vOTU vOTU-026692

vOTU: vOTU-026692

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-026692
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00005 → vOTU-026692
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp000765235
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2128337
Biosample ID	SAMEA3449311
Genome length (bp)	33,621 bps
CheckV completeness	79.26% (Medium-quality)
CDS count	50
CDS density	92.51%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp000765235	Total connections	270	Host agreement	73.7
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp000765235	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 79.26)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-2128337_1	UniRef90_UPI001F3A29DB	540.0	0	plasmid recombination protein	N/A
eggNOG-mapper	UHGV-2128337_1	500632.CLONEX_02768	281.0	0	N/A	N/A
Pfam	UHGV-2128337_1	PF01076	N/A	N/A	Plasmid recombination enzyme	Mob_Pre
NCBIFam	UHGV-2128337_1	NF041497.1	N/A	N/A	MobV family relaxase	N/A
COG	UHGV-2128337_1	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-2128337_1	PF01076,NF041497,COG3843	N/A	N/A	N/A	N/A
KOfam	UHGV-2128337_2	K07505	72.8	6.1e-21	repA; regulatory protein RepA	N/A
PHROG	UHGV-2128337_2	phrog_906	75.0	8.3e-22	DNA polymerase/primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2128337_2	UniRef90_UPI001C104F32	672.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-2128337_2	411473.RUMCAL_02655	319.0	0	AAA domain	N/A
Pfam	UHGV-2128337_2	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-2128337_2	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-2128337_2	PF03796,MF_01498,NF006443,TIGR02719,COG3598	N/A	N/A	N/A	N/A
UniRef90	UHGV-2128337_3	UniRef90_R5RXT1	129.0	5.64e-38	HTH_17 domain-containing protein	N/A
eggNOG-mapper	UHGV-2128337_3	693746.OBV_30680	73.9	9.02e-17	Helix-turn-helix domain	N/A
Pfam	UHGV-2128337_3	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
COG	UHGV-2128337_3	COG3311	N/A	N/A	DNA-binding transcriptional regulator AlpA	N/A
UniRef90	UHGV-2128337_4	UniRef90_UPI001C0F780F	174.0	0	N/A	N/A
eggNOG-mapper	UHGV-2128337_4	203119.Cthe_3235	123.0	7.54e-30	N/A	N/A
Pfam	UHGV-2128337_4	PF19553	N/A	N/A	N/A	DUF6076
KOfam	UHGV-2128337_5	K14059	318.1	0	int; integrase	N/A
PHROG	UHGV-2128337_5	phrog_1	211.1	0	integrase	integration and excision
UniRef90	UHGV-2128337_5	UniRef90_A0A416Z9M6	771.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-2128337_5	877414.ATWA01000018_gene2094	466.0	0	Phage integrase family	N/A
Pfam	UHGV-2128337_5	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-2128337_5	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2128337_5	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2128337_5	PF00589,PF02920,PF14659,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2128337_6	1232443.BAIA02000078_gene6	57.8	0.00000000325	N/A	N/A
PHROG	UHGV-2128337_7	phrog_28802	43.4	0.0000000000013	N/A	unknown function
eggNOG-mapper	UHGV-2128337_7	476272.RUMHYD_01772	59.3	0.00000000512	N/A	N/A
PHROG	UHGV-2128337_8	phrog_20016	170.9	0	N/A	unknown function
UniRef90	UHGV-2128337_8	UniRef90_A0A285PT46	186.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-2128337_8	397290.C810_05214	154.0	0	N/A	N/A
structural_annotation	UHGV-2128337_8	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-2128337_10	phrog_16490	130.2	3.1e-39	N/A	unknown function
eggNOG-mapper	UHGV-2128337_10	658655.HMPREF0988_00917	139.0	1.09e-37	N/A	N/A
PHROG	UHGV-2128337_11	phrog_22984	64.5	1.3e-18	N/A	unknown function
PHROG	UHGV-2128337_12	phrog_21718	107.5	1.1e-31	N/A	unknown function
eggNOG-mapper	UHGV-2128337_12	397290.C810_05210	72.8	0.0000000000000524	N/A	N/A
PHROG	UHGV-2128337_13	phrog_3754	114.2	9.3e-34	N/A	unknown function
eggNOG-mapper	UHGV-2128337_13	1226322.HMPREF1545_00073	167.0	0	N/A	N/A
UniRef90	UHGV-2128337_15	UniRef90_A0A8D9PDQ3	71.2	0.000000000000011	ECF sigma factor	N/A
structural_annotation	UHGV-2128337_15	PF08281,MF_00674,NF041727,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-2128337_16	phrog_21357	116.2	2.3e-34	endolysin	lysis
UniRef90	UHGV-2128337_16	UniRef90_R5SN87	253.0	0	Peptidase C51 domain-containing protein	N/A
eggNOG-mapper	UHGV-2128337_16	1007096.BAGW01000022_gene2648	153.0	5.32493e-44	CHAP domain	N/A
Pfam	UHGV-2128337_16	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-2128337_16	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-2128337_16	TIGR02594	N/A	N/A	N/A	N/A
PHROG	UHGV-2128337_17	phrog_13256	64.0	1.4e-18	N/A	unknown function
eggNOG-mapper	UHGV-2128337_17	1226322.HMPREF1545_00132	74.3	9.25e-17	N/A	N/A
PHROG	UHGV-2128337_19	phrog_937	42.6	0.000000000011	hemolysin	other
eggNOG-mapper	UHGV-2128337_19	1519439.JPJG01000023_gene533	67.8	0.000000000000177	N/A	N/A
PHROG	UHGV-2128337_20	phrog_27545	159.5	0	N/A	unknown function
UniRef90	UHGV-2128337_20	UniRef90_A0A2V2GQB6	161.0	0	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-2128337_20	1519439.JPJG01000060_gene1895	364.0	0	N/A	N/A
Pfam	UHGV-2128337_20	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-2128337_20	PF16170	N/A	N/A	N/A	N/A
PHROG	UHGV-2128337_21	phrog_10993	260.5	0	Hoc-like head decoration	head and packaging
UniRef90	UHGV-2128337_21	UniRef90_A0A3D4D8F0	337.0	0	N/A	N/A
eggNOG-mapper	UHGV-2128337_21	1519439.JPJG01000060_gene1894	306.0	0	N/A	N/A
Pfam	UHGV-2128337_21	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-2128337_21	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-2128337_21	PF19789,PF18707,NF041825,COG3330	N/A	N/A	N/A	N/A
PHROG	UHGV-2128337_22	phrog_21962	61.9	1.3e-19	tail protein	tail
UniRef90	UHGV-2128337_22	UniRef90_A0A858MRS5	79.0	0.00000000000352	Putative tail fiber protein	N/A
eggNOG-mapper	UHGV-2128337_22	1519439.JPJG01000060_gene1892	283.0	0	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-2128337_22	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
PHROG	UHGV-2128337_24	phrog_7121	70.6	4.8e-21	tail fiber protein	tail
UniRef90	UHGV-2128337_24	UniRef90_R9LW25	233.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-2128337_24	1235797.C816_04179	233.0	0	Chaperone of endosialidase	N/A
Pfam	UHGV-2128337_24	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-2128337_24	PF07902,NF041249	N/A	N/A	N/A	N/A
PHROG	UHGV-2128337_25	phrog_32308	45.1	0.00000000000028	N/A	unknown function
UniRef90	UHGV-2128337_25	UniRef90_A0A2Z4QA17	263.0	0	KID repeat-containing protein	N/A
eggNOG-mapper	UHGV-2128337_25	1235797.C816_04180	300.0	0	N/A	N/A
structural_annotation	UHGV-2128337_25	PF21683,TIGR02126,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-2128337_26	phrog_1194	75.5	6e-22	N/A	unknown function
eggNOG-mapper	UHGV-2128337_26	1232443.BAIA02000078_gene17	128.0	7.14e-37	N/A	N/A
Pfam	UHGV-2128337_26	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-2128337_26	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2128337_27	phrog_1535	84.5	1.1e-33	tail length tape measure protein	tail
UniRef90	UHGV-2128337_27	UniRef90_A0A810PX76	130.0	6.67e-28	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-2128337_27	693746.OBV_18190	251.0	0	domain protein	N/A
COG	UHGV-2128337_27	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2128337_27	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-2128337_28	phrog_17658	60.5	2.7e-17	N/A	unknown function
UniRef90	UHGV-2128337_28	UniRef90_A0A316PG91	83.6	7.92e-16	zinc_ribbon_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-2128337_28	768710.DesyoDRAFT_1122	81.6	2.51e-16	N/A	N/A
structural_annotation	UHGV-2128337_28	PF18116,COG3402	N/A	N/A	N/A	N/A
PHROG	UHGV-2128337_29	phrog_706	112.0	4.6e-33	N/A	unknown function
UniRef90	UHGV-2128337_29	UniRef90_UPI001D069FB9	243.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-2128337_29	693746.OBV_18170	177.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-2128337_29	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-2128337_29	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2128337_30	phrog_11299	75.6	7.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-2128337_30	693746.OBV_18160	180.0	0	N/A	N/A
structural_annotation	UHGV-2128337_30	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-2128337_31	phrog_3099	94.9	9e-28	N/A	unknown function
eggNOG-mapper	UHGV-2128337_31	1232443.BAIA02000078_gene23	238.0	0	N/A	N/A
structural_annotation	UHGV-2128337_31	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-2128337_32	phrog_3266	58.9	8.2e-17	tail completion	connector
eggNOG-mapper	UHGV-2128337_32	1232443.BAIA02000078_gene24	187.0	0	N/A	N/A
structural_annotation	UHGV-2128337_32	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-2128337_33	phrog_556	73.3	2.6e-21	minor head protein	head and packaging
UniRef90	UHGV-2128337_33	UniRef90_UPI00195E1497	188.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-2128337_33	1226322.HMPREF1545_00054	150.0	5.60519e-45	Minor capsid protein	N/A
Pfam	UHGV-2128337_33	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-2128337_33	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-2128337_34	phrog_3366	88.9	5.1e-26	N/A	unknown function
eggNOG-mapper	UHGV-2128337_34	1226322.HMPREF1545_00053	141.0	4.16998e-41	N/A	N/A
structural_annotation	UHGV-2128337_34	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-2128337_35	phrog_541	111.7	3.9e-33	head-tail adaptor	connector
eggNOG-mapper	UHGV-2128337_35	642492.Clole_0822	70.1	0.000000000000182	N/A	N/A
PHROG	UHGV-2128337_36	phrog_10	174.5	0	major head protein	head and packaging
UniRef90	UHGV-2128337_36	UniRef90_A0A2U1BEF2	537.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-2128337_36	1226322.HMPREF1545_00050	473.0	0	Phage capsid family	N/A
Pfam	UHGV-2128337_36	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-2128337_36	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-2128337_36	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-2128337_36	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2128337_37	phrog_2303	54.1	0.0000000000000022	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-2128337_37	1226322.HMPREF1545_00049	150.0	4.06377e-44	N/A	N/A
PHROG	UHGV-2128337_38	phrog_581	278.2	0	minor head protein	head and packaging
UniRef90	UHGV-2128337_38	UniRef90_UPI001D080D49	531.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-2128337_38	1226322.HMPREF1545_00046	349.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-2128337_38	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-2128337_38	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2128337_38	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-2128337_39	phrog_8680	230.5	0	N/A	unknown function
UniRef90	UHGV-2128337_39	UniRef90_A0A3R6D7I3	260.0	0	N/A	N/A
eggNOG-mapper	UHGV-2128337_39	411470.RUMGNA_02208	240.0	0	N/A	N/A
Pfam	UHGV-2128337_39	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-2128337_39	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-2128337_41	phrog_533	366.0	0	portal protein	head and packaging
UniRef90	UHGV-2128337_41	UniRef90_UPI0006C81717	703.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-2128337_41	1226322.HMPREF1545_00044	607.0	0	N/A	N/A
Pfam	UHGV-2128337_41	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-2128337_41	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-2128337_42	K06909	383.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2128337_42	phrog_3717	162.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-2128337_42	UniRef90_A0A2U1BEH4	718.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-2128337_42	33035.JPJF01000106_gene3136	463.0	0	Terminase small subunit	N/A
Pfam	UHGV-2128337_42	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-2128337_42	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-2128337_42	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2128337_42	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2128337_42	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-2128337_43	K07474	112.1	8.7e-33	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-2128337_43	phrog_51	103.3	1.9e-30	terminase small subunit	head and packaging
UniRef90	UHGV-2128337_43	UniRef90_UPI001D05F697	165.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-2128337_43	697281.Mahau_0566	84.0	1.1e-18	Terminase Small Subunit	N/A
Pfam	UHGV-2128337_43	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-2128337_43	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-2128337_43	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-2128337_44	K22300	45.2	0.0000000000018	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2128337_44	phrog_8	69.1	8.9e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-2128337_44	UniRef90_A0A8D9PDC4	105.0	3.66e-28	Repressor protein	N/A
eggNOG-mapper	UHGV-2128337_44	1226322.HMPREF1545_00039	77.0	7.99e-18	sequence-specific DNA binding	N/A
Pfam	UHGV-2128337_44	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2128337_44	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2128337_44	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-2128337_45	phrog_236	97.0	3.4e-28	nucleotide kinase	other
UniRef90	UHGV-2128337_45	UniRef90_UPI001CA83796	99.4	2.02e-25	N/A	N/A
eggNOG-mapper	UHGV-2128337_45	1033743.CAES01000020_gene3148	90.1	2.24e-22	N/A	N/A
Pfam	UHGV-2128337_45	PF11753	N/A	N/A	N/A	DUF3310
eggNOG-mapper	UHGV-2128337_47	552398.HMPREF0866_03131	49.3	0.000000399	N/A	N/A
UniRef90	UHGV-2128337_49	UniRef90_F4XGQ3	304.0	0	N/A	N/A
eggNOG-mapper	UHGV-2128337_49	552398.HMPREF0866_02803	304.0	0	YodL-like	N/A
Pfam	UHGV-2128337_49	PF14191	N/A	N/A	YodL-like	YodL
Pfam	UHGV-2128337_49	PF14195	N/A	N/A	N/A	DUF4316
COG	UHGV-2128337_49	COG4227	N/A	N/A	Antirestriction protein ArdC	N/A
eggNOG-mapper	UHGV-2128337_50	1123263.AUKY01000003_gene292	65.5	0.00000000000577	Involved in chromosome partitioning	N/A
COG	UHGV-2128337_50	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2128337	Yes	33,621	53	79	1
UHGV-0086634	No	21,509	52	51	1
UHGV-1748020	No	20,571	52	48	1
UHGV-1809858	No	16,017	51	38	1