313_41	UniRef90_UPI001D06C8CA	86.3	7.62e-19	phage tail protein	N/A
eggNOG-mapper	UHGV-1420313_41	1449343.JQLQ01000002_gene1514	58.9	0.0000000073	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-1420313_41	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1420313_42	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1420313_44	1298920.KI911353_gene2656	54.3	0.00000016	N/A	N/A
structural_annotation	UHGV-1420313_44	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1420313_45	UniRef90_R6N215	80.1	3e-17	Phage QLRG family putative DNA packaging	N/A
structural_annotation	UHGV-1420313_45	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1420313_46	phrog_29	179.6	0	major head protein	head and packaging
UniRef90	UHGV-1420313_46	UniRef90_A0A2Z4QBB4	373.0	0	Major capsid protein E	N/A
eggNOG-mapper	UHGV-1420313_46	1347368.HG964404_gene4993	260.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1420313_46	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1420313_46	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1420313_49	phrog_64	144.0	8.09951e-43	portal protein	head and packaging
UniRef90	UHGV-1420313_49	UniRef90_A0A371ILT4	328.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1420313_49	1121866.AUGK01000003_gene1429	283.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1420313_49	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1420313_49	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1420313_51	phrog_38	186.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-1420313_51	UniRef90_A0A810QA10	494.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1420313_51	476272.RUMHYD_01940	340.0	0	TIGRFAM Phage	N/A
COG	UHGV-1420313_51	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1420313_51	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1420313	Yes	34,033	50	59	1
UHGV-1802659	No	25,546	47	44	1
UHGV-0118433	No	17,360	49	30	1