vOTU vOTU-025367

vOTU: vOTU-025367

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-025367
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00008 → vSUBFAM-00061 → vGENUS-00169 → vOTU-025367
Host lineage	Bacteria → Firmicutes_C → Negativicutes → Veillonellales → Veillonellaceae → Veillonella → Veillonella parvula_A
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1513545
Biosample ID	SAMEA2582033
Genome length (bp)	33,712 bps
CheckV completeness	81.60% (Medium-quality)
CDS count	41
CDS density	97.06%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Veillonellales → Veillonellaceae → Veillonella → Veillonella parvula_A	Total connections	35	Host agreement	71.43
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 81.6)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1513545_3	K03111	147.9	9.94922e-44	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1513545_3	phrog_44	126.9	1.6e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1513545_3	UniRef90_UPI0019613F2D	237.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1513545_3	936589.HMPREF1521_1228	193.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1513545_3	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1513545_3	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1513545_3	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1513545_3	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1513545_3	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1513545_4	PF16857,MF_00273	N/A	N/A	N/A	N/A
PHROG	UHGV-1513545_5	phrog_1672	52.6	0.0000000000000045	N/A	unknown function
UniRef90	UHGV-1513545_5	UniRef90_F5L204	89.4	4.04e-20	Conserved domain protein	N/A
PHROG	UHGV-1513545_6	phrog_11227	177.1	0	protease	other
UniRef90	UHGV-1513545_6	UniRef90_A0A8J6Z9T4	149.0	7.00649e-44	Membrane protease subunit	N/A
eggNOG-mapper	UHGV-1513545_6	716544.wcw_0668	121.0	1.5e-33	N/A	N/A
KOfam	UHGV-1513545_7	K00571	118.1	1e-34	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1513545_7	phrog_67	98.6	3.7e-30	DNA methyltransferase	other
UniRef90	UHGV-1513545_7	UniRef90_UPI00196047F8	519.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-1513545_7	749222.Nitsa_1817	389.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-1513545_7	MTase_II_00157	98.4	1.7e-29	Type II methyltransferase	RM
Pfam	UHGV-1513545_7	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1513545_7	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1513545_7	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1513545_8	phrog_918	102.8	1.5e-30	N/A	unknown function
UniRef90	UHGV-1513545_8	UniRef90_UPI001960DED1	175.0	0	N/A	N/A
eggNOG-mapper	UHGV-1513545_8	1401067.HMPREF0872_03440	104.0	2.86e-28	N/A	N/A
Pfam	UHGV-1513545_8	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1513545_8	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-1513545_9	phrog_244	77.6	2.1e-22	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1513545_9	UniRef90_A0A841R0Q1	118.0	3.52e-32	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1513545_9	1200557.JHWV01000001_gene280	127.0	5.01e-36	N/A	N/A
structural_annotation	UHGV-1513545_9	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-1513545_10	K01520	152.6	2.8026e-45	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1513545_10	phrog_135	154.3	0	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1513545_10	UniRef90_UPI001D0616FF	259.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-1513545_10	883156.HMPREF9282_00525	129.0	1.39e-35	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	N/A
Pfam	UHGV-1513545_10	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1513545_10	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-1513545_10	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1513545_10	PF00692,MF_00116,NF001862,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-1513545_16	phrog_21026	118.1	4.3e-35	N/A	unknown function
PHROG	UHGV-1513545_18	phrog_36	42.2	0.000000000014	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1513545_18	706434.HMPREF9429_00383	55.1	0.000000207	N/A	N/A
structural_annotation	UHGV-1513545_18	PF07374	N/A	N/A	N/A	N/A
KOfam	UHGV-1513545_21	K07474	130.8	1.9e-38	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1513545_21	phrog_51	136.1	1.6e-40	terminase small subunit	head and packaging
UniRef90	UHGV-1513545_21	UniRef90_A0A496PEP2	248.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1513545_21	1235800.C819_00494	120.0	9.34e-33	Terminase small subunit	N/A
Pfam	UHGV-1513545_21	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1513545_21	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1513545_21	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1513545_22	phrog_5902	249.3	0	N/A	unknown function
UniRef90	UHGV-1513545_22	UniRef90_UPI0018C4A0E6	582.0	0	terminase	N/A
eggNOG-mapper	UHGV-1513545_22	1200557.JHWV01000001_gene277	574.0	0	Terminase RNaseH-like domain	N/A
COG	UHGV-1513545_22	COG0507	N/A	N/A	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-1513545_22	PF03237,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1513545_24	phrog_332	494.1	0	head-tail adaptor	connector
UniRef90	UHGV-1513545_24	UniRef90_UPI001D07F371	776.0	0	portal protein	N/A
eggNOG-mapper	UHGV-1513545_24	1401067.HMPREF0872_06810	601.0	0	Bacteriophage head to tail connecting protein	N/A
Pfam	UHGV-1513545_24	PF12236	N/A	N/A	Bacteriophage head to tail connecting protein	Head-tail_con
structural_annotation	UHGV-1513545_24	PF12236,MF_04120,TIGR01538,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1513545_25	phrog_528	87.5	6.6e-26	N/A	unknown function
eggNOG-mapper	UHGV-1513545_25	1401067.HMPREF0872_06805	89.0	1.06e-21	N/A	N/A
PHROG	UHGV-1513545_26	phrog_458	144.4	9.40271e-43	protease	other
UniRef90	UHGV-1513545_26	UniRef90_A0A7X8Z540	60.8	0.0000000738	Protease	N/A
eggNOG-mapper	UHGV-1513545_26	1401067.HMPREF0872_06800	107.0	4.5e-26	N/A	N/A
PHROG	UHGV-1513545_27	phrog_212	159.3	0	major head protein	head and packaging
UniRef90	UHGV-1513545_27	UniRef90_Q775C7	366.0	0	Bbp17	N/A
eggNOG-mapper	UHGV-1513545_27	1401067.HMPREF0872_06795	400.0	0	N/A	N/A
Pfam	UHGV-1513545_27	PF20911	N/A	N/A	Major capsid protein GP7	GP7
structural_annotation	UHGV-1513545_27	PF20911,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1513545_28	phrog_427	71.2	1.5e-20	N/A	unknown function
structural_annotation	UHGV-1513545_28	PF21190	N/A	N/A	N/A	N/A
PHROG	UHGV-1513545_30	phrog_394	177.1	0	tail protein	tail
UniRef90	UHGV-1513545_30	UniRef90_A0A0U1KW64	101.0	2.28e-23	N/A	N/A
eggNOG-mapper	UHGV-1513545_30	1401067.HMPREF0872_06780	202.0	0	N/A	N/A
structural_annotation	UHGV-1513545_30	PF17212	N/A	N/A	N/A	N/A
PHROG	UHGV-1513545_31	phrog_376	726.4	0	tail protein	tail
UniRef90	UHGV-1513545_31	UniRef90_A0A0U1KV93	357.0	0	N/A	N/A
eggNOG-mapper	UHGV-1513545_31	1401067.HMPREF0872_06775	679.0	0	N/A	N/A
structural_annotation	UHGV-1513545_31	PF11134,MF_00923,TIGR03300,COG2706	N/A	N/A	N/A	N/A
PHROG	UHGV-1513545_32	phrog_308	98.4	6.8e-29	internal virion protein	head and packaging
UniRef90	UHGV-1513545_32	UniRef90_UPI001D08FF44	172.0	0	N/A	N/A
structural_annotation	UHGV-1513545_32	PF11039,MF_02210,NF000165,COG1247	N/A	N/A	N/A	N/A
PHROG	UHGV-1513545_33	phrog_418	65.2	1.1e-18	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1513545_33	1401067.HMPREF0872_06765	178.0	0	N/A	N/A
structural_annotation	UHGV-1513545_33	PF05384,TIGR01010,COG3524	N/A	N/A	N/A	N/A
UniRef90	UHGV-1513545_34	UniRef90_UPI001962220E	1394.0	0	transglycosylase SLT domain-containing protein	N/A
eggNOG-mapper	UHGV-1513545_34	1123288.SOV_2c10740	126.0	3.61e-27	N/A	N/A
Pfam	UHGV-1513545_34	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
structural_annotation	UHGV-1513545_34	PF01464,COG0741	N/A	N/A	N/A	N/A
KOfam	UHGV-1513545_35	K20478	75.9	3.7e-23	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-1513545_35	phrog_9880	243.0	0	N/A	unknown function
UniRef90	UHGV-1513545_35	UniRef90_D1YMD8	3699.0	0	MuF_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1513545_35	699218.HMPREF0889_0277	459.0	0	N/A	N/A
Pfam	UHGV-1513545_35	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
UniRef90	UHGV-1513545_36	UniRef90_UPI001D087ED4	1543.0	0	glycoside hydrolase family 55 protein	N/A
Pfam	UHGV-1513545_36	PF12708	N/A	N/A	Pectate lyase superfamily protein	Pectate_lyase_3
COG	UHGV-1513545_36	COG5434	N/A	N/A	Polygalacturonase	N/A
structural_annotation	UHGV-1513545_36	PF05096,PF03906,MF_03008,TIGR03866,COG3204	N/A	N/A	N/A	N/A
PHROG	UHGV-1513545_38	phrog_23091	278.1	0	N/A	unknown function
structural_annotation	UHGV-1513545_38	PF05105,NF035928	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1513545_39	568816.Acin_1951	48.9	0.000000396	N/A	N/A
PHROG	UHGV-1513545_40	phrog_26249	75.4	3.1e-22	N/A	unknown function
UniRef90	UHGV-1513545_40	UniRef90_UPI001D017339	145.0	1.01e-39	chitosanase	N/A
eggNOG-mapper	UHGV-1513545_40	546273.VEIDISOL_01083	240.0	0	LysM domain	N/A
Pfam	UHGV-1513545_40	PF21277	N/A	N/A	Type VI secretion system spike protein VgrG3-like, C-terminal	T6SS_VgrG3-like_C
COG	UHGV-1513545_40	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1513545_40	PF21277	N/A	N/A	N/A	N/A
PHROG	UHGV-1513545_41	phrog_10797	241.2	0	N/A	unknown function
UniRef90	UHGV-1513545_41	UniRef90_A0A1B1I041	144.0	6.18001e-40	Glycoprotease	N/A
eggNOG-mapper	UHGV-1513545_41	883156.HMPREF9282_01266	157.0	0	N/A	N/A
structural_annotation	UHGV-1513545_41	PF06531	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1513545	Yes	33,712	38	82	1
UHGV-1462244	No	22,447	39	54	1
UHGV-1594845	No	11,735	40	28	1