vOTU vOTU-028528

vOTU: vOTU-028528

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-028528
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vOTU-028528
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0171558
Biosample ID	SAMN09781694
Genome length (bp)	25,945 bps
CheckV completeness	61.42% (Medium-quality)
CDS count	40
CDS density	89.08%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	213	Host agreement	96.24
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 61.42)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0171558_1	476272.RUMHYD_01776	95.5	9.26e-23	N/A	N/A
PHROG	UHGV-0171558_3	phrog_17977	45.2	0.0000000000014	N/A	unknown function
UniRef90	UHGV-0171558_3	UniRef90_A0A844DHJ8	236.0	0	Phage head closure protein	N/A
structural_annotation	UHGV-0171558_3	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0171558_4	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-0171558_5	phrog_885	61.9	9e-18	major tail protein	tail
eggNOG-mapper	UHGV-0171558_5	457396.CSBG_01054	57.8	0.000000181	Chitobiase/beta-hexosaminidase C-terminal domain	N/A
COG	UHGV-0171558_5	COG2273	N/A	N/A	Beta-glucanase, GH16 family	N/A
structural_annotation	UHGV-0171558_5	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0171558_8	phrog_28775	134.2	3e-40	tail length tape measure protein	tail
UniRef90	UHGV-0171558_8	UniRef90_A0A844DDD5	978.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0171558_8	883066.HMPREF9233_00516	126.0	1e-26	tape measure	N/A
Pfam	UHGV-0171558_8	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0171558_8	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0171558_8	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0171558_8	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
UniRef90	UHGV-0171558_9	UniRef90_R6QN45	87.4	3.8e-17	Putative phage tail component domain protein	N/A
eggNOG-mapper	UHGV-0171558_9	411490.ANACAC_00709	81.3	0.00000000000000125	phage tail	N/A
COG	UHGV-0171558_9	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0171558_9	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0171558_10	phrog_3558	198.3	0	tail protein	tail
UniRef90	UHGV-0171558_10	UniRef90_A0A3E2U3C8	171.0	3.96007e-42	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0171558_10	1235799.C818_04233	98.6	4.56e-19	Prophage endopeptidase tail	N/A
Pfam	UHGV-0171558_10	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0171558_10	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0171558_10	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
KOfam	UHGV-0171558_12	K07273	168.3	0	acm; lysozyme	N/A
PHROG	UHGV-0171558_12	phrog_291	133.0	2.9e-39	endolysin	lysis
UniRef90	UHGV-0171558_12	UniRef90_UPI001D0EE7D8	288.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-0171558_12	748224.HMPREF9436_00154	276.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0171558_12	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0171558_12	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0171558_12	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0171558_14	phrog_15303	83.9	1.5e-24	N/A	unknown function
KOfam	UHGV-0171558_16	K07741	60.2	7.8e-17	antB; anti-repressor protein	N/A
PHROG	UHGV-0171558_16	phrog_130	226.8	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0171558_16	UniRef90_A0A7U6KDQ3	204.0	0	Phage antirepressor protein	N/A
eggNOG-mapper	UHGV-0171558_16	662755.CRES_0897	191.0	0	Prophage antirepressor	N/A
Pfam	UHGV-0171558_16	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0171558_16	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0171558_16	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0171558_16	PF09669,PF03374,TIGR02681,COG3646,COG3645	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0171558_17	PF07342	N/A	N/A	N/A	N/A
UniRef90	UHGV-0171558_18	UniRef90_UPI000C7592F8	64.7	0.00000000000175	ribbon-helix-helix protein, CopG family	N/A
eggNOG-mapper	UHGV-0171558_18	663952.SDD27957_09060	57.8	0.000000000116	N/A	N/A
Pfam	UHGV-0171558_18	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-0171558_18	PF01402,NF041793,COG3905	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0171558_19	1160721.RBI_I00206	58.9	0.000000000141	N/A	N/A
structural_annotation	UHGV-0171558_19	PF19839,NF040976	N/A	N/A	N/A	N/A
PHROG	UHGV-0171558_20	phrog_3754	93.9	1.6e-27	N/A	unknown function
eggNOG-mapper	UHGV-0171558_20	1485543.JMME01000025_gene2462	102.0	5.62e-27	N/A	N/A
PHROG	UHGV-0171558_21	phrog_21718	111.3	8.2e-33	N/A	unknown function
eggNOG-mapper	UHGV-0171558_21	397290.C810_05210	75.1	0.00000000000000642	N/A	N/A
PHROG	UHGV-0171558_22	phrog_22984	83.5	1.4e-24	N/A	unknown function
PHROG	UHGV-0171558_23	phrog_3377	184.8	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0171558_23	632245.CLP_1610	159.0	2.8026e-45	N/A	N/A
PHROG	UHGV-0171558_24	phrog_16490	141.7	4.30058e-42	N/A	unknown function
eggNOG-mapper	UHGV-0171558_24	1408437.JNJN01000043_gene803	146.0	2.91001e-40	N/A	N/A
PHROG	UHGV-0171558_25	phrog_20016	203.4	0	N/A	unknown function
UniRef90	UHGV-0171558_25	UniRef90_A0A285PT46	195.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0171558_25	1226322.HMPREF1545_00077	180.0	0	N/A	N/A
structural_annotation	UHGV-0171558_25	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0171558_26	476272.RUMHYD_01772	52.8	0.00000134	N/A	N/A
structural_annotation	UHGV-0171558_26	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-0171558_28	K14059	116.1	5e-34	int; integrase	N/A
PHROG	UHGV-0171558_28	phrog_1	100.4	2.4e-29	integrase	integration and excision
UniRef90	UHGV-0171558_28	UniRef90_E2ZNV1	727.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-0171558_28	748224.HMPREF9436_03382	727.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0171558_28	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0171558_28	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0171558_28	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0171558_28	PF00589,PF14659,MF_01808,NF007246,COG4973	N/A	N/A	N/A	N/A
KOfam	UHGV-0171558_29	K15773	46.0	0.0000000000012	hipB; HTH-type transcriptional regulator / antitoxin HipB	N/A
PHROG	UHGV-0171558_29	phrog_2328	46.7	0.00000000000027	transcriptional repressor	transcription regulation
UniRef90	UHGV-0171558_29	UniRef90_A0A6N7TLT0	338.0	0	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0171558_29	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0171558_29	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0171558_32	321955.AAGP01000017_gene2211	52.8	0.00000378	N/A	N/A
structural_annotation	UHGV-0171558_32	PF16900,NF040991	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0171558_34	PF09202,MF_01819,NF041230,COG1321	N/A	N/A	N/A	N/A
PHROG	UHGV-0171558_35	phrog_8	48.3	0.00000000000024	transcriptional regulator	transcription regulation
UniRef90	UHGV-0171558_35	UniRef90_A0A8D9UHB1	77.8	2.68e-16	Repressor protein CI	N/A
eggNOG-mapper	UHGV-0171558_35	1378168.N510_01712	72.0	0.000000000000133	N/A	N/A
Pfam	UHGV-0171558_35	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0171558_35	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0171558_36	UniRef90_A0A1C7FQD9	73.6	0.00000000000000104	Transcriptional regulator	N/A
structural_annotation	UHGV-0171558_36	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0171558_39	K07741	99.8	6.5e-29	antB; anti-repressor protein	N/A
PHROG	UHGV-0171558_39	phrog_63	205.0	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0171558_39	UniRef90_A0A844D5R9	439.0	0	Phage regulatory protein/antirepressor Ant	N/A
eggNOG-mapper	UHGV-0171558_39	1423816.BACQ01000027_gene970	229.0	0	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-0171558_39	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-0171558_39	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
NCBIFam	UHGV-0171558_39	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0171558_39	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
structural_annotation	UHGV-0171558_39	PF03374,PF09669,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-0171558_40	phrog_4433	154.5	1.4013e-45	N/A	unknown function
eggNOG-mapper	UHGV-0171558_40	187303.BN69_1605	97.4	6.81e-22	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0171558_40	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0171558_40	NF000318	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0171558	Yes	25,945	51	61	1
UHGV-0194490	No	12,013	53	29	1