vOTU vOTU-028834

vOTU: vOTU-028834

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-028834
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00011 → vSUBFAM-02980 → vOTU-028834
Host lineage	Bacteria → Firmicutes
Host range breadth	Phylum
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0175962
Biosample ID	N/A
Genome length (bp)	28,588 bps
CheckV completeness	74.99% (Medium-quality)
CDS count	45
CDS density	93.19%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes	Total connections	3	Host agreement	66.67

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 74.99)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0175962_2	phrog_4729	153.9	0	N/A	unknown function
UniRef90	UHGV-0175962_2	UniRef90_A0A8E5K7D2	161.0	0	Putative Cas system-associated protein	N/A
eggNOG-mapper	UHGV-0175962_2	1229517.AMFD01000025_gene930	187.0	0	N/A	N/A
PHROG	UHGV-0175962_3	phrog_659	212.0	0	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0175962_3	UniRef90_UPI000C7A4314	222.0	0	N/A	N/A
eggNOG-mapper	UHGV-0175962_3	213777.R9R1G5_9CAUD	214.0	0	N/A	N/A
Pfam	UHGV-0175962_3	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0175962_3	PF06378,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0175962_4	phrog_1163	231.3	0	N/A	unknown function
UniRef90	UHGV-0175962_4	UniRef90_A0A091BRY9	334.0	0	Prephenate dehydrogenase	N/A
eggNOG-mapper	UHGV-0175962_4	1225805.J7KBV5_9CAUD	275.0	0	calcium ion binding	N/A
Pfam	UHGV-0175962_4	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
Pfam	UHGV-0175962_4	PF09524	N/A	N/A	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
NCBIFam	UHGV-0175962_4	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
structural_annotation	UHGV-0175962_4	PF09681,PF09524,TIGR01714,TIGR02220,COG5529	N/A	N/A	N/A	N/A
KOfam	UHGV-0175962_5	K02315	119.2	4.4e-35	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0175962_5	phrog_50	121.7	7.6e-36	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0175962_5	UniRef90_A0A6L2ZYN3	487.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0175962_5	1229517.AMFD01000023_gene1341	485.0	0	EVIDENCE BY HOMOLOGY BIO14.03 Phage related functions and prophages. 33 identical to the orf12 of the phage r1t. Functional equivalent to DnaC of E.coli or DnaI of B.subtilis, which are required for chromosomal replication	N/A
Pfam	UHGV-0175962_5	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0175962_5	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0175962_5	PF01695,MF_00377,NF006505,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0175962_7	phrog_2108	48.0	0.00000000000016	N/A	unknown function
KOfam	UHGV-0175962_8	K01160	60.2	6.2e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0175962_8	phrog_140	85.7	6.8e-25	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0175962_8	UniRef90_K2PT75	182.0	0	Phage resolvase	N/A
eggNOG-mapper	UHGV-0175962_8	1231377.C426_1966	182.0	0	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0175962_8	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0175962_8	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0175962_8	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0175962_9	phrog_1415	49.2	0.000000000000045	N/A	unknown function
UniRef90	UHGV-0175962_9	UniRef90_UPI001BCCDABF	167.0	0	helix-turn-helix domain-containing protein	N/A
PHROG	UHGV-0175962_10	phrog_3109	65.7	6.5e-19	N/A	unknown function
eggNOG-mapper	UHGV-0175962_10	416870.llmg_2122	59.7	0.0000000000906	N/A	N/A
Pfam	UHGV-0175962_10	PF06275	N/A	N/A	N/A	DUF1031
structural_annotation	UHGV-0175962_10	PF06275	N/A	N/A	N/A	N/A
KOfam	UHGV-0175962_11	K01520	115.3	6.7e-34	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0175962_11	phrog_135	134.6	5.30001e-40	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0175962_11	UniRef90_K2PTY6	240.0	0	Deoxyuridine 5'-triphosphate nucleotidohydrolase	N/A
eggNOG-mapper	UHGV-0175962_11	1231377.C426_1708	240.0	0	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	N/A
Pfam	UHGV-0175962_11	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0175962_11	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0175962_11	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0175962_11	PF00692,MF_00116,NF010561,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-0175962_12	phrog_23093	90.4	9e-27	N/A	unknown function
UniRef90	UHGV-0175962_12	UniRef90_UPI000A6B3D34	81.6	1.89e-19	N/A	N/A
PHROG	UHGV-0175962_14	phrog_7446	87.0	1.5e-25	N/A	unknown function
UniRef90	UHGV-0175962_14	UniRef90_T2F814	96.7	8.03e-25	Phage-related protein	N/A
PHROG	UHGV-0175962_15	phrog_121	73.2	3.2e-21	N/A	unknown function
UniRef90	UHGV-0175962_15	UniRef90_A0A5M9REY1	162.0	0	N/A	N/A
eggNOG-mapper	UHGV-0175962_15	1231377.C426_1970	130.0	2.33e-34	N/A	N/A
Pfam	UHGV-0175962_15	PF07852	N/A	N/A	N/A	DUF1642
structural_annotation	UHGV-0175962_15	PF07852	N/A	N/A	N/A	N/A
PHROG	UHGV-0175962_16	phrog_355	43.2	0.0000000000064	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0175962_16	UniRef90_UPI0018997E47	130.0	2.83e-37	N/A	N/A
structural_annotation	UHGV-0175962_16	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
KOfam	UHGV-0175962_17	K00571	173.9	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0175962_17	phrog_67	179.1	0	DNA methyltransferase	other
UniRef90	UHGV-0175962_17	UniRef90_UPI001F1D79DC	486.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0175962_17	1408823.AXUS01000035_gene1787	276.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-0175962_17	MTase_II_00037	175.3	0	Type II methyltransferase	RM
Pfam	UHGV-0175962_17	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0175962_17	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0175962_17	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
UniRef90	UHGV-0175962_18	UniRef90_UPI0013FD5769	140.0	4.25995e-42	helix-turn-helix transcriptional regulator	N/A
PHROG	UHGV-0175962_21	phrog_2316	78.4	1.1e-22	N/A	unknown function
UniRef90	UHGV-0175962_21	UniRef90_UPI0003F57BD1	112.0	1.91e-30	N/A	N/A
eggNOG-mapper	UHGV-0175962_21	1173745.A0A059TAL2_9CAUD	103.0	1.01e-27	N/A	N/A
Pfam	UHGV-0175962_21	PF16475	N/A	N/A	N/A	DUF5052
structural_annotation	UHGV-0175962_21	PF16475,MF_00436,NF033216,COG1923	N/A	N/A	N/A	N/A
PHROG	UHGV-0175962_22	phrog_2198	140.1	8.29989e-42	Alt-like transcription activator	transcription regulation
UniRef90	UHGV-0175962_22	UniRef90_A0A1I4I5A4	244.0	0	Phage transcriptional activator, RinA family	N/A
eggNOG-mapper	UHGV-0175962_22	1229517.AMFD01000018_gene191	154.0	0	N/A	N/A
Pfam	UHGV-0175962_22	PF05263	N/A	N/A	N/A	DUF722
NCBIFam	UHGV-0175962_22	TIGR01636.1	N/A	N/A	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-0175962_22	PF05263,MF_00674,TIGR01636,COG1595	N/A	N/A	N/A	N/A
KOfam	UHGV-0175962_23	K00571	132.1	6.1e-39	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0175962_23	phrog_498	444.5	0	DNA methyltransferase	other
UniRef90	UHGV-0175962_23	UniRef90_UPI00189A592B	615.0	0	DNA modification methylase	N/A
eggNOG-mapper	UHGV-0175962_23	226185.EF_2114	496.0	0	DNA methylase	N/A
PADLOC	UHGV-0175962_23	MTase_II_00015	386.9	0	Type II methyltransferase	RM
Pfam	UHGV-0175962_23	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0175962_23	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0175962_23	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0175962_23	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
UniRef90	UHGV-0175962_24	UniRef90_A0A345MPV9	124.0	4.51e-33	Terminase small subunit	N/A
COG	UHGV-0175962_24	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
KOfam	UHGV-0175962_25	K06909	137.5	1.3e-40	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0175962_25	phrog_5653	120.4	1e-35	terminase large subunit	head and packaging
UniRef90	UHGV-0175962_25	UniRef90_A0A1X9IGF9	800.0	0	Terminase_6C domain-containing protein	N/A
eggNOG-mapper	UHGV-0175962_25	1235798.C817_03482	429.0	0	Terminase-like family	N/A
Pfam	UHGV-0175962_25	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0175962_25	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0175962_25	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0175962_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0175962_25	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0175962_26	phrog_64	363.6	0	portal protein	head and packaging
UniRef90	UHGV-0175962_26	UniRef90_A0A7T4NJS3	809.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0175962_26	1158609.I586_00078	338.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0175962_26	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0175962_26	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0175962_26	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-0175962_27	phrog_115	278.5	0	minor head protein	head and packaging
UniRef90	UHGV-0175962_27	UniRef90_A0A1X9IGG3	594.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0175962_27	1139219.I569_01382	212.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0175962_27	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0175962_27	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0175962_27	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0175962_27	PF04233,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0175962_29	phrog_909	123.5	7.5e-37	major head protein	head and packaging
UniRef90	UHGV-0175962_29	UniRef90_Q037D6	111.0	1.27e-28	N/A	N/A
eggNOG-mapper	UHGV-0175962_29	543734.LCABL_13280	112.0	1.25e-30	N/A	N/A
PHROG	UHGV-0175962_30	phrog_29	228.8	0	major head protein	head and packaging
UniRef90	UHGV-0175962_30	UniRef90_UPI001073F540	542.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0175962_30	565664.EFXG_01167	264.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0175962_30	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0175962_30	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0175962_31	phrog_132	103.1	1.6e-30	head-tail adaptor	connector
UniRef90	UHGV-0175962_31	UniRef90_UPI0010730A93	148.0	2.52234e-44	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0175962_31	1423724.BAMM01000023_gene1909	92.8	4.76e-23	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0175962_31	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0175962_31	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-0175962_32	phrog_348	67.6	2e-19	minor head protein	head and packaging
eggNOG-mapper	UHGV-0175962_32	1034809.SLUG_08700	48.1	0.00000877	N/A	N/A
structural_annotation	UHGV-0175962_32	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0175962_33	phrog_5	48.1	0.00000000000033	tail completion or Neck1 protein	connector
UniRef90	UHGV-0175962_33	UniRef90_UPI00111124B6	94.0	1.18e-22	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0175962_33	139872.Q6SEC9_9CAUD	73.9	9.06e-16	exonuclease activity	N/A
Pfam	UHGV-0175962_33	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0175962_33	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0175962_33	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0175962_34	phrog_176	69.1	6.6e-20	tail terminator	connector
UniRef90	UHGV-0175962_34	UniRef90_UPI0010746E8A	180.0	0	N/A	N/A
structural_annotation	UHGV-0175962_34	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0175962_35	phrog_238	110.5	1.1e-32	major tail protein	tail
UniRef90	UHGV-0175962_35	UniRef90_A0A7T4NJV4	310.0	0	Phage major tail protein, TP901-1 family	N/A
eggNOG-mapper	UHGV-0175962_35	1605.Lani381_0866	89.0	1e-19	Phage tail tube protein	N/A
Pfam	UHGV-0175962_35	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
NCBIFam	UHGV-0175962_35	TIGR02126.1	N/A	N/A	phage major tail protein, TP901-1 family	N/A
structural_annotation	UHGV-0175962_35	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
Pfam	UHGV-0175962_36	PF12363	N/A	N/A	Phage tail assembly chaperone protein, TAC	Phage_TAC_12
structural_annotation	UHGV-0175962_36	PF12363	N/A	N/A	N/A	N/A
PHROG	UHGV-0175962_38	phrog_1686	887.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0175962_38	UniRef90_A0A1X9IGH8	1618.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0175962_38	999413.HMPREF1094_00207	209.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-0175962_38	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0175962_38	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0175962_38	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
UniRef90	UHGV-0175962_39	UniRef90_V7HYP3	84.0	1.67e-16	Putative prophage protein	N/A
eggNOG-mapper	UHGV-0175962_39	349123.Lreu23DRAFT_4199	95.1	2.23e-21	phage tail	N/A
COG	UHGV-0175962_39	COG4722	N/A	N/A	Phage-related protein YomH	N/A
PHROG	UHGV-0175962_40	phrog_3558	453.8	0	tail protein	tail
UniRef90	UHGV-0175962_40	UniRef90_A0A1X9IGI5	738.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0175962_40	930946.AEOP01000015_gene780	331.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0175962_40	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0175962_40	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0175962_40	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0175962_41	phrog_14448	119.0	2.4e-35	N/A	unknown function
UniRef90	UHGV-0175962_41	UniRef90_A0A1X9IGH6	485.0	0	BppU_IgG domain-containing protein	N/A
eggNOG-mapper	UHGV-0175962_41	930946.AEOP01000044_gene15	131.0	4.2e-34	N/A	N/A
Pfam	UHGV-0175962_41	PF18667	N/A	N/A	Baseplate upper protein immunoglobulin like domain	BppU_IgG
NCBIFam	UHGV-0175962_43	NF040910.1	N/A	N/A	CD1375 family protein	N/A
PHROG	UHGV-0175962_44	phrog_10512	40.8	0.000000000027	virion structural protein	head and packaging

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0175962	Yes	28,588	37	75	1
UHGV-0175645	No	21,131	37	55	1