vOTU vOTU-025235

vOTU: vOTU-025235

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-025235
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00005 → vGENUS-11452 → vOTU-025235
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1437481
Biosample ID	SAMN03283240
Genome length (bp)	29,053 bps
CheckV completeness	68.51% (Medium-quality)
CDS count	45
CDS density	91.95%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	72	Host agreement	90.28
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 68.51)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1437481_1	phrog_533	71.0	1.2e-20	portal protein	head and packaging
eggNOG-mapper	UHGV-1437481_1	1226322.HMPREF1545_00044	133.0	6.65e-36	N/A	N/A
PHROG	UHGV-1437481_3	phrog_581	289.1	0	minor head protein	head and packaging
UniRef90	UHGV-1437481_3	UniRef90_UPI001D080D49	504.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1437481_3	1226322.HMPREF1545_00046	333.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1437481_3	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1437481_3	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1437481_3	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1437481_4	phrog_2303	48.0	0.00000000000015	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1437481_4	1226322.HMPREF1545_00049	155.0	0	N/A	N/A
PHROG	UHGV-1437481_5	phrog_10	167.8	0	major head protein	head and packaging
UniRef90	UHGV-1437481_5	UniRef90_A0A2U1BEF2	518.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-1437481_5	1226322.HMPREF1545_00050	481.0	0	Phage capsid family	N/A
Pfam	UHGV-1437481_5	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1437481_5	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1437481_5	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1437481_5	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1437481_6	phrog_541	105.9	2.2e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-1437481_6	642492.Clole_0822	65.1	0.0000000000156	N/A	N/A
PHROG	UHGV-1437481_7	phrog_3366	91.2	9.4e-27	N/A	unknown function
eggNOG-mapper	UHGV-1437481_7	1226322.HMPREF1545_00053	156.0	0	N/A	N/A
structural_annotation	UHGV-1437481_7	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1437481_8	phrog_556	75.5	5.3e-22	minor head protein	head and packaging
UniRef90	UHGV-1437481_8	UniRef90_UPI00195E1497	180.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1437481_8	1226322.HMPREF1545_00054	146.0	1.90577e-43	Minor capsid protein	N/A
Pfam	UHGV-1437481_8	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1437481_8	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1437481_9	phrog_3266	61.5	1.2e-17	tail completion	connector
UniRef90	UHGV-1437481_9	UniRef90_A0A2Z4QA01	126.0	5.33e-35	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1437481_9	1232443.BAIA02000078_gene24	185.0	0	N/A	N/A
structural_annotation	UHGV-1437481_9	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1437481_10	phrog_3099	55.2	0.0000000000000013	N/A	unknown function
eggNOG-mapper	UHGV-1437481_10	1235797.C816_04186	145.0	7.9902e-42	N/A	N/A
structural_annotation	UHGV-1437481_10	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1437481_11	phrog_11299	81.9	7.9e-24	N/A	unknown function
eggNOG-mapper	UHGV-1437481_11	693746.OBV_18160	192.0	0	N/A	N/A
structural_annotation	UHGV-1437481_11	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1437481_12	phrog_706	120.2	1.4e-35	N/A	unknown function
UniRef90	UHGV-1437481_12	UniRef90_UPI00164D7633	216.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1437481_12	693746.OBV_18170	194.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1437481_12	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1437481_12	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1437481_13	phrog_1535	81.2	9.8e-38	tail length tape measure protein	tail
UniRef90	UHGV-1437481_13	UniRef90_A0A810PX76	86.7	0.0000000000000582	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1437481_13	693746.OBV_18190	160.0	2.47e-38	domain protein	N/A
COG	UHGV-1437481_13	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1437481_13	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-1437481_14	phrog_1194	77.2	1.6e-22	N/A	unknown function
UniRef90	UHGV-1437481_14	UniRef90_A0A8D9PDT1	119.0	3.19e-32	YolD-like protein	N/A
eggNOG-mapper	UHGV-1437481_14	483218.BACPEC_01144	88.2	1.41e-20	N/A	N/A
Pfam	UHGV-1437481_14	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1437481_14	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1437481_15	phrog_6616	97.5	1.1e-30	tail protein	tail
eggNOG-mapper	UHGV-1437481_15	1262449.CP6013_3213	64.7	0.000000132	Phage minor structural protein	N/A
Pfam	UHGV-1437481_15	PF07902	N/A	N/A	gp58-like protein	Gp58
COG	UHGV-1437481_15	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-1437481_15	PF07902,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1437481_17	PF21683	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1437481_18	762211.BSTEL_0612	134.0	3.32e-35	N/A	N/A
PHROG	UHGV-1437481_22	phrog_240	41.1	0.000000000027	head protein	head and packaging
PHROG	UHGV-1437481_24	phrog_4105	105.3	3e-31	N/A	unknown function
UniRef90	UHGV-1437481_24	UniRef90_A0A8D9UHA9	203.0	0	Holin protein	N/A
eggNOG-mapper	UHGV-1437481_24	411460.RUMTOR_01326	141.0	1.85952e-42	N/A	N/A
PHROG	UHGV-1437481_25	phrog_1129	71.3	8.2e-21	holin	lysis
UniRef90	UHGV-1437481_25	UniRef90_A0A8D9PDD4	162.0	0	Holin	N/A
eggNOG-mapper	UHGV-1437481_25	1226322.HMPREF1545_00069	109.0	4.49e-30	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1437481_25	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1437481_25	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-1437481_26	K01447	89.4	5.1e-26	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1437481_26	phrog_1493	156.6	0	endolysin	lysis
UniRef90	UHGV-1437481_26	UniRef90_A0A350TLR9	293.0	0	Peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-1437481_26	1504823.CCMM01000013_gene2367	216.0	0	Ami_2	N/A
Pfam	UHGV-1437481_26	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1437481_26	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1437481_26	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-1437481_26	PF01510,PF01471,MF_04111,NF008758,COG3023	N/A	N/A	N/A	N/A
PHROG	UHGV-1437481_28	phrog_3754	120.5	9.8e-36	N/A	unknown function
eggNOG-mapper	UHGV-1437481_28	1226322.HMPREF1545_00073	179.0	0	N/A	N/A
PHROG	UHGV-1437481_29	phrog_21718	104.3	1e-30	N/A	unknown function
eggNOG-mapper	UHGV-1437481_29	397290.C810_05210	72.8	0.0000000000000509	N/A	N/A
PHROG	UHGV-1437481_30	phrog_22984	85.7	3.5e-25	N/A	unknown function
PHROG	UHGV-1437481_31	phrog_16490	154.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1437481_31	658655.HMPREF0988_00917	128.0	2.19e-33	N/A	N/A
PHROG	UHGV-1437481_32	phrog_20016	196.3	0	N/A	unknown function
UniRef90	UHGV-1437481_32	UniRef90_A0A285PT46	188.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1437481_32	397290.C810_05214	169.0	0	N/A	N/A
structural_annotation	UHGV-1437481_32	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1437481_33	phrog_28802	66.0	3.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-1437481_33	476272.RUMHYD_01772	52.0	0.00000303	N/A	N/A
structural_annotation	UHGV-1437481_33	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1437481_34	1226322.HMPREF1545_00079	85.5	3.32e-20	N/A	N/A
KOfam	UHGV-1437481_35	K14059	106.8	2.9e-31	int; integrase	N/A
PHROG	UHGV-1437481_35	phrog_1	118.9	4.9e-35	integrase	integration and excision
UniRef90	UHGV-1437481_35	UniRef90_UPI00195CC1EE	323.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1437481_35	1235835.C814_03141	150.0	6.17e-39	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1437481_35	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-1437481_35	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1437481_35	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1437481_35	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
UniRef90	UHGV-1437481_36	UniRef90_A0A8D9UHA6	256.0	0	Helix-turn-helix XRE-family like protein	N/A
Pfam	UHGV-1437481_36	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1437481_36	PF12844,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1437481_37	K07448	119.3	3.3e-35	mrr; restriction system protein	N/A
PHROG	UHGV-1437481_37	phrog_19856	56.7	2.7e-16	N/A	unknown function
UniRef90	UHGV-1437481_37	UniRef90_A0A2Z4Q9W7	239.0	0	Restriction endonuclease	N/A
eggNOG-mapper	UHGV-1437481_37	397290.C810_01426	173.0	0	Restriction endonuclease	N/A
PADLOC	UHGV-1437481_37	ZorD1_00005	73.0	3.1e-21	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-1437481_37	PF09397	N/A	N/A	Ftsk gamma domain	FtsK_gamma
Pfam	UHGV-1437481_37	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-1437481_37	COG1674	N/A	N/A	DNA segregation ATPase FtsK/SpoIIIE or related protein	N/A
COG	UHGV-1437481_39	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1437481_39	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1437481_42	phrog_8	42.9	0.0000000000091	transcriptional regulator	transcription regulation
UniRef90	UHGV-1437481_42	UniRef90_A0A328UFC2	69.3	0.0000000000000381	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1437481_42	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1437481_42	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-1437481_42	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1437481_43	UniRef90_UPI000F0633F9	64.3	0.00000000000379	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1437481_43	693746.OBV_43260	79.3	7.49e-19	N/A	N/A
structural_annotation	UHGV-1437481_43	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
UniRef90	UHGV-1437481_44	UniRef90_A0A8D9UHA1	127.0	1.77e-34	3D containing protein	N/A
PHROG	UHGV-1437481_45	phrog_4433	117.8	9.5e-35	N/A	unknown function
UniRef90	UHGV-1437481_45	UniRef90_A0A6M5C839	100.0	8.09e-24	Putative ADP-ribosyltransferase	N/A
eggNOG-mapper	UHGV-1437481_45	106648.BBLJ01000054_gene3814	98.6	9.72e-25	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1437481_45	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1437481	Yes	29,053	52	69	1
UHGV-1587426	No	18,004	52	42	1
UHGV-0131217	No	17,930	52	42	1
UHGV-0136787	No	11,662	52	28	1