vOTU vOTU-028817

vOTU: vOTU-028817

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-028817
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Angelakisella → Angelakisella sp900547385
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00236 → vGENUS-00162 → vOTU-028817
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Angelakisella
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0195325
Biosample ID	SAMN09781687
Genome length (bp)	17,908 bps
CheckV completeness	54.52% (Medium-quality)
CDS count	34
CDS density	92.92%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Angelakisella	Total connections	19	Host agreement	73.68
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Angelakisella → Angelakisella sp900547385	Total connections	17	Host agreement	70.59

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 54.52)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0195325_3	phrog_14970	190.3	0	N/A	unknown function
UniRef90	UHGV-0195325_3	UniRef90_UPI00123F00F5	177.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-0195325_3	428127.EUBDOL_01248	154.0	3.50325e-44	double-strand break repair protein	N/A
Pfam	UHGV-0195325_3	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-0195325_3	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0195325_3	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0195325_4	phrog_72	64.9	1.1e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0195325_4	UniRef90_UPI001F3F3E5C	145.0	3.41006e-41	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0195325_4	445972.ANACOL_01825	129.0	1.98e-35	N/A	N/A
structural_annotation	UHGV-0195325_4	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0195325_5	phrog_7566	54.0	0.0000000000000024	N/A	unknown function
eggNOG-mapper	UHGV-0195325_5	693746.OBV_24070	69.7	0.0000000000000683	N/A	N/A
KOfam	UHGV-0195325_6	K03111	128.6	7.3e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0195325_6	phrog_44	132.1	3.6e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0195325_6	UniRef90_UPI001E2A5A6F	235.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0195325_6	1235835.C814_01372	124.0	1.93e-34	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0195325_6	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0195325_6	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0195325_6	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0195325_6	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0195325_6	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0195325_7	phrog_16304	88.3	9e-26	N/A	unknown function
UniRef90	UHGV-0195325_7	UniRef90_UPI001E560709	417.0	0	N/A	N/A
eggNOG-mapper	UHGV-0195325_7	290402.Cbei_3733	61.6	0.0000000128	DnaD domain protein	N/A
Pfam	UHGV-0195325_7	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0195325_7	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0195325_7	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0195325_8	phrog_9804	164.4	0	N/A	unknown function
UniRef90	UHGV-0195325_8	UniRef90_UPI001E312ACC	363.0	0	replicative helicase loader/inhibitor	N/A
eggNOG-mapper	UHGV-0195325_8	1121344.JHZO01000003_gene981	178.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0195325_8	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0195325_8	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-0195325_9	K00390	48.0	1.2e-25	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0195325_9	phrog_424	107.5	2.7e-32	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0195325_9	UniRef90_UPI00189E7983	499.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0195325_9	1291050.JAGE01000002_gene3264	456.0	0	sulfate reduction	N/A
Pfam	UHGV-0195325_9	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0195325_9	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0195325_9	PF01507,MF_00064,NF010367,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-0195325_10	K01160	62.5	1.1e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0195325_10	phrog_34	67.1	2.9e-19	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0195325_10	UniRef90_A0A498CNH4	145.0	3.86758e-43	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0195325_10	477974.Daud_0813	51.6	0.00000254	N/A	N/A
Pfam	UHGV-0195325_10	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-0195325_10	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
UniRef90	UHGV-0195325_18	UniRef90_A0A8D9PDQ6	142.0	3.06884e-43	Restriction alleviation protein	N/A
Pfam	UHGV-0195325_18	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
dbAPIS	UHGV-0195325_18	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-0195325_18	TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-0195325_22	phrog_36	42.5	0.000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-0195325_22	UniRef90_UPI001D0837DD	114.0	7.11e-30	N/A	N/A
eggNOG-mapper	UHGV-0195325_22	428125.CLOLEP_01806	89.4	1.35e-20	N/A	N/A
structural_annotation	UHGV-0195325_22	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0195325_23	phrog_7339	103.4	1.9e-30	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0195325_23	UniRef90_A0A2V2GLL9	511.0	0	Metallophos_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0195325_23	1150474.JQJI01000006_gene784	92.8	1.39e-19	metallophosphoesterase	N/A
Pfam	UHGV-0195325_23	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-0195325_23	COG1408	N/A	N/A	Predicted phosphohydrolase, MPP superfamily	N/A
structural_annotation	UHGV-0195325_23	PF12850,MF_00325,NF003118,COG1311	N/A	N/A	N/A	N/A
PHROG	UHGV-0195325_24	phrog_2657	181.9	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-0195325_24	UniRef90_A0A7X5DZ93	307.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0195325_24	33035.JPJF01000043_gene993	290.0	0	N/A	N/A
Pfam	UHGV-0195325_24	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0195325_24	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0195325_24	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0195325_24	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-0195325_25	phrog_119	58.7	8.7e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0195325_25	UniRef90_A0A2V2GQ57	127.0	2.58e-37	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0195325_25	1226322.HMPREF1545_00111	92.4	4.67e-24	HNH nucleases	N/A
Pfam	UHGV-0195325_25	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0195325_25	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0195325_26	phrog_361	68.9	7.9e-20	terminase small subunit	head and packaging
UniRef90	UHGV-0195325_26	UniRef90_A0A1C6H6I9	169.0	0	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0195325_26	1329516.JPST01000017_gene431	49.3	0.00000861	Phage terminase, small subunit	N/A
Pfam	UHGV-0195325_26	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0195325_26	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0195325_26	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0195325_27	phrog_9	295.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0195325_27	UniRef90_A0A2V2GQ67	1200.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0195325_27	1226322.HMPREF1545_00113	882.0	0	Phage Terminase	N/A
Pfam	UHGV-0195325_27	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0195325_27	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0195325_27	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0195325_27	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0195325_28	phrog_12	174.2	0	portal protein	head and packaging
UniRef90	UHGV-0195325_28	UniRef90_A0A2V2GQD5	806.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0195325_28	1226322.HMPREF1545_00114	498.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0195325_28	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0195325_28	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0195325_28	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0195325_28	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0195325_29	K06904	149.0	3.50325e-44	N/A	N/A
PHROG	UHGV-0195325_29	phrog_80	173.1	0	head maturation protease	head and packaging
UniRef90	UHGV-0195325_29	UniRef90_A0A2V2GNJ3	382.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0195325_29	1226322.HMPREF1545_00115	245.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0195325_29	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0195325_29	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0195325_29	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0195325_29	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0195325_30	phrog_10	219.6	0	major head protein	head and packaging
UniRef90	UHGV-0195325_30	UniRef90_A0A2V2GRA2	1021.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0195325_30	1226322.HMPREF1545_00116	590.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0195325_30	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0195325_30	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0195325_30	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0195325_30	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0195325_30	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0195325_31	phrog_2550	85.9	2e-25	N/A	unknown function
UniRef90	UHGV-0195325_31	UniRef90_UPI001E35E63D	72.4	0.00000000000000914	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0195325_31	1226322.HMPREF1545_00117	108.0	6.16e-30	N/A	N/A
structural_annotation	UHGV-0195325_31	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0195325_32	phrog_1951	97.0	1.1e-28	head-tail adaptor	connector
UniRef90	UHGV-0195325_32	UniRef90_A0A2V2GSS5	206.0	0	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0195325_32	1226322.HMPREF1545_00118	105.0	5.13e-28	N/A	N/A
NCBIFam	UHGV-0195325_32	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0195325_32	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0195325_33	UniRef90_UPI00073E355A	164.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0195325_33	665956.HMPREF1032_02261	95.1	1.98e-23	N/A	N/A
Pfam	UHGV-0195325_33	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0195325_33	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
UniRef90	UHGV-0195325_34	UniRef90_A0A2X2WS24	59.3	0.00000000106	Phage-like protein	N/A
eggNOG-mapper	UHGV-0195325_34	1145276.T479_19945	56.2	0.0000000028	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0195325	Yes	17,908	52	55	1
UHGV-0175288	No	11,052	52	31	1