vOTU vOTU-026728

vOTU: vOTU-026728

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-026728
Number of genomes	5
Taxonomy (ICTV)	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Lactococcus → Lactococcus petauri
Taxonomy (UHGV)	vFAM-00011 → vSUBFAM-01216 → vOTU-026728
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Lactococcus → Lactococcus petauri
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0075808
Biosample ID	SAMEA2580162
Genome length (bp)	22,170 bps
CheckV completeness	57.19% (Medium-quality)
CDS count	39
CDS density	90.03%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Lactococcus → Lactococcus petauri	Total connections	12	Host agreement	75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 57.19)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0075808_1	phrog_19315	91.5	1e-26	N/A	unknown function
UniRef90	UHGV-0075808_1	UniRef90_UPI0018A895C9	411.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0075808_1	1329250.WOSG25_021900	84.0	3.15e-16	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0075808_1	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0075808_1	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
PHROG	UHGV-0075808_2	phrog_8	75.2	1.3e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-0075808_2	UniRef90_UPI001E44307D	225.0	0	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0075808_2	202752.JL53_03615	88.6	2.49e-21	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0075808_2	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0075808_2	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0075808_2	PF12844,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0075808_3	UniRef90_A0A7X2KVZ7	116.0	4.54e-33	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0075808_3	1000588.HMPREF9965_1728	48.5	0.000000743	N/A	N/A
structural_annotation	UHGV-0075808_3	PF21291,TIGR04111,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0075808_4	K07741	126.8	4.3e-37	antB; anti-repressor protein	N/A
PHROG	UHGV-0075808_4	phrog_130	258.3	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0075808_4	UniRef90_UPI0018AB6AC9	494.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0075808_4	257314.LJ_1455	281.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0075808_4	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0075808_4	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0075808_4	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0075808_4	PF03374,PF02498,TIGR02681,COG3645	N/A	N/A	N/A	N/A
UniRef90	UHGV-0075808_5	UniRef90_A0A166U0Q9	70.1	0.000000000000112	N/A	N/A
eggNOG-mapper	UHGV-0075808_5	1229517.AMFD01000025_gene926	189.0	0	N/A	N/A
PHROG	UHGV-0075808_11	phrog_1305	143.5	1.19951e-42	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0075808_11	UniRef90_UPI0018A909CA	460.0	0	N/A	N/A
eggNOG-mapper	UHGV-0075808_11	861455.HMPREF9184_01014	147.0	2.89004e-41	N/A	N/A
Pfam	UHGV-0075808_11	PF13643	N/A	N/A	N/A	DUF4145
structural_annotation	UHGV-0075808_11	COG2250	N/A	N/A	N/A	N/A
KOfam	UHGV-0075808_12	K04763	163.8	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0075808_12	phrog_1	133.3	2.6e-39	integrase	integration and excision
UniRef90	UHGV-0075808_12	UniRef90_A0A6L2ZXQ2	519.0	0	Recombinase XerC	N/A
eggNOG-mapper	UHGV-0075808_12	1231377.C426_1701	398.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0075808_12	PF02899	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_1
Pfam	UHGV-0075808_12	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0075808_12	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0075808_12	PF00589,PF13495,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0075808_13	phrog_270	139.5	3.00004e-41	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0075808_13	UniRef90_A0A7T4THH4	456.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0075808_13	1215915.BN193_09195	137.0	4.98e-37	Helix-turn-helix domain	N/A
Pfam	UHGV-0075808_13	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0075808_13	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0075808_13	PF13730,MF_01909,NF040939,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-0075808_14	phrog_2108	59.9	3.1e-17	N/A	unknown function
KOfam	UHGV-0075808_15	K02315	158.0	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0075808_15	phrog_50	153.2	1.4013e-45	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0075808_15	UniRef90_UPI0018A9E098	574.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0075808_15	1231377.C426_1704	488.0	0	Primosomal protein DnaI N-terminus	N/A
Pfam	UHGV-0075808_15	PF07319	N/A	N/A	Primosomal protein DnaI N-terminus	DnaI_N
Pfam	UHGV-0075808_15	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0075808_15	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0075808_15	PF01695,MF_00377,NF006505,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0075808_16	phrog_3109	73.3	2.9e-21	N/A	unknown function
UniRef90	UHGV-0075808_16	UniRef90_UPI0013FD28A5	94.0	1.18e-23	N/A	N/A
Pfam	UHGV-0075808_16	PF06275	N/A	N/A	N/A	DUF1031
PHROG	UHGV-0075808_17	phrog_16590	44.0	0.0000000000042	N/A	unknown function
PHROG	UHGV-0075808_18	phrog_16590	40.0	0.000000000071	N/A	unknown function
PHROG	UHGV-0075808_19	phrog_16590	150.8	2.8026e-45	N/A	unknown function
UniRef90	UHGV-0075808_19	UniRef90_UPI001BCDAD72	188.0	0	N/A	N/A
KOfam	UHGV-0075808_20	K01520	107.3	1.9e-31	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0075808_20	phrog_135	129.2	2.5e-38	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0075808_20	UniRef90_K2PTY6	266.0	0	Deoxyuridine 5'-triphosphate nucleotidohydrolase	N/A
eggNOG-mapper	UHGV-0075808_20	1231377.C426_1708	266.0	0	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	N/A
Pfam	UHGV-0075808_20	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0075808_20	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0075808_20	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0075808_20	PF00692,MF_00116,NF010561,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-0075808_21	phrog_27120	139.3	7.19987e-42	N/A	unknown function
PHROG	UHGV-0075808_22	phrog_803	59.8	5.7e-17	host nuclease inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0075808_22	UniRef90_S6FHZ7	86.7	2.15e-21	N/A	N/A
eggNOG-mapper	UHGV-0075808_22	1229517.AMFD01000018_gene199	112.0	1.39e-32	N/A	N/A
PHROG	UHGV-0075808_23	phrog_12855	143.0	1.80067e-42	membrane protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0075808_23	UniRef90_A0A7T4NJI3	253.0	0	N/A	N/A
eggNOG-mapper	UHGV-0075808_23	1123303.AQVD01000001_gene517	65.9	0.0000000000209	N/A	N/A
Pfam	UHGV-0075808_23	PF05656	N/A	N/A	N/A	DUF805
COG	UHGV-0075808_23	COG3152	N/A	N/A	N/A	N/A
PHROG	UHGV-0075808_24	phrog_2198	160.0	0	Alt-like transcription activator	transcription regulation
UniRef90	UHGV-0075808_24	UniRef90_UPI001CE2B3B0	266.0	0	RinA family protein	N/A
eggNOG-mapper	UHGV-0075808_24	1229517.AMFD01000023_gene1326	180.0	0	EVIDENCE BY HOMOLOGY BIO14.03 Phage related functions and prophages	N/A
Pfam	UHGV-0075808_24	PF05263	N/A	N/A	N/A	DUF722
structural_annotation	UHGV-0075808_24	PF05263,MF_00674,TIGR01636,COG1595	N/A	N/A	N/A	N/A
UniRef90	UHGV-0075808_25	UniRef90_R8H0W8	85.1	8.29e-20	N/A	N/A
eggNOG-mapper	UHGV-0075808_25	1145276.T479_01600	57.8	0.000000000974	N/A	N/A
KOfam	UHGV-0075808_26	K07451	44.6	0.0000000000027	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0075808_26	phrog_144	93.8	1.8e-27	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0075808_26	UniRef90_A0A6L2ZWV0	262.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0075808_26	1158604.I591_00523	188.0	0	HNH endonuclease	N/A
Pfam	UHGV-0075808_26	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0075808_26	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0075808_26	PF05766	N/A	N/A	N/A	N/A
PHROG	UHGV-0075808_27	phrog_361	137.2	5.99994e-41	terminase small subunit	head and packaging
UniRef90	UHGV-0075808_27	UniRef90_A0A6L2ZW22	276.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0075808_27	565664.EFXG_02663	115.0	3.94e-31	N/A	N/A
Pfam	UHGV-0075808_27	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
PHROG	UHGV-0075808_28	phrog_9	379.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0075808_28	UniRef90_A0A6L2ZXS3	1138.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0075808_28	565664.EFXG_02662	778.0	0	Phage Terminase	N/A
Pfam	UHGV-0075808_28	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0075808_28	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0075808_28	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0075808_28	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0075808_29	phrog_12	114.9	6.2e-34	portal protein	head and packaging
UniRef90	UHGV-0075808_29	UniRef90_A0A6L2ZX88	783.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0075808_29	565664.EFXG_02661	526.0	0	Phage portal protein	N/A
Pfam	UHGV-0075808_29	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0075808_29	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0075808_29	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0075808_30	K06904	172.7	0	N/A	N/A
PHROG	UHGV-0075808_30	phrog_80	202.6	0	head maturation protease	head and packaging
UniRef90	UHGV-0075808_30	UniRef90_A0A7T4NLV0	371.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0075808_30	1201292.DR75_1639	230.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0075808_30	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0075808_30	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0075808_30	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0075808_30	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0075808_31	phrog_10	184.8	0	major head protein	head and packaging
UniRef90	UHGV-0075808_31	UniRef90_A0A6L2ZW17	720.0	0	Primosomal replication protein N	N/A
eggNOG-mapper	UHGV-0075808_31	1201292.DR75_1638	515.0	0	Phage capsid family	N/A
Pfam	UHGV-0075808_31	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0075808_31	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0075808_31	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0075808_31	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0075808_32	phrog_4609	140.7	2.59941e-42	N/A	unknown function
UniRef90	UHGV-0075808_32	UniRef90_A0A7T4NL49	172.0	0	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0075808_32	1158604.I591_00530	105.0	1.48e-28	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0075808_32	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0075808_32	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
PHROG	UHGV-0075808_33	phrog_4014	142.7	1.3999e-42	head-tail adaptor	connector
UniRef90	UHGV-0075808_33	UniRef90_A0A6L2ZX87	204.0	0	Phage head closure protein	N/A
eggNOG-mapper	UHGV-0075808_33	1158604.I591_00531	142.0	1.02995e-42	Phage head-tail joining protein	N/A
NCBIFam	UHGV-0075808_33	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0075808_33	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0075808_34	UniRef90_A0A0M2A8L3	124.0	8.16e-35	N/A	N/A
eggNOG-mapper	UHGV-0075808_34	226185.EF_2817	134.0	2.15e-39	N/A	N/A
structural_annotation	UHGV-0075808_34	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0075808_35	phrog_5	63.5	5.4e-18	tail completion or Neck1 protein	connector
UniRef90	UHGV-0075808_35	UniRef90_A0A7T4NLV5	226.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0075808_35	565664.EFXG_02655	152.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0075808_35	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0075808_35	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0075808_35	TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0075808_36	phrog_11502	162.3	0	tail protein	tail
UniRef90	UHGV-0075808_36	UniRef90_A0A6L2ZWW1	417.0	0	Tail protein	N/A
eggNOG-mapper	UHGV-0075808_36	226185.EF_2815	324.0	0	N/A	N/A
NCBIFam	UHGV-0075808_36	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0075808_36	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0075808_37	phrog_4888	176.0	0	tail assembly chaperone	tail
UniRef90	UHGV-0075808_37	UniRef90_W7D9N8	100.0	1.84e-24	N/A	N/A
eggNOG-mapper	UHGV-0075808_37	1158604.I591_00535	207.0	0	N/A	N/A
structural_annotation	UHGV-0075808_37	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0075808_38	phrog_991	209.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0075808_38	UniRef90_A0A6L2ZXA0	1384.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0075808_38	1158614.I592_02326	948.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0075808_38	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0075808_38	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0075808_38	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0075808_38	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
UniRef90	UHGV-0075808_39	UniRef90_UPI001BAFEAD6	204.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0075808_39	1158604.I591_00537	157.0	0	phage tail	N/A
COG	UHGV-0075808_39	COG4722	N/A	N/A	Phage-related protein YomH	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0075808	Yes	22,170	34	57	1
UHGV-0188269	No	17,407	36	44	1
UHGV-0226060	No	17,407	36	44	1
UHGV-1761364	No	17,407	36	44	1
UHGV-2004749	No	12,346	36	32	1