vOTU vOTU-028611

vOTU: vOTU-028611

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-028611
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-03066 → vGENUS-19728 → vOTU-028611
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0172521
Biosample ID	N/A
Genome length (bp)	30,416 bps
CheckV completeness	53.00% (Medium-quality)
CDS count	41
CDS density	84.15%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira	Total connections	346	Host agreement	91.04
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 53)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0172521_1	K22300	45.3	0.0000000000018	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0172521_1	phrog_8	62.1	1.3e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0172521_1	UniRef90_UPI001BBA85B7	133.0	4.77e-38	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0172521_1	1304866.K413DRAFT_0834	83.6	2.64e-19	PFAM helix-turn-helix domain protein	N/A
Pfam	UHGV-0172521_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0172521_1	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0172521_1	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0172521_3	phrog_1348	46.5	0.00000000000065	tail fiber protein	tail
UniRef90	UHGV-0172521_3	UniRef90_UPI001D07CA50	107.0	5.61e-25	acyl carrier protein	N/A
eggNOG-mapper	UHGV-0172521_3	1235799.C818_04237	194.0	0	N/A	N/A
structural_annotation	UHGV-0172521_3	PF14301	N/A	N/A	N/A	N/A
KOfam	UHGV-0172521_4	K07273	199.0	0	acm; lysozyme	N/A
PHROG	UHGV-0172521_4	phrog_291	143.5	1.80067e-42	endolysin	lysis
UniRef90	UHGV-0172521_4	UniRef90_UPI001D04C319	265.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-0172521_4	33035.JPJF01000043_gene994	232.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0172521_4	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0172521_4	PF07538	N/A	N/A	Clostridial hydrophobic W	ChW
COG	UHGV-0172521_4	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0172521_4	PF01183,NF007404,COG3757,COG5492	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0172521_5	1304866.K413DRAFT_0769	54.3	0.00000418	N/A	N/A
PHROG	UHGV-0172521_6	phrog_18725	73.1	4.6e-21	N/A	unknown function
eggNOG-mapper	UHGV-0172521_6	1235800.C819_00473	82.8	2.38e-17	N/A	N/A
PHROG	UHGV-0172521_7	phrog_13879	305.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0172521_7	742740.HMPREF9474_03516	536.0	0	N/A	N/A
structural_annotation	UHGV-0172521_7	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0172521_8	phrog_1194	53.0	0.0000000000000062	N/A	unknown function
eggNOG-mapper	UHGV-0172521_8	585501.HMPREF6123_0824	87.8	1.29e-20	N/A	N/A
structural_annotation	UHGV-0172521_8	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-0172521_9	K21473	45.1	0.0000000000016	ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]	N/A
PHROG	UHGV-0172521_9	phrog_1535	256.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0172521_9	UniRef90_C0BA73	640.0	0	Transglycosylase SLT domain protein	N/A
eggNOG-mapper	UHGV-0172521_9	397290.C810_01419	294.0	0	Transglycosylase SLT domain	N/A
Pfam	UHGV-0172521_9	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-0172521_9	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
structural_annotation	UHGV-0172521_9	NF012014	N/A	N/A	N/A	N/A
UniRef90	UHGV-0172521_11	UniRef90_UPI001D0975F6	98.6	2.47e-24	N/A	N/A
structural_annotation	UHGV-0172521_11	PF16478	N/A	N/A	N/A	N/A
UniRef90	UHGV-0172521_12	UniRef90_R7BGF5	91.7	2.23e-20	Phage tail protein	N/A
structural_annotation	UHGV-0172521_12	PF16463,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0172521_13	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-0172521_14	UniRef90_UPI001BBD4500	81.6	2.92e-16	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0172521_14	1232453.BAIF02000058_gene1631	157.0	0	N/A	N/A
AcrCatalog	UHGV-0172521_14	cluster_24841	160.0	0	NA	N/A
eggNOG-mapper	UHGV-0172521_15	1298920.KI911353_gene2656	53.5	0.000000501	N/A	N/A
structural_annotation	UHGV-0172521_15	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0172521_16	phrog_1129	74.0	1.4e-21	holin	lysis
UniRef90	UHGV-0172521_16	UniRef90_A0A416G2E0	143.0	5.49309e-43	Enolase	N/A
eggNOG-mapper	UHGV-0172521_16	411461.DORFOR_00721	108.0	6.88e-30	N/A	N/A
Pfam	UHGV-0172521_16	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0172521_16	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0172521_17	phrog_1863	41.3	0.000000000014	N/A	unknown function
eggNOG-mapper	UHGV-0172521_17	411468.CLOSCI_01509	65.5	0.00000000000217	N/A	N/A
eggNOG-mapper	UHGV-0172521_18	397290.C810_01402	69.7	0.0000000000000993	N/A	N/A
UniRef90	UHGV-0172521_19	UniRef90_A0A8D9UIY7	167.0	0	Rho termination factor	N/A
structural_annotation	UHGV-0172521_19	PF21169	N/A	N/A	N/A	N/A
PHROG	UHGV-0172521_20	phrog_544	276.9	0	major head protein	head and packaging
UniRef90	UHGV-0172521_20	UniRef90_A0A8D9PGL1	635.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-0172521_20	608534.GCWU000341_02293	331.0	0	N/A	N/A
NCBIFam	UHGV-0172521_20	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0172521_20	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0172521_22	phrog_64	135.6	2.69999e-40	portal protein	head and packaging
UniRef90	UHGV-0172521_22	UniRef90_A0A8D9PG58	1038.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0172521_22	397290.C810_01397	462.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0172521_22	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0172521_22	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-0172521_23	UniRef90_A0A8D9UIR9	142.0	2.74654e-43	RimK-related lysine biosynthesis protein	N/A
PHROG	UHGV-0172521_24	phrog_36	68.8	9.7e-20	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0172521_24	397290.C810_01391	192.0	0	N/A	N/A
structural_annotation	UHGV-0172521_24	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-0172521_25	phrog_38	145.0	5.29691e-43	terminase large subunit	head and packaging
UniRef90	UHGV-0172521_25	UniRef90_A0A8D9UIV2	980.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0172521_25	397290.C810_01390	690.0	0	chromosome segregation	N/A
Pfam	UHGV-0172521_25	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
COG	UHGV-0172521_25	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0172521_25	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0172521_26	PF04466	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0172521_27	469596.HMPREF9488_03215	71.6	0.0000000000000379	N/A	N/A
structural_annotation	UHGV-0172521_27	PF16475	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0172521_29	PF05225,COG2886	N/A	N/A	N/A	N/A
PHROG	UHGV-0172521_32	phrog_229	130.0	1.6e-38	MazG-like pyrophosphatase	other
UniRef90	UHGV-0172521_32	UniRef90_D7GNT7	141.0	1.82996e-41	MazG nucleotide pyrophosphohydrolase domain	N/A
eggNOG-mapper	UHGV-0172521_32	428125.CLOLEP_01391	124.0	2.04e-35	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-0172521_32	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-0172521_32	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-0172521_32	PF03819,MF_01020,NF001613,COG0140	N/A	N/A	N/A	N/A
KOfam	UHGV-0172521_33	K07741	77.4	4.6e-22	antB; anti-repressor protein	N/A
PHROG	UHGV-0172521_33	phrog_130	213.6	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0172521_33	UniRef90_UPI001BC68D0E	373.0	0	Phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0172521_33	796940.HMPREF9628_02201	214.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0172521_33	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0172521_33	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0172521_33	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0172521_33	PF02498,PF03374,TIGR02681,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-0172521_35	phrog_1233	86.5	3.1e-25	N/A	unknown function
UniRef90	UHGV-0172521_35	UniRef90_UPI001C39EFB9	139.0	2.68e-40	Dienelactone hydrolase family protein	N/A
eggNOG-mapper	UHGV-0172521_35	357809.Cphy_2967	111.0	6.42e-30	N/A	N/A
eggNOG-mapper	UHGV-0172521_36	658655.HMPREF0988_00895	130.0	5.94e-36	N/A	N/A
UniRef90	UHGV-0172521_37	UniRef90_W1I754	46.6	0.00000949	Uncultured bacterium plasmid pRGI00522	N/A
PHROG	UHGV-0172521_39	phrog_13890	51.1	0.000000000000016	N/A	unknown function
UniRef90	UHGV-0172521_39	UniRef90_A0A416MW54	119.0	5.11e-34	Arc family DNA-binding protein	N/A
Pfam	UHGV-0172521_39	PF03869	N/A	N/A	Arc-like DNA binding domain	Arc

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0172521	Yes	30,416	38	53	1
UHGV-0203533	No	22,786	38	40	1