vOTU vOTU-027837

vOTU: vOTU-027837

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-027837
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00027 → vSUBFAM-00430 → vGENUS-02630 → vOTU-027837
Host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0158157
Biosample ID	SAMN06110051
Genome length (bp)	34,760 bps
CheckV completeness	69.76% (Medium-quality)
CDS count	47
CDS density	90.79%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium	Total connections	224	Host agreement	96.43
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 69.76)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0158157_2	phrog_159	44.0	0.0000000000026	RuvC-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-0158157_2	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-0158157_4	phrog_1706	54.1	0.0000000000000026	CRISPR/Cas system associated	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0158157_4	1499968.TCA2_4616	55.5	0.00000498	DNA catabolic process, exonucleolytic	N/A
COG	UHGV-0158157_4	COG1468	N/A	N/A	CRISPR/Cas system-associated exonuclease Cas4, RecB family	N/A
structural_annotation	UHGV-0158157_4	PF01930,MF_03030,TIGR00372,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-0158157_13	K03553	181.6	0	recA; recombination protein RecA	N/A
PHROG	UHGV-0158157_13	phrog_97	172.9	0	UvsX-like recombinase	other
UniRef90	UHGV-0158157_13	UniRef90_A0A843GSV7	389.0	0	RECA_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0158157_13	1121267.JHZL01000006_gene901	144.0	1.12e-37	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage	N/A
Pfam	UHGV-0158157_13	PF00154	N/A	N/A	recA bacterial DNA recombination protein	RecA
COG	UHGV-0158157_13	COG0468	N/A	N/A	RecA/RadA recombinase	N/A
structural_annotation	UHGV-0158157_13	PF00154,MF_00268,TIGR02012,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-0158157_15	K02337	731.3	0	dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]	N/A
PHROG	UHGV-0158157_15	phrog_405	690.1	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0158157_15	UniRef90_A0A843GPT9	1098.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-0158157_15	1158345.JNLL01000001_gene729	405.0	0	TIGRFAM DNA polymerase III, alpha subunit	N/A
Pfam	UHGV-0158157_15	PF02811	N/A	N/A	PHP domain	PHP
Pfam	UHGV-0158157_15	PF07733	N/A	N/A	Bacterial DNA polymerase III alpha NTPase domain	DNA_pol3_alpha
Pfam	UHGV-0158157_15	PF17657	N/A	N/A	Bacterial DNA polymerase III alpha subunit finger domain	DNA_pol3_finger
Pfam	UHGV-0158157_15	PF14579	N/A	N/A	Helix-hairpin-helix motif	HHH_6
NCBIFam	UHGV-0158157_15	TIGR00594.1	N/A	N/A	DNA polymerase III subunit alpha	N/A
COG	UHGV-0158157_15	COG0587	N/A	N/A	DNA polymerase III, alpha subunit	N/A
structural_annotation	UHGV-0158157_15	PF07733,PF02811,PF17657,PF14579,MF_01902,TIGR00594,COG0587	N/A	N/A	N/A	N/A
PHROG	UHGV-0158157_16	phrog_236	90.3	4.3e-26	nucleotide kinase	other
UniRef90	UHGV-0158157_16	UniRef90_UPI001D04CE99	123.0	2.84e-35	N/A	N/A
eggNOG-mapper	UHGV-0158157_16	1123263.AUKY01000015_gene1590	82.8	5e-20	N/A	N/A
Pfam	UHGV-0158157_16	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-0158157_16	PF11753	N/A	N/A	N/A	N/A
UniRef90	UHGV-0158157_17	UniRef90_A0A7X8WD06	74.7	0.0000000000000201	N/A	N/A
structural_annotation	UHGV-0158157_18	PF08804	N/A	N/A	N/A	N/A
KOfam	UHGV-0158157_19	K02316	139.1	3.69999e-41	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0158157_19	phrog_47	133.0	2.9e-39	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0158157_19	UniRef90_A0A843GN62	347.0	0	Toprim domain-containing protein	N/A
eggNOG-mapper	UHGV-0158157_19	573061.Clocel_1457	89.7	7.51e-17	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	N/A
PADLOC	UHGV-0158157_19	drt-UG29	42.9	1.7e-22	DRT	DRT
Pfam	UHGV-0158157_19	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
Pfam	UHGV-0158157_19	PF13155	N/A	N/A	Toprim-like	Toprim_2
COG	UHGV-0158157_19	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0158157_19	PF01807,PF13155,MF_00974,TIGR01391,COG0358	N/A	N/A	N/A	N/A
PHROG	UHGV-0158157_22	phrog_937	64.9	1.4e-18	hemolysin	other
eggNOG-mapper	UHGV-0158157_22	742740.HMPREF9474_03172	114.0	6.74e-32	N/A	N/A
PHROG	UHGV-0158157_23	phrog_1220	215.8	0	head protein	head and packaging
UniRef90	UHGV-0158157_23	UniRef90_A0A6B3YJZ4	149.0	4.3e-39	Phage tail protein (Fragment)	N/A
eggNOG-mapper	UHGV-0158157_23	536232.CLM_2920	156.0	1.51004e-41	N/A	N/A
structural_annotation	UHGV-0158157_23	PF08931,PF20747	N/A	N/A	N/A	N/A
PHROG	UHGV-0158157_24	phrog_538	256.1	0	minor tail protein	tail
UniRef90	UHGV-0158157_24	UniRef90_UPI00067EC57D	192.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0158157_24	536232.CLM_2044	179.0	0	Siphovirus ReqiPepy6 Gp37-like protein	N/A
Pfam	UHGV-0158157_24	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0158157_24	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0158157_25	phrog_36410	111.0	8.6e-33	N/A	unknown function
UniRef90	UHGV-0158157_25	UniRef90_A0A7X9C3E1	349.0	0	Phage tail family protein	N/A
eggNOG-mapper	UHGV-0158157_25	536232.CLM_2045	143.0	6.06e-38	Phage tail protein	N/A
Pfam	UHGV-0158157_25	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-0158157_25	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0158157_25	PF20753,PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0158157_26	phrog_1533	486.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0158157_26	UniRef90_A0A351TJS6	366.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0158157_26	1410670.JHXF01000015_gene2302	364.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0158157_26	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0158157_26	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0158157_26	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0158157_26	PF10145,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0158157_27	phrog_6280	115.2	3e-34	N/A	unknown function
UniRef90	UHGV-0158157_27	UniRef90_A0A8J6PH67	113.0	6.91e-29	Esterase	N/A
eggNOG-mapper	UHGV-0158157_27	445335.CBN_3078	102.0	3.46e-25	N/A	N/A
PHROG	UHGV-0158157_28	phrog_6686	141.1	6.99949e-42	tail tube protein	tail
UniRef90	UHGV-0158157_28	UniRef90_A0A1C6KI12	166.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0158157_28	1304880.JAGB01000002_gene2211	115.0	1.17e-29	N/A	N/A
structural_annotation	UHGV-0158157_28	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0158157_29	phrog_7585	65.8	7.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-0158157_29	1196322.A370_04060	63.5	0.0000000000557	N/A	N/A
eggNOG-mapper	UHGV-0158157_30	632292.Calhy_0769	79.3	1.34e-17	Phage virion morphogenesis	N/A
COG	UHGV-0158157_30	COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0158157_30	PF04883,TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0158157_31	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0158157_32	phrog_4020	63.8	2.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-0158157_32	1121342.AUCO01000012_gene1692	51.2	0.000000263	N/A	N/A
structural_annotation	UHGV-0158157_33	PF08593	N/A	N/A	N/A	N/A
PHROG	UHGV-0158157_34	phrog_29	265.1	0	major head protein	head and packaging
UniRef90	UHGV-0158157_34	UniRef90_UPI00082C04A5	377.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0158157_34	1158612.I580_01912	324.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0158157_34	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0158157_34	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0158157_35	1158607.UAU_01759	54.7	0.000000101	N/A	N/A
structural_annotation	UHGV-0158157_35	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-0158157_36	phrog_2303	82.9	4.8e-24	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0158157_36	997296.PB1_16214	65.9	0.000000000352	N/A	N/A
structural_annotation	UHGV-0158157_36	PF10788,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-0158157_37	phrog_1315	42.1	0.000000000012	N/A	unknown function
structural_annotation	UHGV-0158157_38	PF06133	N/A	N/A	N/A	N/A
KOfam	UHGV-0158157_40	K11044	69.3	6.7e-20	spyA; C3 family ADP-ribosyltransferase [EC:2.4.2.-]	N/A
PHROG	UHGV-0158157_40	phrog_1657	159.6	0	head morphogenesis	head and packaging
UniRef90	UHGV-0158157_40	UniRef90_A0A349YJR5	731.0	0	ADPrib_exo_Tox domain-containing protein	N/A
eggNOG-mapper	UHGV-0158157_40	1567015.A0A0A7RUI1_9VIRU	140.0	2.25e-32	Phage Mu protein F like protein	N/A
Pfam	UHGV-0158157_40	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
structural_annotation	UHGV-0158157_40	PF03496,NF040688	N/A	N/A	N/A	N/A
PHROG	UHGV-0158157_41	phrog_64	113.3	1.7e-33	portal protein	head and packaging
UniRef90	UHGV-0158157_41	UniRef90_A0A843GSM3	400.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0158157_41	1121342.AUCO01000012_gene1700	149.0	1.63e-36	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0158157_41	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0158157_41	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0158157_42	K01448	130.3	1.9e-38	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0158157_42	phrog_435	199.5	0	endolysin	lysis
UniRef90	UHGV-0158157_42	UniRef90_B0G4K0	252.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0158157_42	411461.DORFOR_01187	252.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0158157_42	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0158157_42	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0158157_42	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0158157_42	PF01520,PF01471,MF_00562,TIGR02883,NF038080,COG0860,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0158157_43	phrog_443	56.3	9.4e-16	holin	lysis
UniRef90	UHGV-0158157_43	UniRef90_UPI000C75746C	110.0	2.02e-30	holin	N/A
eggNOG-mapper	UHGV-0158157_43	626523.GCWU000342_01012	87.4	1.04e-21	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0158157_43	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0158157_43	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0158157_44	phrog_17134	53.5	0.0000000000000013	N/A	unknown function
KOfam	UHGV-0158157_46	K06909	287.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0158157_46	phrog_3717	132.3	1.49995e-41	terminase large subunit	head and packaging
UniRef90	UHGV-0158157_46	UniRef90_A0A349YI29	659.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0158157_46	536232.CLM_2529	464.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0158157_46	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0158157_46	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0158157_46	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0158157_46	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0158157_46	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0158157_47	phrog_309	122.2	3.5e-36	terminase small subunit	head and packaging
UniRef90	UHGV-0158157_47	UniRef90_A0A843GSL4	132.0	2.08e-35	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0158157_47	742733.HMPREF9469_01828	101.0	1.36e-24	transposase activity	N/A
Pfam	UHGV-0158157_47	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
COG	UHGV-0158157_47	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0158157	Yes	34,760	34	70	1
UHGV-1690427	No	20,210	35	40	1