vOTU vOTU-026852

vOTU: vOTU-026852

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-026852
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00040 → vGENUS-00013 → vOTU-026852
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter faecis
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1504484
Biosample ID	SAMEA4378255
Genome length (bp)	35,379 bps
CheckV completeness	61.37% (Medium-quality)
CDS count	55
CDS density	83.58%
tRNA count	4
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter faecis	Total connections	1940	Host agreement	76.91
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter faecis	Total connections	12	Host agreement	75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 61.37)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1504484_1	665956.HMPREF1032_02937	61.6	0.0000000667	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-1504484_1	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-1504484_2	phrog_17196	132.1	4.39999e-40	kinase	other
eggNOG-mapper	UHGV-1504484_2	483218.BACPEC_01141	185.0	0	N/A	N/A
structural_annotation	UHGV-1504484_2	PF19537,PF13619,COG3536	N/A	N/A	N/A	N/A
PHROG	UHGV-1504484_3	phrog_18190	486.6	0	N/A	unknown function
UniRef90	UHGV-1504484_3	UniRef90_A0A173UFM3	1239.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1504484_3	397290.C810_05239	300.0	0	N/A	N/A
Pfam	UHGV-1504484_3	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-1504484_3	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1504484_4	phrog_1194	46.6	0.00000000000049	N/A	unknown function
Pfam	UHGV-1504484_4	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1504484_4	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1504484_5	phrog_130	143.6	1.3999e-42	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1504484_5	UniRef90_UPI0009D7969F	233.0	0	transporter	N/A
eggNOG-mapper	UHGV-1504484_5	1443125.Z962_p0009	205.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1504484_5	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-1504484_5	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1504484_5	PF02498,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-1504484_6	phrog_806	67.9	1.2e-19	N/A	unknown function
UniRef90	UHGV-1504484_6	UniRef90_UPI001D08E833	117.0	3.17e-28	N/A	N/A
eggNOG-mapper	UHGV-1504484_6	1235802.C823_04880	106.0	1.66e-25	N/A	N/A
Pfam	UHGV-1504484_6	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-1504484_6	PF11611,PF13828,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-1504484_7	phrog_215	42.3	0.0000000000049	structural protein with Ig domain	head and packaging
UniRef90	UHGV-1504484_7	UniRef90_A0A0K8J2R3	67.0	0.000000000703	BIG2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1504484_7	1280681.AUJZ01000002_gene1435	73.6	0.00000000000145	Bacterial Ig-like domain 2	N/A
Pfam	UHGV-1504484_7	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
structural_annotation	UHGV-1504484_7	PF02368,NF041740	N/A	N/A	N/A	N/A
PHROG	UHGV-1504484_8	phrog_1535	249.6	0	tail length tape measure protein	tail
UniRef90	UHGV-1504484_8	UniRef90_A0A173UHS1	939.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1504484_8	1211844.CBLM010000016_gene1482	212.0	0	tape measure	N/A
COG	UHGV-1504484_8	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1504484_8	PF20155,MF_04138	N/A	N/A	N/A	N/A
PHROG	UHGV-1504484_9	phrog_14030	132.6	2.6e-39	N/A	unknown function
UniRef90	UHGV-1504484_9	UniRef90_A0A3R6ARM6	209.0	0	Peptidoglycan-binding protein	N/A
eggNOG-mapper	UHGV-1504484_9	1235793.C809_02691	172.0	0	N-Acetylmuramoyl-L-alanine amidase	N/A
COG	UHGV-1504484_9	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
UniRef90	UHGV-1504484_12	UniRef90_A0A8D9PGN2	184.0	0	Major tail protein	N/A
structural_annotation	UHGV-1504484_12	PF16463,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1504484_13	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1504484_14	1298920.KI911353_gene2654	176.0	0	N/A	N/A
AcrCatalog	UHGV-1504484_14	cluster_24841	92.0	1.95e-25	NA	N/A
structural_annotation	UHGV-1504484_15	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1504484_16	phrog_443	54.8	0.0000000000000027	holin	lysis
UniRef90	UHGV-1504484_16	UniRef90_UPI000BA3B743	98.6	9.63e-26	holin	N/A
eggNOG-mapper	UHGV-1504484_16	411490.ANACAC_00704	87.8	2.78e-22	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1504484_16	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1504484_16	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-1504484_17	phrog_4105	84.3	1.1e-24	N/A	unknown function
eggNOG-mapper	UHGV-1504484_17	411459.RUMOBE_00911	159.0	0	N/A	N/A
eggNOG-mapper	UHGV-1504484_18	397290.C810_01402	61.2	0.000000000201	N/A	N/A
UniRef90	UHGV-1504484_19	UniRef90_A0A416G2T8	64.3	0.00000000000759	Rho_N domain-containing protein	N/A
structural_annotation	UHGV-1504484_19	PF21169	N/A	N/A	N/A	N/A
PHROG	UHGV-1504484_20	phrog_29	162.3	0	major head protein	head and packaging
UniRef90	UHGV-1504484_20	UniRef90_UPI001D02C54B	692.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-1504484_20	1298920.KI911353_gene2660	343.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1504484_20	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1504484_20	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1504484_21	phrog_909	47.8	0.00000000000023	major head protein	head and packaging
eggNOG-mapper	UHGV-1504484_21	1298920.KI911353_gene2661	122.0	1.88e-34	N/A	N/A
UniRef90	UHGV-1504484_22	UniRef90_R6C0B6	124.0	1.93e-32	Phage capsid scaffolding protein	N/A
PHROG	UHGV-1504484_23	phrog_64	172.0	0	portal protein	head and packaging
UniRef90	UHGV-1504484_23	UniRef90_R7BGE4	771.0	0	SPP1 family phage portal protein	N/A
eggNOG-mapper	UHGV-1504484_23	1298920.KI911353_gene2663	487.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1504484_23	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1504484_23	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1504484_24	phrog_36	66.7	4.2e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-1504484_24	UniRef90_A0A410QFZ6	85.9	1.07e-18	N/A	N/A
eggNOG-mapper	UHGV-1504484_24	994573.T472_0211085	77.4	3.89e-16	sigma factor activity	N/A
COG	UHGV-1504484_24	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1504484_24	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-1504484_25	phrog_38	143.6	1.3004e-42	terminase large subunit	head and packaging
UniRef90	UHGV-1504484_25	UniRef90_A0A8D9PG33	739.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1504484_25	1232453.BAIF02000058_gene1623	422.0	0	TIGRFAM Phage	N/A
COG	UHGV-1504484_25	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1504484_25	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
UniRef90	UHGV-1504484_28	UniRef90_A0A8D9PGN8	67.4	0.000000000000328	Acetyl-coA carboxylase zinc finger domain protein	N/A
eggNOG-mapper	UHGV-1504484_34	411473.RUMCAL_02525	97.4	1e-24	N/A	N/A
PHROG	UHGV-1504484_35	phrog_229	117.4	9.9e-35	MazG-like pyrophosphatase	other
UniRef90	UHGV-1504484_35	UniRef90_UPI001D02B1F9	275.0	0	nucleoside triphosphate pyrophosphohydrolase family protein	N/A
eggNOG-mapper	UHGV-1504484_35	428125.CLOLEP_01391	103.0	7.27e-27	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-1504484_35	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-1504484_35	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1504484_35	PF03819,MF_01020,TIGR03188,COG1694	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1504484_36	658655.HMPREF0988_00895	68.9	0.00000000000403	N/A	N/A
eggNOG-mapper	UHGV-1504484_40	411470.RUMGNA_03786	86.3	4.16e-20	Helix-turn-helix XRE-family like proteins	N/A
COG	UHGV-1504484_40	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-1504484_41	K07727	54.5	0.0000000000000033	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-1504484_41	UniRef90_F7K072	125.0	2.27e-36	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1504484_41	411470.RUMGNA_00075	125.0	3.8e-37	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1504484_41	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1504484_41	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1504484_44	397290.C810_01348	79.3	3.37e-18	N/A	N/A
structural_annotation	UHGV-1504484_45	PF10694,MF_00403_B,NF007348,COG5569	N/A	N/A	N/A	N/A
PHROG	UHGV-1504484_49	phrog_1233	48.3	0.00000000000018	N/A	unknown function
eggNOG-mapper	UHGV-1504484_49	658655.HMPREF0988_00914	103.0	2.29e-27	N/A	N/A
eggNOG-mapper	UHGV-1504484_50	658655.HMPREF0988_00915	105.0	3.72e-25	N/A	N/A
PHROG	UHGV-1504484_51	phrog_20016	221.0	0	N/A	unknown function
UniRef90	UHGV-1504484_51	UniRef90_A0A285PT46	162.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1504484_51	397290.C810_05214	221.0	0	N/A	N/A
structural_annotation	UHGV-1504484_51	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1504484_52	phrog_16490	193.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1504484_52	397290.C810_01328	185.0	0	N/A	N/A
eggNOG-mapper	UHGV-1504484_53	658655.HMPREF0988_00918	82.0	1.02e-19	N/A	N/A
eggNOG-mapper	UHGV-1504484_54	658655.HMPREF0988_00919	90.9	7.25e-21	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1504484	Yes	35,379	41	61	1
UHGV-0116639	No	35,379	41	61	1
UHGV-0128758	No	29,268	41	51	1
UHGV-1722970	No	28,000	41	49	1
UHGV-1831804	No	15,791	41	27	1