vOTU vOTU-028123

vOTU: vOTU-028123

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-028123
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Eubacterium_I → Eubacterium_I ramulus
Taxonomy (UHGV)	vFAM-00001 → vSUBFAM-01628 → vGENUS-02069 → vOTU-028123
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2057562
Biosample ID	N/A
Genome length (bp)	33,686 bps
CheckV completeness	85.63% (Medium-quality)
CDS count	54
CDS density	92.46%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	65	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Eubacterium_I → Eubacterium_I ramulus	Total connections	42	Host agreement	88.1

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 85.63)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-2057562_1	K14059	71.6	1.4e-20	int; integrase	N/A
PHROG	UHGV-2057562_1	phrog_1	101.6	9.9e-30	integrase	integration and excision
UniRef90	UHGV-2057562_1	UniRef90_UPI00101EF3B7	751.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-2057562_1	1232453.BAIF02000010_gene3323	410.0	0	Phage integrase family	N/A
COG	UHGV-2057562_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2057562_1	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-2057562_2	K14623	80.4	2.8e-23	dinD; DNA-damage-inducible protein D	N/A
PHROG	UHGV-2057562_2	phrog_15286	352.5	0	N/A	unknown function
UniRef90	UHGV-2057562_2	UniRef90_A0A844E3D6	587.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-2057562_2	411459.RUMOBE_00965	400.0	0	N/A	N/A
Pfam	UHGV-2057562_2	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-2057562_2	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-2057562_2	PF09669,NF008573,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-2057562_3	phrog_7115	133.7	6.8e-40	N/A	unknown function
UniRef90	UHGV-2057562_3	UniRef90_A0A173UN76	246.0	0	PH domain-containing protein	N/A
eggNOG-mapper	UHGV-2057562_3	476272.RUMHYD_02184	195.0	0	Bacterial PH domain	N/A
Pfam	UHGV-2057562_3	PF08000	N/A	N/A	Bacterial PH domain	bPH_1
structural_annotation	UHGV-2057562_3	PF08000,MF_00437	N/A	N/A	N/A	N/A
PHROG	UHGV-2057562_5	phrog_87	86.1	3.1e-25	metallo-protease	other
UniRef90	UHGV-2057562_5	UniRef90_A0A844E1N1	321.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-2057562_5	742723.HMPREF9477_00938	170.0	0	Zn peptidase	N/A
Pfam	UHGV-2057562_5	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-2057562_5	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-2057562_5	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-2057562_6	K07727	44.1	0.0000000000051	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-2057562_6	UniRef90_A0A844E6G3	202.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2057562_6	742735.HMPREF9467_01804	74.3	5.6e-16	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-2057562_6	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-2057562_6	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-2057562_7	UniRef90_A0A416GY85	95.5	2.05e-24	XRE family transcriptional regulator	N/A
structural_annotation	UHGV-2057562_7	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2057562_10	PF10743,TIGR01764,COG4220	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2057562_12	PF16311,NF002796	N/A	N/A	N/A	N/A
PHROG	UHGV-2057562_14	phrog_3584	163.5	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-2057562_14	1280698.AUJS01000007_gene1013	360.0	0	N/A	N/A
structural_annotation	UHGV-2057562_14	PF01446	N/A	N/A	N/A	N/A
KOfam	UHGV-2057562_15	K03469	63.9	3.2e-18	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-2057562_15	phrog_531	63.9	1.9e-18	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2057562_15	UniRef90_A0A173UM21	293.0	0	Ribonuclease H	N/A
eggNOG-mapper	UHGV-2057562_15	1235790.C805_03782	80.9	3.38e-17	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-2057562_15	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-2057562_15	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-2057562_15	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
KOfam	UHGV-2057562_16	K03111	137.9	1.10001e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-2057562_16	phrog_44	132.6	2.7e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2057562_16	UniRef90_A0A173UNZ4	259.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-2057562_16	1256908.HMPREF0373_03133	220.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-2057562_16	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-2057562_16	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-2057562_16	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-2057562_16	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-2057562_16	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-2057562_17	phrog_7566	101.5	4.7e-30	N/A	unknown function
eggNOG-mapper	UHGV-2057562_17	1235800.C819_00511	123.0	3.39e-34	N/A	N/A
structural_annotation	UHGV-2057562_18	PF05641	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2057562_19	PF12286,MF_00839,NF007780	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2057562_20	1235792.C808_00065	238.0	0	N/A	N/A
PHROG	UHGV-2057562_21	phrog_8470	385.6	0	N/A	unknown function
UniRef90	UHGV-2057562_21	UniRef90_UPI001D086F83	999.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-2057562_21	97139.C824_00039	1127.0	0	PcfJ-like protein	N/A
Pfam	UHGV-2057562_21	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-2057562_21	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-2057562_22	phrog_15077	114.0	2.4e-33	N/A	unknown function
UniRef90	UHGV-2057562_22	UniRef90_UPI001D0741A0	199.0	0	N/A	N/A
eggNOG-mapper	UHGV-2057562_22	97139.C824_05986	349.0	0	N/A	N/A
structural_annotation	UHGV-2057562_22	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-2057562_23	phrog_33451	47.2	0.00000000000014	N/A	unknown function
UniRef90	UHGV-2057562_23	UniRef90_UPI000CF85C21	107.0	2.97e-27	N/A	N/A
UniRef90	UHGV-2057562_24	UniRef90_R5TJQ4	145.0	3.22299e-44	Carbamoyl-phosphate synthase L chain ATP-binding protein	N/A
PHROG	UHGV-2057562_25	phrog_20593	58.8	2e-17	N/A	unknown function
PHROG	UHGV-2057562_27	phrog_36	55.5	0.0000000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-2057562_27	UniRef90_A0A3D3U8Q6	120.0	2.76e-32	Sigma70_r4 domain-containing protein	N/A
eggNOG-mapper	UHGV-2057562_27	1256908.HMPREF0373_00671	244.0	0	N/A	N/A
structural_annotation	UHGV-2057562_27	PF04545,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-2057562_28	phrog_30856	216.2	0	N/A	unknown function
KOfam	UHGV-2057562_30	K13276	84.2	5.1e-26	bpr; bacillopeptidase F [EC:3.4.21.-]	N/A
PHROG	UHGV-2057562_30	phrog_11157	253.3	0	N/A	unknown function
UniRef90	UHGV-2057562_30	UniRef90_A0A173UNA5	612.0	0	Bacillopeptidase F	N/A
eggNOG-mapper	UHGV-2057562_30	1256908.HMPREF0373_00674	617.0	0	N/A	N/A
Pfam	UHGV-2057562_30	PF19077	N/A	N/A	Bacterial Ig-like domain	Big_13
Pfam	UHGV-2057562_30	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
COG	UHGV-2057562_30	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-2057562_30	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-2057562_31	phrog_32322	63.3	3.3e-18	N/A	unknown function
UniRef90	UHGV-2057562_31	UniRef90_A0A173UQD8	192.0	0	Ig-like_bact domain-containing protein	N/A
eggNOG-mapper	UHGV-2057562_31	1256908.HMPREF0373_00675	173.0	0	N/A	N/A
Pfam	UHGV-2057562_31	PF13754	N/A	N/A	N/A	Big_3_4
structural_annotation	UHGV-2057562_31	PF13754	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2057562_32	PF07703,NF038114,COG5501	N/A	N/A	N/A	N/A
KOfam	UHGV-2057562_33	K07474	143.7	2.10055e-42	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-2057562_33	phrog_51	155.4	0	terminase small subunit	head and packaging
UniRef90	UHGV-2057562_33	UniRef90_U2PKP2	317.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-2057562_33	1256908.HMPREF0373_00489	317.0	0	Terminase small subunit	N/A
Pfam	UHGV-2057562_33	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-2057562_33	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-2057562_33	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-2057562_35	phrog_1233	77.1	2.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-2057562_35	1256908.HMPREF0373_00487	246.0	0	N/A	N/A
structural_annotation	UHGV-2057562_35	PF13058	N/A	N/A	N/A	N/A
KOfam	UHGV-2057562_36	K06909	309.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2057562_36	phrog_3717	257.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-2057562_36	UniRef90_U2RK66	885.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-2057562_36	1256908.HMPREF0373_00486	885.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-2057562_36	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-2057562_36	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-2057562_36	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2057562_36	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2057562_36	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2057562_37	phrog_64	296.4	0	portal protein	head and packaging
UniRef90	UHGV-2057562_37	UniRef90_U2Q3Z0	972.0	0	Putative phage portal protein, SPP1 Gp6	N/A
eggNOG-mapper	UHGV-2057562_37	1256908.HMPREF0373_00485	972.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-2057562_37	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-2057562_37	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-2057562_38	phrog_595	44.8	0.000000000002	head maturation protease	head and packaging
eggNOG-mapper	UHGV-2057562_38	1256908.HMPREF0373_00484	217.0	0	Phage Mu protein F like protein	N/A
COG	UHGV-2057562_38	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-2057562_39	phrog_595	122.4	5.8e-36	head maturation protease	head and packaging
UniRef90	UHGV-2057562_39	UniRef90_U2PKN7	748.0	0	Phage protein F-like protein	N/A
eggNOG-mapper	UHGV-2057562_39	1256908.HMPREF0373_00484	748.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-2057562_39	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-2057562_39	COG2369	N/A	N/A	N/A	N/A
UniRef90	UHGV-2057562_41	UniRef90_UPI0013142281	216.0	0	retroviral-like aspartic protease family protein	N/A
Pfam	UHGV-2057562_41	PF13650	N/A	N/A	Aspartyl protease	Asp_protease_2
structural_annotation	UHGV-2057562_41	PF13650,TIGR02281,COG5550	N/A	N/A	N/A	N/A
PHROG	UHGV-2057562_42	phrog_918	91.4	5.4e-27	N/A	unknown function
UniRef90	UHGV-2057562_42	UniRef90_UPI001D092FF5	174.0	0	N/A	N/A
eggNOG-mapper	UHGV-2057562_42	1256908.HMPREF0373_00480	193.0	0	N/A	N/A
Pfam	UHGV-2057562_42	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-2057562_42	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-2057562_43	phrog_355	56.5	4.8e-16	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2057562_43	UniRef90_A0A415UCX1	156.0	0	N/A	N/A
eggNOG-mapper	UHGV-2057562_43	1256908.HMPREF0373_00479	198.0	0	N/A	N/A
structural_annotation	UHGV-2057562_43	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-2057562_44	phrog_194	71.7	1.3e-20	head scaffolding protein	head and packaging
UniRef90	UHGV-2057562_44	UniRef90_UPI001898447E	280.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-2057562_44	1256908.HMPREF0373_00477	411.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-2057562_44	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-2057562_44	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-2057562_45	phrog_544	211.9	0	major head protein	head and packaging
UniRef90	UHGV-2057562_45	UniRef90_A0A0D0SBF1	484.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-2057562_45	1256908.HMPREF0373_00476	656.0	0	N/A	N/A
NCBIFam	UHGV-2057562_45	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-2057562_45	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2057562_46	phrog_1236	160.6	0	head protein	head and packaging
eggNOG-mapper	UHGV-2057562_46	1256908.HMPREF0373_00475	344.0	0	N/A	N/A
structural_annotation	UHGV-2057562_46	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-2057562_47	phrog_1059	93.8	1.2e-27	head-tail adaptor	connector
UniRef90	UHGV-2057562_47	UniRef90_A0A416AFR5	145.0	6.31986e-43	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-2057562_47	1256908.HMPREF0373_00474	221.0	0	N/A	N/A
structural_annotation	UHGV-2057562_47	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2057562_48	phrog_5	42.8	0.000000000012	tail completion or Neck1 protein	connector
UniRef90	UHGV-2057562_48	UniRef90_UPI00189F42E9	160.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-2057562_48	1256908.HMPREF0373_00473	272.0	0	N/A	N/A
Pfam	UHGV-2057562_48	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-2057562_48	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2057562_49	1256908.HMPREF0373_00472	254.0	0	N/A	N/A
structural_annotation	UHGV-2057562_49	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-2057562_50	phrog_885	175.8	0	major tail protein	tail
eggNOG-mapper	UHGV-2057562_50	1256908.HMPREF0373_00471	419.0	0	N/A	N/A
structural_annotation	UHGV-2057562_50	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2057562_51	phrog_1021	93.3	2.3e-27	N/A	unknown function
eggNOG-mapper	UHGV-2057562_51	1256908.HMPREF0373_00470	289.0	0	N/A	N/A
UniRef90	UHGV-2057562_52	UniRef90_A0A0D0RHE1	65.1	0.000000000011	TWA4_scaffold00001, whole genome shotgun sequence	N/A
KOfam	UHGV-2057562_53	K20254	55.3	4e-16	PLIN4; perilipin-4	N/A
PHROG	UHGV-2057562_53	phrog_1272	403.2	0	tail length tape measure protein	tail
UniRef90	UHGV-2057562_53	UniRef90_U2Q4W9	1292.0	0	Phage tail tape measure protein, TP901 family	N/A
eggNOG-mapper	UHGV-2057562_53	1256908.HMPREF0373_00468	1292.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-2057562_53	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
Pfam	UHGV-2057562_53	PF04513	N/A	N/A	Baculovirus polyhedron envelope protein, PEP, C terminus	Baculo_PEP_C
NCBIFam	UHGV-2057562_53	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-2057562_53	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-2057562_53	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-2057562_54	phrog_33	41.8	0.000000000026	distal tail protein Dit	tail
UniRef90	UHGV-2057562_54	UniRef90_UPI0015709E93	147.0	1.25e-39	phage tail protein	N/A
eggNOG-mapper	UHGV-2057562_54	1256908.HMPREF0373_00467	533.0	0	N/A	N/A
structural_annotation	UHGV-2057562_54	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2057562	Yes	33,686	42	86	1
UHGV-0163451	No	11,763	42	30	1