vOTU vOTU-027870

vOTU: vOTU-027870

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-027870
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vGENUS-04137 → vOTU-027870
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1441372
Biosample ID	N/A
Genome length (bp)	29,248 bps
CheckV completeness	69.21% (Medium-quality)
CDS count	45
CDS density	93.43%
tRNA count	3
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	791	Host agreement	97.6
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 69.21)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1441372_2	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-1441372_3	phrog_20016	194.1	0	N/A	unknown function
UniRef90	UHGV-1441372_3	UniRef90_A0A285PT46	206.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1441372_3	1226322.HMPREF1545_00077	180.0	0	N/A	N/A
structural_annotation	UHGV-1441372_3	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1441372_4	phrog_16490	193.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1441372_4	397290.C810_01328	142.0	7.3e-38	N/A	N/A
PHROG	UHGV-1441372_5	phrog_22984	70.3	2.3e-20	N/A	unknown function
PHROG	UHGV-1441372_6	phrog_21718	87.9	1.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-1441372_6	397290.C810_05210	83.6	3.73e-18	N/A	N/A
PHROG	UHGV-1441372_7	phrog_3754	98.7	5.2e-29	N/A	unknown function
eggNOG-mapper	UHGV-1441372_7	1485543.JMME01000025_gene2462	102.0	5.62e-27	N/A	N/A
COG	UHGV-1441372_10	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1441372_10	PF13560,NF040522	N/A	N/A	N/A	N/A
PHROG	UHGV-1441372_11	phrog_99	42.6	0.0000000000076	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1441372_11	UniRef90_A0A0K9N8D8	94.4	9.27e-20	Putative AP2 domain protein	N/A
eggNOG-mapper	UHGV-1441372_11	742740.HMPREF9474_00071	96.3	2.87e-21	N/A	N/A
structural_annotation	UHGV-1441372_11	PF18337,PF00847	N/A	N/A	N/A	N/A
KOfam	UHGV-1441372_14	K24213	73.5	1.7e-21	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-1441372_14	phrog_5073	103.2	1.9e-30	tail fiber protein	tail
UniRef90	UHGV-1441372_14	UniRef90_UPI0018835F0C	642.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-1441372_14	411483.FAEPRAA2165_00757	169.0	1.54143e-44	N/A	N/A
Pfam	UHGV-1441372_14	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-1441372_14	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-1441372_15	phrog_15303	114.0	6.6e-34	N/A	unknown function
Pfam	UHGV-1441372_15	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
KOfam	UHGV-1441372_17	K07273	179.2	0	acm; lysozyme	N/A
PHROG	UHGV-1441372_17	phrog_291	145.7	3.40516e-43	endolysin	lysis
UniRef90	UHGV-1441372_17	UniRef90_E2ZES5	345.0	0	Glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-1441372_17	748224.HMPREF9436_00154	345.0	0	hydrolase, family 25	N/A
Pfam	UHGV-1441372_17	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1441372_17	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1441372_17	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-1441372_18	phrog_1382	46.0	0.00000000000039	N/A	unknown function
PHROG	UHGV-1441372_20	phrog_9534	40.2	0.000000000036	head protein	head and packaging
eggNOG-mapper	UHGV-1441372_20	748224.HMPREF9436_01407	204.0	0	COG NOG18825 non supervised orthologous group	N/A
PHROG	UHGV-1441372_21	phrog_3558	184.0	0	tail protein	tail
UniRef90	UHGV-1441372_21	UniRef90_UPI001C01D15B	141.0	5.97e-32	phage tail protein	N/A
eggNOG-mapper	UHGV-1441372_21	411460.RUMTOR_00484	125.0	2.37e-27	Prophage endopeptidase tail	N/A
Pfam	UHGV-1441372_21	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-1441372_21	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1441372_21	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
UniRef90	UHGV-1441372_22	UniRef90_A0A417QGC1	117.0	1.6e-28	MtfA protein	N/A
eggNOG-mapper	UHGV-1441372_22	411490.ANACAC_00709	103.0	7.63e-24	phage tail	N/A
COG	UHGV-1441372_22	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1441372_22	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1441372_23	phrog_9959	100.3	1.1e-29	tail length tape measure protein	tail
UniRef90	UHGV-1441372_23	UniRef90_A0A6N7TLD3	1201.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-1441372_23	883066.HMPREF9233_00612	127.0	5.95e-27	tape measure	N/A
Pfam	UHGV-1441372_23	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1441372_23	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1441372_23	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1441372_23	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1441372_26	phrog_885	60.4	2.1e-17	major tail protein	tail
eggNOG-mapper	UHGV-1441372_26	1111121.HMPREF1247_0789	117.0	3.22e-30	N/A	N/A
structural_annotation	UHGV-1441372_26	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1441372_27	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-1441372_28	phrog_17977	41.8	0.000000000014	N/A	unknown function
UniRef90	UHGV-1441372_28	UniRef90_A0A844DHJ8	119.0	3.28e-32	Phage head closure protein	N/A
structural_annotation	UHGV-1441372_28	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1441372_30	phrog_544	108.1	7.6e-32	major head protein	head and packaging
UniRef90	UHGV-1441372_30	UniRef90_A0A1C6B5R0	320.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1441372_30	476272.RUMHYD_01776	282.0	0	N/A	N/A
structural_annotation	UHGV-1441372_30	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
UniRef90	UHGV-1441372_31	UniRef90_A0A6B9SU02	82.8	3.58e-16	Fibronectin autolysin	N/A
structural_annotation	UHGV-1441372_31	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1441372_33	phrog_5	51.7	0.00000000000002	tail completion or Neck1 protein	connector
UniRef90	UHGV-1441372_33	UniRef90_A0A6N7TNP6	296.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1441372_33	1123309.AQYB01000018_gene814	92.0	7.95e-22	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1441372_33	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1441372_33	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1441372_34	phrog_21498	301.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1441372_34	78346.BRUM_0376	266.0	0	DNA binding	N/A
COG	UHGV-1441372_34	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1441372_34	PF05869,TIGR01712	N/A	N/A	N/A	N/A
PHROG	UHGV-1441372_35	phrog_2468	91.0	8.8e-27	head morphogenesis	head and packaging
UniRef90	UHGV-1441372_35	UniRef90_A0A6N7TLR7	618.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1441372_35	386415.NT01CX_2177	103.0	7.51e-22	Phage Mu protein F like protein	N/A
Pfam	UHGV-1441372_35	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-1441372_35	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1441372_35	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1441372_37	phrog_64	120.0	7.6e-36	portal protein	head and packaging
UniRef90	UHGV-1441372_37	UniRef90_A0A6N7TNT3	862.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1441372_37	642492.Clole_2764	79.7	0.000000000000411	phage portal protein, SPP1	N/A
Pfam	UHGV-1441372_37	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1441372_37	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-1441372_38	K06909	132.0	5.5e-39	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1441372_38	phrog_10250	168.9	0	N/A	unknown function
UniRef90	UHGV-1441372_38	UniRef90_A0A844D8I4	589.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1441372_38	1226322.HMPREF1545_00043	400.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1441372_38	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1441372_38	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1441372_38	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1441372_38	PF04466,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1441372_39	phrog_606	91.6	7.1e-27	terminase small subunit	head and packaging
UniRef90	UHGV-1441372_39	UniRef90_UPI001D0F42E6	183.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1441372_39	397290.C810_05185	150.0	8.40779e-44	DNA-packaging protein gp3	N/A
Pfam	UHGV-1441372_39	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
PHROG	UHGV-1441372_40	phrog_36	68.3	1.2e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-1441372_40	UniRef90_A0A6N7TNN9	273.0	0	N/A	N/A
eggNOG-mapper	UHGV-1441372_40	748224.HMPREF9436_01463	80.9	2.03e-17	N/A	N/A
Pfam	UHGV-1441372_40	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-1441372_40	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-1441372_42	K01160	61.1	2.8e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1441372_42	phrog_34	62.0	1.1e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1441372_42	UniRef90_A0A6N7TND6	221.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1441372_42	875454.BAEW01000002_gene491	136.0	8.61e-40	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1441372_42	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1441372_42	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1441372_42	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1441372_43	phrog_757	193.3	0	DNA methyltransferase	other
UniRef90	UHGV-1441372_43	UniRef90_A0A355KVL2	373.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1441372_43	748224.HMPREF9436_03069	386.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1441372_43	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1441372_43	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1441372	Yes	29,248	56	69	1
UHGV-0158756	No	29,248	56	69	1
UHGV-1759484	No	20,541	56	49	1