vOTU vOTU-027207

vOTU: vOTU-027207

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-027207
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-01513 → vGENUS-01525 → vOTU-027207
Host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-138 → RUG472 → RUG472 sp900545265
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0014304
Biosample ID	SAMEA4765647
Genome length (bp)	23,351 bps
CheckV completeness	66.71% (Medium-quality)
CDS count	34
CDS density	95.03%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-138 → RUG472 → RUG472 sp900545265	Total connections	273	Host agreement	99.27
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-138 → RUG472 → RUG472 sp900545265	Total connections	5	Host agreement	80

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 66.71)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0014304_2	phrog_36	61.5	1.4e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0014304_2	UniRef90_A0A7C6P5S1	69.3	0.00000000000246	RNA polymerase subunit sigma-24	N/A
eggNOG-mapper	UHGV-0014304_2	1121335.Clst_0383	75.5	0.00000000000000187	N/A	N/A
structural_annotation	UHGV-0014304_2	PF02996	N/A	N/A	N/A	N/A
KOfam	UHGV-0014304_3	K07451	53.8	0.0000000000000039	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0014304_3	phrog_119	86.8	2.5e-25	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0014304_3	UniRef90_A0A0D8IV26	125.0	4.78e-36	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0014304_3	1226322.HMPREF1545_00111	114.0	2.18e-32	HNH nucleases	N/A
Pfam	UHGV-0014304_3	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0014304_3	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0014304_3	TIGR02646	N/A	N/A	N/A	N/A
PHROG	UHGV-0014304_4	phrog_361	64.0	2.4e-18	terminase small subunit	head and packaging
UniRef90	UHGV-0014304_4	UniRef90_A0A1C6H6I9	142.0	2.25006e-41	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0014304_4	1033744.CAEL01000029_gene1286	84.0	3.11e-19	Phage terminase, small subunit	N/A
Pfam	UHGV-0014304_4	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0014304_4	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0014304_5	phrog_9	293.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0014304_5	UniRef90_A0A2V2GQ67	1007.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0014304_5	1226322.HMPREF1545_00113	910.0	0	Phage Terminase	N/A
Pfam	UHGV-0014304_5	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0014304_5	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0014304_5	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0014304_5	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0014304_6	phrog_12	186.6	0	portal protein	head and packaging
UniRef90	UHGV-0014304_6	UniRef90_A0A0D8IVL0	580.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0014304_6	1226322.HMPREF1545_00114	483.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0014304_6	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0014304_6	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0014304_6	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0014304_6	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0014304_7	K06904	145.5	3.9937e-43	N/A	N/A
PHROG	UHGV-0014304_7	phrog_80	165.1	0	head maturation protease	head and packaging
UniRef90	UHGV-0014304_7	UniRef90_U2SBX0	291.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-0014304_7	1226322.HMPREF1545_00115	291.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0014304_7	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0014304_7	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0014304_7	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0014304_7	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0014304_8	phrog_10	220.6	0	major head protein	head and packaging
UniRef90	UHGV-0014304_8	UniRef90_A0A1C6H720	647.0	0	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
eggNOG-mapper	UHGV-0014304_8	1226322.HMPREF1545_00116	579.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0014304_8	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0014304_8	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0014304_8	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0014304_8	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0014304_9	phrog_2550	80.8	8.5e-24	N/A	unknown function
UniRef90	UHGV-0014304_9	UniRef90_R5V091	77.8	7.63e-17	Phage related protein	N/A
eggNOG-mapper	UHGV-0014304_9	1226322.HMPREF1545_00117	93.2	1.07e-23	N/A	N/A
structural_annotation	UHGV-0014304_9	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0014304_10	phrog_19734	80.9	1.5e-23	N/A	unknown function
UniRef90	UHGV-0014304_10	UniRef90_A0A3R6AW46	96.3	2.02e-23	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0014304_10	1235798.C817_04587	77.8	5.65e-17	N/A	N/A
structural_annotation	UHGV-0014304_10	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0014304_11	1235798.C817_04588	79.3	9.42e-18	N/A	N/A
structural_annotation	UHGV-0014304_11	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0014304_12	phrog_5	45.5	0.0000000000014	tail completion or Neck1 protein	connector
UniRef90	UHGV-0014304_12	UniRef90_R6UNR2	144.0	5.57002e-41	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0014304_12	908340.HMPREF9406_2573	144.0	9.33965e-42	N/A	N/A
structural_annotation	UHGV-0014304_12	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0014304_13	phrog_88	89.4	3.3e-26	major tail protein	tail
NCBIFam	UHGV-0014304_13	TIGR01603.1	N/A	N/A	major tail protein	N/A
KOfam	UHGV-0014304_16	K10866	44.3	0.0000000000004	RAD50; DNA repair protein RAD50 [EC:3.6.-.-]	N/A
PHROG	UHGV-0014304_16	phrog_3981	75.2	9.9e-22	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0014304_16	720554.Clocl_3669	229.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0014304_16	COG5185	N/A	N/A	Chromosome segregation protein NDC80, interacts with SMC proteins	N/A
structural_annotation	UHGV-0014304_16	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-0014304_17	phrog_33	67.8	2.5e-19	distal tail protein Dit	tail
UniRef90	UHGV-0014304_17	UniRef90_A0A1C6H6D2	166.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0014304_17	1567011.A0A0A7RWN1_9VIRU	105.0	6.47e-25	Phage tail protein	N/A
structural_annotation	UHGV-0014304_17	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0014304_18	phrog_1067	211.0	0	minor head protein	head and packaging
UniRef90	UHGV-0014304_18	UniRef90_A0A1C6H6B4	348.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0014304_18	1123263.AUKY01000068_gene489	286.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0014304_18	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0014304_18	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0014304_18	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0014304_18	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0014304_19	phrog_372	160.5	0	tail protein	tail
UniRef90	UHGV-0014304_19	UniRef90_UPI00195FD9F2	98.2	1.28e-17	N/A	N/A
eggNOG-mapper	UHGV-0014304_19	658659.HMPREF0983_03294	127.0	1.24e-28	N/A	N/A
Pfam	UHGV-0014304_19	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0014304_19	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0014304_19	PF05895,MF_04116,NF010681,COG1361	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0014304_21	PF20622,NF032891	N/A	N/A	N/A	N/A
KOfam	UHGV-0014304_26	K21471	68.3	1.7e-19	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	N/A
PHROG	UHGV-0014304_26	phrog_329	48.5	0.0000000000000066	minor tail protein	tail
UniRef90	UHGV-0014304_26	UniRef90_A0A316PD96	84.3	3.03e-16	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-0014304_26	246194.CHY_0674	56.2	0.00000187	NlpC/P60 family	N/A
Pfam	UHGV-0014304_26	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
Pfam	UHGV-0014304_26	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0014304_26	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0014304_26	PF00877,PF18342,NF033742,NF041850,COG0791,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0014304_27	phrog_1863	57.5	1.4e-16	N/A	unknown function
UniRef90	UHGV-0014304_27	UniRef90_UPI001F2EB35F	77.4	2.22e-16	hemolysin XhlA family protein	N/A
eggNOG-mapper	UHGV-0014304_27	1235797.C816_02840	110.0	1.84e-30	N/A	N/A
UniRef90	UHGV-0014304_29	UniRef90_A0A354CP49	56.6	0.00000000488	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0014304_29	1408437.JNJN01000040_gene204	73.2	3.58e-16	N/A	N/A
structural_annotation	UHGV-0014304_29	PF13560,TIGR02612,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0014304_32	phrog_18108	73.6	2.2e-21	N/A	unknown function
UniRef90	UHGV-0014304_32	UniRef90_UPI0018C3A07F	87.4	1.2e-17	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0014304_32	1193128.A200_07674	68.2	0.0000000000166	N/A	N/A
AcrCatalog	UHGV-0014304_32	cluster_115962	63.9	0.000000000000016	NA	N/A
structural_annotation	UHGV-0014304_32	PF07443	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0014304_33	397290.C810_01347	55.5	0.00000000124	N/A	N/A
structural_annotation	UHGV-0014304_33	PF18267	N/A	N/A	N/A	N/A
PHROG	UHGV-0014304_34	phrog_12389	71.6	8.8e-21	N/A	unknown function
eggNOG-mapper	UHGV-0014304_34	693746.OBV_p-00550	71.6	0.000000000000488	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0014304	Yes	23,351	54	67	1
UHGV-0025208	No	17,575	54	50	1