vOTU vOTU-026075

vOTU: vOTU-026075

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-026075
Number of genomes	5
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → CAG-127 → CAG-127 sp900319515
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00491 → vOTU-026075
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1997333
Biosample ID	SAMEA2580048
Genome length (bp)	29,866 bps
CheckV completeness	51.20% (Medium-quality)
CDS count	62
CDS density	90.61%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	823	Host agreement	99.51
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → CAG-127 → CAG-127 sp900319515	Total connections	5	Host agreement	80

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 51.2)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1997333_3	K07727	44.0	0.0000000000053	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-1997333_3	UniRef90_A0A3D5LSI5	133.0	2.01e-39	Cro/Cl family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1997333_3	411470.RUMGNA_00075	97.1	1.05e-25	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1997333_3	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1997333_3	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1997333_5	phrog_11100	99.4	2.1e-29	N/A	unknown function
eggNOG-mapper	UHGV-1997333_5	1283077.M1ICI7_9CAUD	50.1	0.0000042	N/A	N/A
structural_annotation	UHGV-1997333_7	PF10944	N/A	N/A	N/A	N/A
PHROG	UHGV-1997333_9	phrog_1233	49.2	0.000000000000089	N/A	unknown function
eggNOG-mapper	UHGV-1997333_9	658655.HMPREF0988_00914	97.1	9.77e-25	N/A	N/A
eggNOG-mapper	UHGV-1997333_10	658655.HMPREF0988_00915	71.2	0.00000000000286	N/A	N/A
PHROG	UHGV-1997333_11	phrog_20016	230.8	0	N/A	unknown function
UniRef90	UHGV-1997333_11	UniRef90_A0A285PT46	167.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1997333_11	397290.C810_05214	232.0	0	N/A	N/A
structural_annotation	UHGV-1997333_11	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1997333_13	phrog_16490	179.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1997333_13	397290.C810_01328	185.0	0	N/A	N/A
PHROG	UHGV-1997333_15	phrog_21718	62.0	9.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-1997333_15	658655.HMPREF0988_00919	110.0	1.29e-28	N/A	N/A
structural_annotation	UHGV-1997333_15	NF033819	N/A	N/A	N/A	N/A
KOfam	UHGV-1997333_17	K14059	156.6	0	int; integrase	N/A
PHROG	UHGV-1997333_17	phrog_1	154.9	0	integrase	integration and excision
UniRef90	UHGV-1997333_17	UniRef90_A0A3R6B6C8	451.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-1997333_17	537007.BLAHAN_05530	306.0	0	N/A	N/A
Pfam	UHGV-1997333_17	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1997333_17	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1997333_17	PF00589,PF02920,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1997333_18	UniRef90_A0A173RE24	75.5	2.12e-16	Bacterial regulatory proteins, luxR family	N/A
Pfam	UHGV-1997333_18	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
structural_annotation	UHGV-1997333_18	PF00196,MF_00245,NF001067,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-1997333_20	phrog_1578	47.6	0.00000000000013	N/A	unknown function
eggNOG-mapper	UHGV-1997333_20	867696.E1XTF6_BPSAV	48.9	0.00000163	N/A	N/A
KOfam	UHGV-1997333_21	K02315	154.7	1.4013e-45	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1997333_21	phrog_50	154.2	1.4013e-45	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1997333_21	UniRef90_UPI00189B8515	192.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1997333_21	1304880.JAGB01000002_gene2233	189.0	0	PFAM IstB-like ATP binding protein	N/A
Pfam	UHGV-1997333_21	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-1997333_21	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1997333_21	PF01695,MF_01919,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-1997333_23	phrog_20593	49.2	0.000000000000056	N/A	unknown function
PHROG	UHGV-1997333_24	phrog_10714	42.6	0.0000000000089	N/A	unknown function
eggNOG-mapper	UHGV-1997333_24	397290.C810_01514	82.4	6.88e-19	N/A	N/A
PHROG	UHGV-1997333_25	phrog_874	184.0	0	N/A	unknown function
UniRef90	UHGV-1997333_25	UniRef90_UPI0018F57B3A	233.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1997333_25	411468.CLOSCI_00298	186.0	0	N/A	N/A
structural_annotation	UHGV-1997333_25	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-1997333_28	phrog_8684	80.9	3.3e-24	N/A	unknown function
UniRef90	UHGV-1997333_28	UniRef90_UPI00156EBF78	152.0	4.2039e-45	YopX family protein	N/A
eggNOG-mapper	UHGV-1997333_28	742735.HMPREF9467_00920	84.3	5.17e-19	YopX protein	N/A
Pfam	UHGV-1997333_28	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1997333_28	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1997333_28	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1997333_30	phrog_19658	107.8	7.4e-32	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1997333_30	UniRef90_UPI001E517B3D	132.0	6.13e-33	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1997333_30	1121947.AUHK01000002_gene919	142.0	1.19e-37	DnaD domain protein	N/A
COG	UHGV-1997333_30	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1997333_30	PF20024,MF_01819,NF040642,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-1997333_33	phrog_2245	83.6	2.3e-24	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-1997333_33	UniRef90_A0A373NRP8	117.0	2.73e-32	MazG domain-containing protein	N/A
eggNOG-mapper	UHGV-1997333_33	326426.Bbr_0313	77.0	4.32e-16	N/A	N/A
Pfam	UHGV-1997333_33	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
structural_annotation	UHGV-1997333_33	PF12643,MF_01020,TIGR03188,COG0140	N/A	N/A	N/A	N/A
PHROG	UHGV-1997333_34	phrog_17690	113.3	1.2e-33	N/A	unknown function
UniRef90	UHGV-1997333_34	UniRef90_A0A6L5XWF4	119.0	5.04e-32	3-dehydroquinate synthase	N/A
eggNOG-mapper	UHGV-1997333_34	33035.JPJF01000123_gene2433	111.0	9.65e-30	N/A	N/A
KOfam	UHGV-1997333_36	K00558	41.1	0.000000000015	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1997333_36	phrog_16427	84.1	2e-24	DNA methyltransferase	other
UniRef90	UHGV-1997333_36	UniRef90_A0A412KFA2	255.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1997333_36	411490.ANACAC_02374	115.0	3.04e-27	N/A	N/A
PADLOC	UHGV-1997333_36	MTase_II_00174	52.2	0.000000000000011	Type II methyltransferase	RM
Pfam	UHGV-1997333_36	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1997333_36	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-1997333_38	K00558	73.5	1.9e-21	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1997333_38	phrog_116	75.1	7.3e-22	DNA methyltransferase	other
UniRef90	UHGV-1997333_38	UniRef90_A0A8D9UIR1	304.0	0	Cytosine specific methyltransferase	N/A
eggNOG-mapper	UHGV-1997333_38	397290.C810_05213	172.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1997333_38	MTase_II_00174	92.9	7.5e-27	Type II methyltransferase	RM
Pfam	UHGV-1997333_38	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1997333_38	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1997333_38	PF00145	N/A	N/A	N/A	N/A
UniRef90	UHGV-1997333_39	UniRef90_A0A413UEY2	73.6	0.00000000000000515	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1997333_39	397290.C810_05213	86.7	5.85e-19	C-5 cytosine-specific DNA methylase	N/A
COG	UHGV-1997333_39	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-1997333_40	K00571	127.1	1.8e-37	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1997333_40	phrog_23224	151.0	2.8026e-45	DNA methyltransferase	other
UniRef90	UHGV-1997333_40	UniRef90_A0A3R6JG61	453.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1997333_40	981335.G4W934_9CAUD	220.0	0	N-methyltransferase activity	N/A
PADLOC	UHGV-1997333_40	MTase_II_00172	123.7	1.8e-36	Type II methyltransferase	RM
Pfam	UHGV-1997333_40	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
structural_annotation	UHGV-1997333_40	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-1997333_42	K05925	42.1	0.00000000000098	METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]	N/A
PHROG	UHGV-1997333_42	phrog_359	140.1	9.99967e-42	DNA methyltransferase	other
UniRef90	UHGV-1997333_42	UniRef90_R7BGS7	398.0	0	MT-A70	N/A
eggNOG-mapper	UHGV-1997333_42	887325.HMPREF0381_0367	254.0	0	MT-A70	N/A
PADLOC	UHGV-1997333_42	MTase_II_00048	110.2	3.2e-32	Type II methyltransferase	RM
Pfam	UHGV-1997333_42	PF05063	N/A	N/A	MT-A70	MT-A70
COG	UHGV-1997333_42	COG4725	N/A	N/A	N6-adenosine-specific RNA methylase IME4	N/A
structural_annotation	UHGV-1997333_42	PF05063,MF_01872,NF010253,COG4725	N/A	N/A	N/A	N/A
PHROG	UHGV-1997333_43	phrog_19106	275.2	0	N/A	unknown function
UniRef90	UHGV-1997333_43	UniRef90_A0A412RQV5	303.0	0	GIY-YIG nuclease family protein	N/A
eggNOG-mapper	UHGV-1997333_43	658655.HMPREF0988_00875	219.0	0	N/A	N/A
structural_annotation	UHGV-1997333_43	TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-1997333_45	phrog_424	104.6	1.1e-30	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1997333_45	UniRef90_A0A3D5WJX6	461.0	0	Phosphoadenosine phosphosulfate reductase	N/A
eggNOG-mapper	UHGV-1997333_45	1410650.JHWL01000037_gene617	273.0	0	sulfate reduction	N/A
COG	UHGV-1997333_45	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1997333_45	PF01507,MF_00063,NF002537,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-1997333_46	K03111	132.8	3.9e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1997333_46	phrog_44	125.5	4.3e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1997333_46	UniRef90_A0A373Z0M6	236.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1997333_46	411489.CLOL250_00507	194.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1997333_46	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1997333_46	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1997333_46	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1997333_46	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1997333_46	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
Pfam	UHGV-1997333_47	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-1997333_47	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1997333_48	phrog_7839	66.7	3.4e-19	N/A	unknown function
UniRef90	UHGV-1997333_48	UniRef90_A0A413HUB9	94.0	8.29e-22	N/A	N/A
eggNOG-mapper	UHGV-1997333_48	1410650.JHWL01000003_gene2844	75.1	0.00000000000000146	N/A	N/A
PHROG	UHGV-1997333_50	phrog_392	185.8	0	metal-dependent hydrolase	other
UniRef90	UHGV-1997333_50	UniRef90_A0A412RQX2	348.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-1997333_50	1443122.Z958_05735	166.0	0	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-1997333_50	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
dbAPIS	UHGV-1997333_50	APIS058	N/A	N/A	N/A	N/A
COG	UHGV-1997333_50	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-1997333_50	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-1997333_51	phrog_1891	67.9	6.1e-25	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1997333_51	UniRef90_UPI001D013072	122.0	1.04e-30	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1997333_51	1298920.KI911353_gene4861	68.6	0.0000000000199	HNH endonuclease	N/A
Pfam	UHGV-1997333_51	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1997333_51	PF13392	N/A	N/A	N/A	N/A
PHROG	UHGV-1997333_52	phrog_2044	40.1	0.000000000053	RNA polymerase beta subunit	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1997333_52	1304866.K413DRAFT_4695	72.8	4.71e-16	N/A	N/A
structural_annotation	UHGV-1997333_52	NF010673	N/A	N/A	N/A	N/A
PHROG	UHGV-1997333_53	phrog_25456	81.9	6e-24	N/A	unknown function
KOfam	UHGV-1997333_54	K06940	52.3	0.000000000000011	N/A	N/A
PHROG	UHGV-1997333_54	phrog_32498	160.5	0	N/A	unknown function
UniRef90	UHGV-1997333_54	UniRef90_A0A173SAY4	151.0	5.60519e-45	Flagellin N-methylase	N/A
eggNOG-mapper	UHGV-1997333_54	397290.C810_01479	141.0	9.90998e-42	Putative zinc- or iron-chelating domain	N/A
Pfam	UHGV-1997333_54	PF03692	N/A	N/A	Putative zinc- or iron-chelating domain	CxxCxxCC
PHROG	UHGV-1997333_55	phrog_2185	297.1	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1997333_55	UniRef90_UPI001BC46C39	486.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-1997333_55	658655.HMPREF0988_00886	376.0	0	N/A	N/A
structural_annotation	UHGV-1997333_55	NF007351,COG3723	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1997333_57	PF18129,MF_00613,NF002745,COG2139	N/A	N/A	N/A	N/A
KOfam	UHGV-1997333_58	K03546	52.2	3.9e-16	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-1997333_58	phrog_77	111.7	6.1e-33	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1997333_58	UniRef90_A0A412RQV0	377.0	0	AAA_23 domain-containing protein	N/A
eggNOG-mapper	UHGV-1997333_58	397290.C810_01461	364.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1997333_58	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1997333_58	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
PHROG	UHGV-1997333_61	phrog_4292	60.6	1.7e-17	N/A	unknown function
eggNOG-mapper	UHGV-1997333_61	411460.RUMTOR_01375	49.7	0.000000183	N/A	N/A
PHROG	UHGV-1997333_62	phrog_27197	81.3	8.5e-24	N/A	unknown function
eggNOG-mapper	UHGV-1997333_62	665950.HMPREF1025_01373	84.0	7.06e-18	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1997333_62	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1997333	Yes	29,866	39	51	1
UHGV-0072119	No	29,843	39	51	1
UHGV-1671414	No	18,379	40	32	1
UHGV-1591972	No	11,619	38	20	1
UHGV-1578359	No	11,590	39	20	1