vOTU vOTU-025704

vOTU: vOTU-025704

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-025704
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00116 → vOTU-025704
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1530882
Biosample ID	SAMEA2738137
Genome length (bp)	19,691 bps
CheckV completeness	58.89% (Medium-quality)
CDS count	20
CDS density	95.74%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	11	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 58.89)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1530882_1	K00689	48.2	4e-17	E2.4.1.5; dextransucrase [EC:2.4.1.5]	N/A
PHROG	UHGV-1530882_1	phrog_1110	364.2	0	endolysin	lysis
UniRef90	UHGV-1530882_1	UniRef90_A0A0A0YV41	534.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1530882_1	365659.smi_0478	541.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1530882_1	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1530882_1	PF01473	N/A	N/A	Putative cell wall binding repeat	Choline_bind_1
Pfam	UHGV-1530882_1	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1530882_1	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-1530882_1	PF19127,PF01510,TIGR04035,COG5263	N/A	N/A	N/A	N/A
PHROG	UHGV-1530882_2	phrog_608	138.2	2.29995e-41	holin	lysis
UniRef90	UHGV-1530882_2	UniRef90_A0A0Y3MR10	192.0	0	Phage holin, LL-H family	N/A
eggNOG-mapper	UHGV-1530882_2	936580.HMPREF1516_0703	172.0	0	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1530882_2	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
NCBIFam	UHGV-1530882_2	TIGR01673.1	N/A	N/A	phage holin	N/A
PHROG	UHGV-1530882_3	phrog_199	57.3	2e-16	holin	lysis
UniRef90	UHGV-1530882_3	UniRef90_A0A3R9KVL9	246.0	0	Holin family protein	N/A
eggNOG-mapper	UHGV-1530882_3	413066.A1EAB5_9CAUD	160.0	0	Pfam:Phage_holin_4_1	N/A
Pfam	UHGV-1530882_3	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1530882_3	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-1530882_3	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1530882_4	phrog_1554	245.6	0	N/A	unknown function
UniRef90	UHGV-1530882_4	UniRef90_A0A139Q9H9	356.0	0	N/A	N/A
eggNOG-mapper	UHGV-1530882_4	1035189.HMPREF9954_1920	225.0	0	N/A	N/A
structural_annotation	UHGV-1530882_4	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1530882_5	phrog_12683	112.8	1.3e-33	N/A	unknown function
PHROG	UHGV-1530882_6	phrog_1210	680.4	0	PblB-type receptor binding	other
UniRef90	UHGV-1530882_6	UniRef90_A0A2N6PNN1	1913.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1530882_6	1566990.A0A0A0YV37_9CAUD	1506.0	0	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-1530882_6	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1530882_6	PF02018	N/A	N/A	Carbohydrate binding domain	CBM_4_9
Pfam	UHGV-1530882_6	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-1530882_6	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
structural_annotation	UHGV-1530882_6	PF14594,PF00629,PF10528,TIGR01665,NF033675,NF038393,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1530882_7	phrog_33	49.4	0.000000000000081	distal tail protein Dit	tail
UniRef90	UHGV-1530882_7	UniRef90_UPI001EFF5C66	329.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1530882_7	1123314.AUIO01000016_gene850	333.0	0	N/A	N/A
structural_annotation	UHGV-1530882_7	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1530882_8	phrog_5755	399.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1530882_8	UniRef90_A0A4D6B1B7	1269.0	0	Tail length tape-measure protein	N/A
eggNOG-mapper	UHGV-1530882_8	644007.C5J971_9CAUD	1025.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-1530882_8	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1530882_8	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
structural_annotation	UHGV-1530882_8	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1530882_9	phrog_709	118.5	3e-35	N/A	unknown function
UniRef90	UHGV-1530882_9	UniRef90_A0A0E4CSV4	158.0	0	Prophage pi2 protein 40	N/A
eggNOG-mapper	UHGV-1530882_9	1035184.HMPREF1042_1216	160.0	0	N/A	N/A
structural_annotation	UHGV-1530882_9	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1530882_10	phrog_88	157.2	0	major tail protein	tail
UniRef90	UHGV-1530882_10	UniRef90_A0A7G1ITF4	387.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1530882_10	1005705.HMPREF9967_1048	305.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1530882_10	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1530882_10	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-1530882_11	UniRef90_T0U477	123.0	1.72e-34	Prophage pi2 protein 38	N/A
eggNOG-mapper	UHGV-1530882_11	644007.C5J968_9CAUD	134.0	2.24e-39	aminopeptidase activity	N/A
structural_annotation	UHGV-1530882_11	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1530882_12	phrog_5	44.2	0.0000000000048	tail completion or Neck1 protein	connector
UniRef90	UHGV-1530882_12	UniRef90_UPI00195EB731	142.0	9.99967e-42	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1530882_12	1123314.AUIO01000016_gene844	147.0	1.54143e-44	N/A	N/A
Pfam	UHGV-1530882_12	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1530882_12	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1530882_13	phrog_1951	112.7	1.4e-33	head-tail adaptor	connector
UniRef90	UHGV-1530882_13	UniRef90_UPI001956060B	158.0	0	phage head closure protein	N/A
eggNOG-mapper	UHGV-1530882_13	1005705.HMPREF9967_1045	142.0	5.91348e-43	head-tail adaptor	N/A
NCBIFam	UHGV-1530882_13	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1530882_13	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1530882_13	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1530882_14	phrog_2550	125.9	7e-38	N/A	unknown function
UniRef90	UHGV-1530882_14	UniRef90_A0A0T8BHT1	137.0	9.96001e-41	N/A	N/A
eggNOG-mapper	UHGV-1530882_14	644007.C5J965_9CAUD	129.0	5.37e-38	Phage gp6-like head-tail connector protein	N/A
structural_annotation	UHGV-1530882_14	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1530882_15	phrog_3673	71.4	7.9e-21	Arc-like repressor	transcription regulation
UniRef90	UHGV-1530882_15	UniRef90_A0A098ANL2	78.6	2.02e-17	N/A	N/A
eggNOG-mapper	UHGV-1530882_15	491915.Aflv_0665	49.7	0.000000417	N/A	N/A
PHROG	UHGV-1530882_16	phrog_10	185.8	0	major head protein	head and packaging
UniRef90	UHGV-1530882_16	UniRef90_UPI00066D2D6B	604.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1530882_16	1316408.HSISM1_1054	353.0	0	capsid protein	N/A
Pfam	UHGV-1530882_16	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1530882_16	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1530882_16	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1530882_16	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1530882_17	K06904	134.4	1.1e-39	N/A	N/A
PHROG	UHGV-1530882_17	phrog_80	169.1	0	head maturation protease	head and packaging
UniRef90	UHGV-1530882_17	UniRef90_A0A098ANM2	363.0	0	Bacteriophage maturation protease	N/A
eggNOG-mapper	UHGV-1530882_17	1005705.HMPREF9967_1041	340.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-1530882_17	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1530882_17	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1530882_17	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1530882_17	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1530882_18	phrog_12	186.8	0	portal protein	head and packaging
UniRef90	UHGV-1530882_18	UniRef90_A0A7G1IQG3	761.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1530882_18	1123314.AUIO01000016_gene838	622.0	0	Phage portal protein	N/A
Pfam	UHGV-1530882_18	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1530882_18	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1530882_18	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1530882_18	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1530882_19	phrog_9	339.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-1530882_19	UniRef90_A0A7G1IQ86	1138.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1530882_19	644007.C5J959_9CAUD	1084.0	0	Phage Terminase	N/A
Pfam	UHGV-1530882_19	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1530882_19	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
structural_annotation	UHGV-1530882_19	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1530882_20	phrog_361	146.8	6.02558e-44	terminase small subunit	head and packaging
UniRef90	UHGV-1530882_20	UniRef90_A0A414CIM9	209.0	0	POU-specific domain-containing protein	N/A
eggNOG-mapper	UHGV-1530882_20	1005705.HMPREF9967_1038	233.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-1530882_20	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-1530882_20	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1530882_20	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1530882	Yes	19,691	41	59	1
UHGV-1827361	No	16,076	41	48	1
UHGV-1548270	No	10,128	41	30	1