vOTU vOTU-027114

vOTU: vOTU-027114

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-027114
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00792 → vOTU-027114
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii_D
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2154688
Biosample ID	N/A
Genome length (bp)	31,268 bps
CheckV completeness	72.54% (Medium-quality)
CDS count	47
CDS density	93.94%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii_C	Total connections	3	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii_D	Total connections	377	Host agreement	93.63

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 72.54)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-2154688_1	748224.HMPREF9436_01441	51.6	0.0000000544	N/A	N/A
COG	UHGV-2154688_1	COG2954	N/A	N/A	CYTH domain, found in class IV adenylate cyclase and various triphosphatases	N/A
KOfam	UHGV-2154688_2	K14059	89.4	6.5e-26	int; integrase	N/A
PHROG	UHGV-2154688_2	phrog_1	127.4	1.4e-37	integrase	integration and excision
UniRef90	UHGV-2154688_2	UniRef90_E2ZIE8	647.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-2154688_2	748224.HMPREF9436_01442	647.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-2154688_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2154688_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2154688_2	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2154688_3	748224.HMPREF9436_01443	600.0	0	vancomycin resistance protein	N/A
COG	UHGV-2154688_3	COG2720	N/A	N/A	Vancomycin resistance protein YoaR (function unknown), contains peptidoglycan-binding and VanW domains	N/A
KOfam	UHGV-2154688_5	K18830	63.8	3e-18	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-2154688_5	phrog_8	49.5	0.000000000000036	transcriptional regulator	transcription regulation
UniRef90	UHGV-2154688_5	UniRef90_E2ZIF0	246.0	0	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-2154688_5	748224.HMPREF9436_01444	246.0	0	N/A	N/A
PADLOC	UHGV-2154688_5	retron_type_VI_hth_cluster2_1	45.5	0.00000000000088	N/A	Retron
Pfam	UHGV-2154688_5	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-2154688_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2154688_5	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-2154688_6	phrog_14088	45.7	0.00000000000062	N/A	unknown function
UniRef90	UHGV-2154688_6	UniRef90_UPI001D07CB3C	50.8	0.000000559	carboxypeptidase	N/A
eggNOG-mapper	UHGV-2154688_6	1235802.C823_04730	51.2	0.0000000589	N/A	N/A
PHROG	UHGV-2154688_7	phrog_1305	57.5	2.1e-16	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2154688_7	UniRef90_A0A3A6EAL3	166.0	0	N/A	N/A
eggNOG-mapper	UHGV-2154688_7	748224.HMPREF9436_01446	206.0	0	N/A	N/A
structural_annotation	UHGV-2154688_11	PF15582,MF_00791,NF041178,COG2847	N/A	N/A	N/A	N/A
PHROG	UHGV-2154688_12	phrog_2232	188.5	0	N/A	unknown function
UniRef90	UHGV-2154688_12	UniRef90_A0A6A7K9D3	164.0	0	N/A	N/A
eggNOG-mapper	UHGV-2154688_12	748224.HMPREF9436_01448	547.0	0	N/A	N/A
Pfam	UHGV-2154688_12	PF14337	N/A	N/A	Abortive infection alpha	Abi_alpha
structural_annotation	UHGV-2154688_12	PF14337,TIGR03899	N/A	N/A	N/A	N/A
PHROG	UHGV-2154688_14	phrog_518	115.4	3.5e-34	Rha-like transcriptional regulator	transcription regulation
UniRef90	UHGV-2154688_14	UniRef90_E2ZIF5	371.0	0	Phage regulatory protein, Rha family	N/A
eggNOG-mapper	UHGV-2154688_14	748224.HMPREF9436_01449	371.0	0	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-2154688_14	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-2154688_14	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-2154688_14	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-2154688_14	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-2154688_15	phrog_6058	49.4	0.000000000000038	N/A	unknown function
UniRef90	UHGV-2154688_15	UniRef90_E2ZIF6	285.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-2154688_15	748224.HMPREF9436_01450	285.0	0	N/A	N/A
Pfam	UHGV-2154688_15	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
structural_annotation	UHGV-2154688_15	PF01381,PF12728,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-2154688_20	UniRef90_UPI001D0E65C2	127.0	1.22e-35	N/A	N/A
structural_annotation	UHGV-2154688_20	PF12957	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2154688_21	PF03677	N/A	N/A	N/A	N/A
PHROG	UHGV-2154688_23	phrog_1366	241.2	0	N/A	unknown function
UniRef90	UHGV-2154688_23	UniRef90_R6S946	337.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-2154688_23	748224.HMPREF9436_01458	597.0	0	AAA domain	N/A
Pfam	UHGV-2154688_23	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-2154688_23	COG0468	N/A	N/A	RecA/RadA recombinase	N/A
structural_annotation	UHGV-2154688_23	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2154688_24	PF03838,MF_00130,TIGR00648,COG3331	N/A	N/A	N/A	N/A
KOfam	UHGV-2154688_25	K18959	199.0	0	uvsW; ATP-dependent DNA helicase UvsW [EC:5.6.2.4]	N/A
PHROG	UHGV-2154688_25	phrog_16	200.4	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2154688_25	UniRef90_E2ZIG6	903.0	0	Helicase C-terminal domain protein	N/A
eggNOG-mapper	UHGV-2154688_25	748224.HMPREF9436_01460	903.0	0	Type III restriction protein res subunit	N/A
PADLOC	UHGV-2154688_25	mREase_IV_00004	43.7	0.0000000000019	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-2154688_25	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-2154688_25	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-2154688_25	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-2154688_25	PF04851,PF16203,MF_01489,TIGR00603,COG1061	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2154688_26	PF05037	N/A	N/A	N/A	N/A
KOfam	UHGV-2154688_27	K06919	110.7	1.2e-32	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-2154688_27	phrog_1829	685.2	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2154688_27	UniRef90_E2ZIG8	1622.0	0	Nucleoside triphosphatase, D5 family	N/A
eggNOG-mapper	UHGV-2154688_27	748224.HMPREF9436_01462	1622.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-2154688_27	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-2154688_27	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-2154688_27	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-2154688_27	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-2154688_27	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-2154688_27	PF08706,PF05272,PF02257,MF_04000,NF011296,COG3378,COG4983	N/A	N/A	N/A	N/A
PHROG	UHGV-2154688_28	phrog_36	51.1	0.000000000000026	transcriptional regulator	transcription regulation
UniRef90	UHGV-2154688_28	UniRef90_A0A3E2U224	132.0	3.41e-37	Sigma70_r4_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-2154688_28	748224.HMPREF9436_01463	267.0	0	N/A	N/A
structural_annotation	UHGV-2154688_28	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-2154688_29	K07474	152.8	2.8026e-45	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-2154688_29	phrog_51	148.2	3.64338e-44	terminase small subunit	head and packaging
UniRef90	UHGV-2154688_29	UniRef90_A0A3A6JQY9	307.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-2154688_29	742740.HMPREF9474_03499	173.0	0	Terminase Small Subunit	N/A
Pfam	UHGV-2154688_29	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-2154688_29	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
KOfam	UHGV-2154688_30	K06909	101.7	6e-30	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2154688_30	phrog_10250	130.9	6.6e-39	N/A	unknown function
UniRef90	UHGV-2154688_30	UniRef90_UPI001D0F3A3B	694.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-2154688_30	748224.HMPREF9436_03341	586.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-2154688_30	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-2154688_30	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
COG	UHGV-2154688_30	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2154688_30	PF04466,PF20441,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-2154688_31	K09961	392.8	0	N/A	N/A
PHROG	UHGV-2154688_31	phrog_146	406.4	0	portal protein	head and packaging
UniRef90	UHGV-2154688_31	UniRef90_UPI001D0EF633	880.0	0	N/A	N/A
eggNOG-mapper	UHGV-2154688_31	1007096.BAGW01000022_gene2656	528.0	0	TIGRFAM phage-associated protein, HI1409 family	N/A
Pfam	UHGV-2154688_31	PF06381	N/A	N/A	Anti-CBASS protein Acb1-like	Abc1-like
NCBIFam	UHGV-2154688_31	TIGR01555.1	N/A	N/A	phage-associated protein, HI1409 family	N/A
COG	UHGV-2154688_31	COG3567	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2154688_31	PF06381,MF_04135,TIGR01555,NF033819,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-2154688_33	phrog_3675	112.0	2.2e-33	N/A	unknown function
UniRef90	UHGV-2154688_33	UniRef90_UPI001651696B	137.0	9.97e-40	YjcQ family protein	N/A
eggNOG-mapper	UHGV-2154688_33	521003.COLINT_02299	89.7	8.22e-22	YjcQ protein	N/A
Pfam	UHGV-2154688_33	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-2154688_33	PF09639,TIGR04176,COG2345	N/A	N/A	N/A	N/A
PHROG	UHGV-2154688_34	phrog_581	176.8	0	minor head protein	head and packaging
UniRef90	UHGV-2154688_34	UniRef90_UPI0012DFAA79	644.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-2154688_34	742738.HMPREF9460_02508	537.0	0	Portal protein	N/A
Pfam	UHGV-2154688_34	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-2154688_34	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-2154688_34	PF06152	N/A	N/A	N/A	N/A
KOfam	UHGV-2154688_35	K09960	225.7	0	N/A	N/A
PHROG	UHGV-2154688_35	phrog_16985	294.9	0	N/A	unknown function
UniRef90	UHGV-2154688_35	UniRef90_UPI0015930320	192.0	0	N/A	N/A
eggNOG-mapper	UHGV-2154688_35	742738.HMPREF9460_02512	243.0	0	N/A	N/A
Pfam	UHGV-2154688_35	PF09979	N/A	N/A	N/A	DUF2213
COG	UHGV-2154688_35	COG3566	N/A	N/A	N/A	N/A
PHROG	UHGV-2154688_36	phrog_563	169.4	0	virion structural protein	head and packaging
UniRef90	UHGV-2154688_36	UniRef90_UPI00164A2541	149.0	6.65056e-42	head fiber protein	N/A
eggNOG-mapper	UHGV-2154688_36	742738.HMPREF9460_02514	201.0	0	N/A	N/A
structural_annotation	UHGV-2154688_36	PF09956	N/A	N/A	N/A	N/A
PHROG	UHGV-2154688_37	phrog_264	224.3	0	major head protein	head and packaging
UniRef90	UHGV-2154688_37	UniRef90_UPI001D0E1138	477.0	0	N/A	N/A
eggNOG-mapper	UHGV-2154688_37	742738.HMPREF9460_02515	512.0	0	N/A	N/A
Pfam	UHGV-2154688_37	PF09950	N/A	N/A	N/A	DUF2184
COG	UHGV-2154688_37	COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2154688_37	PF09950,MF_04113,TIGR01554,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-2154688_38	phrog_29824	81.8	4.6e-24	N/A	unknown function
PHROG	UHGV-2154688_39	phrog_302	101.8	4e-30	virion structural protein	head and packaging
UniRef90	UHGV-2154688_39	UniRef90_UPI0012DE5897	266.0	0	N/A	N/A
eggNOG-mapper	UHGV-2154688_39	742738.HMPREF9460_02517	202.0	0	N/A	N/A
Pfam	UHGV-2154688_39	PF13262	N/A	N/A	N/A	DUF4054
structural_annotation	UHGV-2154688_39	PF13262	N/A	N/A	N/A	N/A
PHROG	UHGV-2154688_40	phrog_615	86.6	2.1e-25	head-tail adaptor	connector
structural_annotation	UHGV-2154688_40	PF12206,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2154688_41	phrog_5	46.3	0.00000000000089	tail completion or Neck1 protein	connector
UniRef90	UHGV-2154688_41	UniRef90_UPI001D0F331F	233.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-2154688_41	398512.JQKC01000052_gene2665	54.3	0.000000588	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-2154688_41	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-2154688_41	PF04883,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-2154688_42	phrog_525	62.7	6.6e-18	N/A	unknown function
Pfam	UHGV-2154688_42	PF20765	N/A	N/A	N/A	DUF6838
structural_annotation	UHGV-2154688_42	PF20765,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-2154688_43	phrog_30826	62.1	6.4e-18	N/A	unknown function
PHROG	UHGV-2154688_44	phrog_279	313.0	0	tail sheath	tail
UniRef90	UHGV-2154688_44	UniRef90_UPI001D0EEC02	685.0	0	phage tail sheath family protein	N/A
eggNOG-mapper	UHGV-2154688_44	742738.HMPREF9460_02522	570.0	0	Phage tail sheath C-terminal domain	N/A
Pfam	UHGV-2154688_44	PF17481	N/A	N/A	Phage tail sheath protein beta-sandwich domain	Phage_sheath_1N
Pfam	UHGV-2154688_44	PF04984	N/A	N/A	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
Pfam	UHGV-2154688_44	PF17482	N/A	N/A	Phage tail sheath C-terminal domain	Phage_sheath_1C
structural_annotation	UHGV-2154688_44	PF17482,PF04984,PF17481,COG4386	N/A	N/A	N/A	N/A
PHROG	UHGV-2154688_45	phrog_365	95.2	5.9e-28	tail protein	tail
UniRef90	UHGV-2154688_45	UniRef90_UPI001D0EDD9D	259.0	0	phage tail tube protein	N/A
eggNOG-mapper	UHGV-2154688_45	742738.HMPREF9460_02523	199.0	0	Phage tail tube protein	N/A
Pfam	UHGV-2154688_45	PF09393	N/A	N/A	Phage tail tube protein	DUF2001
structural_annotation	UHGV-2154688_45	PF09393,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2154688_46	phrog_389	131.7	3.2e-39	tail protein XkdN-like	tail
UniRef90	UHGV-2154688_46	UniRef90_UPI0012DFD344	180.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-2154688_46	742738.HMPREF9460_02524	142.0	4.77983e-42	Phage XkdN-like tail assembly chaperone protein, TAC	N/A
Pfam	UHGV-2154688_46	PF08890	N/A	N/A	Phage XkdN-like tail assembly chaperone protein, TAC	Phage_TAC_5
structural_annotation	UHGV-2154688_46	PF08890,COG4518	N/A	N/A	N/A	N/A
PHROG	UHGV-2154688_47	phrog_1068	285.2	0	tail length tape measure protein	tail
UniRef90	UHGV-2154688_47	UniRef90_UPI0012DBDA0E	439.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-2154688_47	742738.HMPREF9460_02526	255.0	0	tape measure	N/A
Pfam	UHGV-2154688_47	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-2154688_47	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-2154688_47	COG5281	N/A	N/A	Phage-related minor tail protein	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2154688	Yes	31,268	57	73	1
UHGV-0078167	No	34,305	55	83	1
UHGV-2105420	No	20,607	59	48	1