vOTU vOTU-025344

vOTU: vOTU-025344

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-025344
Number of genomes	7
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vGENUS-00190 → vOTU-025344
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0137326
Biosample ID	N/A
Genome length (bp)	33,890 bps
CheckV completeness	80.24% (Medium-quality)
CDS count	63
CDS density	91.98%
tRNA count	4
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	934	Host agreement	98.18
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	19	Host agreement	94.74

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 80.24)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0137326_1	phrog_27197	77.8	1.4e-23	N/A	unknown function
eggNOG-mapper	UHGV-0137326_1	394503.Ccel_3068	59.7	0.00000000345	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0137326_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0137326_1	NF007410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0137326_2	PF10743,NF033787	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0137326_5	PF06718	N/A	N/A	N/A	N/A
PHROG	UHGV-0137326_7	phrog_7838	57.9	2.5e-16	exonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0137326_7	742767.HMPREF9456_02052	74.7	0.00000000000000202	N/A	N/A
PHROG	UHGV-0137326_8	phrog_7838	43.5	0.000000000004	exonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0137326_8	742767.HMPREF9456_02052	53.5	0.000000578	N/A	N/A
KOfam	UHGV-0137326_9	K03111	137.3	1.8e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0137326_9	phrog_44	136.9	1.10001e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0137326_9	UniRef90_D4K451	291.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0137326_9	718252.FP2_06770	291.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0137326_9	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0137326_9	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0137326_9	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0137326_9	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0137326_9	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0137326_10	phrog_5968	74.4	1.7e-21	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0137326_10	UniRef90_UPI001C02E649	401.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-0137326_10	718252.FP2_01000	182.0	0	N/A	N/A
COG	UHGV-0137326_10	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0137326_10	PF09681,MF_01819,TIGR01714,TIGR01446,COG3935	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0137326_11	PF01775,MF_00273,NF001981,COG2157	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0137326_12	PF11998,COG5420	N/A	N/A	N/A	N/A
PHROG	UHGV-0137326_14	phrog_757	52.1	0.00000000000001	DNA methyltransferase	other
UniRef90	UHGV-0137326_14	UniRef90_A0A7J2R6L5	68.9	0.0000000000000216	DNA cytosine methyltransferase (Fragment)	N/A
eggNOG-mapper	UHGV-0137326_14	748224.HMPREF9436_03069	105.0	1.73e-27	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0137326_14	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0137326_15	phrog_757	132.3	2.8e-39	DNA methyltransferase	other
UniRef90	UHGV-0137326_15	UniRef90_UPI001CBD79D0	316.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0137326_15	748224.HMPREF9436_03069	297.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0137326_15	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0137326_18	phrog_3136	136.4	9.60002e-41	N/A	unknown function
UniRef90	UHGV-0137326_18	UniRef90_UPI001C02A61B	195.0	0	ASCH domain-containing protein	N/A
Pfam	UHGV-0137326_18	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0137326_18	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0137326_18	PF04266,MF_00684,NF003443,COG4933	N/A	N/A	N/A	N/A
KOfam	UHGV-0137326_19	K01160	58.7	1.8e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0137326_19	phrog_34	59.1	1e-16	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0137326_19	UniRef90_A0A6N7TND6	221.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0137326_19	875454.BAEW01000002_gene491	135.0	2.37e-39	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0137326_19	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0137326_19	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0137326_19	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0137326_21	phrog_36	52.3	0.000000000000011	transcriptional regulator	transcription regulation
structural_annotation	UHGV-0137326_21	PF07374,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-0137326_23	UniRef90_UPI0018CC2891	114.0	2.36e-29	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0137326_23	1235790.C805_00037	110.0	1.47e-28	N/A	N/A
structural_annotation	UHGV-0137326_23	PF04218	N/A	N/A	N/A	N/A
KOfam	UHGV-0137326_24	K06909	146.3	2.8026e-43	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0137326_24	phrog_10250	178.1	0	N/A	unknown function
UniRef90	UHGV-0137326_24	UniRef90_A0A844D8I4	835.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0137326_24	411490.ANACAC_00783	492.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0137326_24	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0137326_24	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0137326_24	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0137326_24	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0137326_24	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0137326_25	phrog_64	122.7	1.4e-36	portal protein	head and packaging
UniRef90	UHGV-0137326_25	UniRef90_A0A6N7TNT3	872.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0137326_25	1042156.CXIVA_01850	81.6	0.000000000000106	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0137326_25	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0137326_25	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0137326_27	phrog_2468	81.9	6.9e-24	head morphogenesis	head and packaging
UniRef90	UHGV-0137326_27	UniRef90_A0A6N7TLR7	639.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0137326_27	1504822.CCNO01000013_gene286	112.0	1.86e-24	cell adhesion	N/A
Pfam	UHGV-0137326_27	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0137326_27	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0137326_27	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0137326_30	phrog_5	49.8	0.000000000000086	tail completion or Neck1 protein	connector
UniRef90	UHGV-0137326_30	UniRef90_A0A6N7TNP6	296.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0137326_30	1123309.AQYB01000018_gene814	95.1	5.31e-23	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0137326_30	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0137326_30	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0137326_33	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0137326_34	phrog_544	155.4	0	major head protein	head and packaging
UniRef90	UHGV-0137326_34	UniRef90_R0BKA1	458.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0137326_34	476272.RUMHYD_01776	340.0	0	N/A	N/A
structural_annotation	UHGV-0137326_34	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0137326_36	phrog_17977	44.2	0.0000000000029	N/A	unknown function
structural_annotation	UHGV-0137326_36	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0137326_37	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-0137326_38	phrog_885	57.2	2.1e-16	major tail protein	tail
eggNOG-mapper	UHGV-0137326_38	1504822.CCNO01000012_gene492	100.0	1.25e-23	N/A	N/A
structural_annotation	UHGV-0137326_38	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0137326_41	phrog_28775	121.0	9.1e-36	tail length tape measure protein	tail
UniRef90	UHGV-0137326_41	UniRef90_A0A844DDD5	654.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0137326_41	1492737.FEM08_12070	140.0	6.82e-32	tape measure	N/A
Pfam	UHGV-0137326_41	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0137326_41	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0137326_41	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0137326_41	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0137326_42	phrog_3558	274.2	0	tail protein	tail
UniRef90	UHGV-0137326_42	UniRef90_UPI001C01D15B	682.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0137326_42	1120933.ATUY01000002_gene164	156.0	9.66e-38	Prophage endopeptidase tail	N/A
Pfam	UHGV-0137326_42	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0137326_42	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0137326_42	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0137326_43	1235792.C808_00094	90.5	7.25e-20	phage tail	N/A
COG	UHGV-0137326_43	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0137326_43	PF05709,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0137326_45	phrog_10993	145.1	0	Hoc-like head decoration	head and packaging
UniRef90	UHGV-0137326_45	UniRef90_A0A1Q6KPN8	214.0	0	N/A	N/A
eggNOG-mapper	UHGV-0137326_45	718252.FP2_16970	182.0	0	N/A	N/A
structural_annotation	UHGV-0137326_45	PF19789,PF18911	N/A	N/A	N/A	N/A
UniRef90	UHGV-0137326_47	UniRef90_UPI001D07AB37	84.3	1.76e-20	XkdX family protein	N/A
eggNOG-mapper	UHGV-0137326_47	718252.FP2_16990	81.3	4.91e-20	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-0137326_47	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-0137326_47	PF09693	N/A	N/A	N/A	N/A
KOfam	UHGV-0137326_48	K07273	154.4	1.4013e-45	acm; lysozyme	N/A
PHROG	UHGV-0137326_48	phrog_291	109.8	2.9e-32	endolysin	lysis
UniRef90	UHGV-0137326_48	UniRef90_A0A564U0D3	502.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0137326_48	718252.FP2_04890	250.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0137326_48	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0137326_48	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0137326_48	PF01183,NF007404,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0137326_50	phrog_15303	76.5	2.9e-22	N/A	unknown function
structural_annotation	UHGV-0137326_52	PF07374,MF_00245,NF001072,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0137326_53	phrog_5765	66.9	1.9e-19	N/A	unknown function
UniRef90	UHGV-0137326_53	UniRef90_UPI001D0EF465	69.3	0.0000000000000133	BC1881 family protein	N/A
eggNOG-mapper	UHGV-0137326_53	1095750.HMPREF9970_1008	58.5	0.0000000000296	N/A	N/A
NCBIFam	UHGV-0137326_53	NF033495.1	N/A	N/A	BC1881 family protein	N/A
KOfam	UHGV-0137326_54	K23779	58.7	1.5e-16	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0137326_54	phrog_1373	43.6	0.0000000000036	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0137326_54	944479.JQLX01000018_gene150	56.2	0.000000167	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0137326_54	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0137326_54	COG0662	N/A	N/A	Mannose-6-phosphate isomerase, cupin superfamily	N/A
structural_annotation	UHGV-0137326_54	PF01381,TIGR03070,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0137326_56	phrog_3754	98.5	6.7e-29	N/A	unknown function
eggNOG-mapper	UHGV-0137326_56	1235790.C805_00054	114.0	3.35e-31	N/A	N/A
PHROG	UHGV-0137326_57	phrog_21718	90.4	2.2e-26	N/A	unknown function
eggNOG-mapper	UHGV-0137326_57	397290.C810_05210	82.4	1.04e-17	N/A	N/A
PHROG	UHGV-0137326_58	phrog_22984	70.0	3.3e-20	N/A	unknown function
PHROG	UHGV-0137326_59	phrog_16490	196.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0137326_59	397290.C810_01328	125.0	2.89e-31	N/A	N/A
PHROG	UHGV-0137326_61	phrog_20016	202.4	0	N/A	unknown function
UniRef90	UHGV-0137326_61	UniRef90_A0A285PT46	205.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0137326_61	1226322.HMPREF1545_00077	176.0	0	N/A	N/A
structural_annotation	UHGV-0137326_61	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0137326_62	PF12510	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0137326	Yes	33,890	56	80	1
UHGV-1461335	No	33,890	56	80	1
UHGV-0186248	No	22,501	55	53	1
UHGV-1419558	No	22,501	55	53	1
UHGV-0069658	No	22,501	55	53	1
UHGV-1459184	No	22,501	55	53	1
UHGV-2026860	No	19,913	55	47	1