vOTU vOTU-025492

vOTU: vOTU-025492

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-025492
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-01599 → vOTU-025492
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Hungatella → Hungatella sp005845265
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1545140
Biosample ID	SAMEA3708698
Genome length (bp)	29,484 bps
CheckV completeness	78.07% (Medium-quality)
CDS count	54
CDS density	89.25%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Hungatella → Hungatella sp005845265	Total connections	75	Host agreement	81.33
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Hungatella	Total connections	14	Host agreement	71.43

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 78.07)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1545140_1	UniRef90_A0A154BV14	140.0	6.81031e-42	RNAase	N/A
eggNOG-mapper	UHGV-1545140_1	411463.EUBVEN_00040	155.0	0	N/A	N/A
KOfam	UHGV-1545140_2	K14059	160.8	0	int; integrase	N/A
PHROG	UHGV-1545140_2	phrog_1	132.3	4.3e-39	integrase	integration and excision
UniRef90	UHGV-1545140_2	UniRef90_D9R5C3	553.0	0	Integrase family protein	N/A
eggNOG-mapper	UHGV-1545140_2	610130.Closa_0703	553.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-1545140_2	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
COG	UHGV-1545140_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1545140_2	PF00589,MF_01808,TIGR02225,NF041908,COG4974,COG3422	N/A	N/A	N/A	N/A
KOfam	UHGV-1545140_4	K18830	75.4	1e-21	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1545140_4	phrog_8	63.4	4.6e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-1545140_4	UniRef90_UPI001D075DED	201.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1545140_4	610130.Closa_0705	103.0	1.89e-26	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1545140_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1545140_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1545140_4	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1545140_8	UniRef90_UPI001C035907	213.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1545140_8	610130.Closa_0711	56.6	0.0000000102	N/A	N/A
structural_annotation	UHGV-1545140_8	PF21531,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-1545140_11	phrog_2562	150.4	1.26117e-44	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1545140_11	UniRef90_UPI0018A105EA	544.0	0	N/A	N/A
eggNOG-mapper	UHGV-1545140_11	1235790.C805_00030	348.0	0	N/A	N/A
Pfam	UHGV-1545140_11	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-1545140_11	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
KOfam	UHGV-1545140_12	K02315	136.5	2.2e-40	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1545140_12	phrog_50	134.6	8.20001e-40	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1545140_12	UniRef90_UPI00189C63B9	455.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1545140_12	476272.RUMHYD_03359	223.0	0	DNA-dependent DNA replication	N/A
Pfam	UHGV-1545140_12	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-1545140_12	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1545140_12	PF01695,MF_00377,NF005992,COG1484	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1545140_15	411468.CLOSCI_00572	69.7	0.0000000000000263	N/A	N/A
KOfam	UHGV-1545140_22	K00571	122.6	4e-36	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1545140_22	phrog_67	103.4	9.2e-32	DNA methyltransferase	other
UniRef90	UHGV-1545140_22	UniRef90_A0A6N7WPG8	531.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1545140_22	411468.CLOSCI_00299	414.0	0	DNA methylase	N/A
PADLOC	UHGV-1545140_22	MTase_II_00157	99.1	8e-30	Type II methyltransferase	RM
Pfam	UHGV-1545140_22	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1545140_22	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1545140_22	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1545140_23	1235802.C823_04650	50.1	0.000000176	N/A	N/A
KOfam	UHGV-1545140_24	K22300	45.3	0.0000000000016	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-1545140_24	UniRef90_UPI00164E36FC	117.0	3.19e-33	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1545140_24	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1545140_24	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1545140_24	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1545140_25	phrog_8538	139.6	1.19993e-41	N/A	unknown function
eggNOG-mapper	UHGV-1545140_25	1196322.A370_02189	133.0	3.32e-38	N/A	N/A
PHROG	UHGV-1545140_26	phrog_2600	133.4	2e-39	N/A	unknown function
eggNOG-mapper	UHGV-1545140_26	1178540.BA70_18565	160.0	0	N/A	N/A
structural_annotation	UHGV-1545140_27	PF11132,NF007981	N/A	N/A	N/A	N/A
UniRef90	UHGV-1545140_28	UniRef90_A0A413WS40	102.0	8.26e-28	Ribbon-helix-helix protein, CopG family	N/A
structural_annotation	UHGV-1545140_28	PF01402,NF041793,COG3905	N/A	N/A	N/A	N/A
KOfam	UHGV-1545140_30	K03733	204.3	0	xerC; integrase/recombinase XerC	N/A
PHROG	UHGV-1545140_30	phrog_1	153.2	2.8026e-45	integrase	integration and excision
UniRef90	UHGV-1545140_30	UniRef90_A0A174XQN6	673.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-1545140_30	657309.BXY_36580	239.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1545140_30	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-1545140_30	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1545140_30	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1545140_30	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1545140_31	PF04936	N/A	N/A	N/A	N/A
PHROG	UHGV-1545140_32	phrog_6568	82.6	2.9e-24	N/A	unknown function
eggNOG-mapper	UHGV-1545140_32	742740.HMPREF9474_02283	55.5	0.00000000148	N/A	N/A
PHROG	UHGV-1545140_33	phrog_36	41.4	0.000000000025	transcriptional regulator	transcription regulation
UniRef90	UHGV-1545140_33	UniRef90_A0A174XW92	282.0	0	Phage transcriptional regulator, RinA family	N/A
eggNOG-mapper	UHGV-1545140_33	1122919.KB905569_gene2945	55.8	0.0000000645	Transcriptional regulator, RinA family	N/A
NCBIFam	UHGV-1545140_33	TIGR01636.1	N/A	N/A	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-1545140_33	PF05263,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-1545140_34	K04763	117.3	1.8e-34	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1545140_34	phrog_216	176.8	0	integrase	integration and excision
UniRef90	UHGV-1545140_34	UniRef90_A0A174XIE7	357.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-1545140_34	1235793.C809_02656	233.0	0	PFAM Phage integrase family	N/A
Pfam	UHGV-1545140_34	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1545140_34	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1545140_34	PF00589,MF_02055,NF040815,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-1545140_36	phrog_119	52.3	0.0000000000000078	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1545140_36	UniRef90_A0A174XSZ8	247.0	0	Prophage LambdaBa04, GP54	N/A
eggNOG-mapper	UHGV-1545140_36	318464.IO99_13775	127.0	8.79e-37	HNH nucleases	N/A
COG	UHGV-1545140_36	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1545140_37	phrog_1066	88.6	4.9e-26	N/A	unknown function
eggNOG-mapper	UHGV-1545140_37	1235793.C809_01916	169.0	0	N/A	N/A
structural_annotation	UHGV-1545140_37	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1545140_38	phrog_9	399.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-1545140_38	UniRef90_A0A174XWB0	1155.0	0	Phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-1545140_38	1235793.C809_01917	892.0	0	Phage Terminase	N/A
Pfam	UHGV-1545140_38	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1545140_38	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1545140_38	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1545140_38	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1545140_39	phrog_12	192.7	0	portal protein	head and packaging
UniRef90	UHGV-1545140_39	UniRef90_A0A174XIL2	828.0	0	Prophage lambdaBa04, portal protein	N/A
eggNOG-mapper	UHGV-1545140_39	1235793.C809_01918	513.0	0	Phage portal protein	N/A
Pfam	UHGV-1545140_39	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1545140_39	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1545140_39	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1545140_40	K01358	134.4	1.2e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1545140_40	phrog_94	217.9	0	head maturation protease	head and packaging
UniRef90	UHGV-1545140_40	UniRef90_A0A174XQS2	460.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-1545140_40	1280689.AUJC01000011_gene1520	217.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1545140_40	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1545140_40	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1545140_40	PF00574,MF_00444,NF011091,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1545140_41	phrog_10	173.8	0	major head protein	head and packaging
UniRef90	UHGV-1545140_41	UniRef90_A0A174XIH6	759.0	0	Phage major capsid protein, HK97 family	N/A
eggNOG-mapper	UHGV-1545140_41	1280689.AUJC01000011_gene1521	451.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1545140_41	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1545140_41	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1545140_41	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1545140_41	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1545140_42	phrog_5223	70.6	1.6e-20	neck protein	connector
UniRef90	UHGV-1545140_42	UniRef90_A0A174XSK5	185.0	0	N/A	N/A
eggNOG-mapper	UHGV-1545140_42	411465.PEPMIC_00737	87.0	2.41e-21	N/A	N/A
structural_annotation	UHGV-1545140_42	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1545140_43	596315.HMPREF0634_0222	48.5	0.0000071	head-tail adaptor	N/A
COG	UHGV-1545140_43	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1545140_43	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1545140_44	TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1545140_45	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1545140_46	phrog_88	103.8	1.4e-30	major tail protein	tail
UniRef90	UHGV-1545140_46	UniRef90_A0A174XIJ5	397.0	0	Phi13 family phage major tail protein	N/A
eggNOG-mapper	UHGV-1545140_46	742740.HMPREF9474_04299	233.0	0	N/A	N/A
NCBIFam	UHGV-1545140_46	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1545140_46	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1545140_49	742740.HMPREF9474_04296	87.0	2.61e-19	Phage tail tape measure protein TP901	N/A
COG	UHGV-1545140_49	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
KOfam	UHGV-1545140_50	K06909	241.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1545140_50	phrog_5653	114.0	5.9e-34	terminase large subunit	head and packaging
UniRef90	UHGV-1545140_50	UniRef90_UPI00189A6221	677.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1545140_50	762982.HMPREF9442_01173	552.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1545140_50	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1545140_50	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
COG	UHGV-1545140_50	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1545140_50	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1545140_51	phrog_64	218.6	0	portal protein	head and packaging
UniRef90	UHGV-1545140_51	UniRef90_UPI001294C0B3	833.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1545140_51	742767.HMPREF9456_03336	485.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1545140_51	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1545140_51	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1545140_52	phrog_5824	168.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1545140_52	1347393.HG726021_gene482	177.0	0	N/A	N/A
PHROG	UHGV-1545140_53	phrog_9196	191.3	0	N/A	unknown function
UniRef90	UHGV-1545140_53	UniRef90_UPI0012969B58	306.0	0	head fiber protein	N/A
eggNOG-mapper	UHGV-1545140_53	1227266.HMPREF1551_00513	194.0	0	Head fiber protein	N/A
Pfam	UHGV-1545140_53	PF11133	N/A	N/A	Head fiber protein	Phage_head_fibr
structural_annotation	UHGV-1545140_53	PF21430,NF009633	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1545140_54	742767.HMPREF9456_03319	211.0	0	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1545140	Yes	29,484	43	78	1
UHGV-0098408	No	28,679	43	76	1
UHGV-1486196	No	19,680	42	54	1
UHGV-1594729	No	17,087	41	37	1