vOTU vOTU-028958

vOTU: vOTU-028958

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-028958
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia → Faecousia sp900548795
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00020 → vGENUS-00117 → vOTU-028958
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0010245
Biosample ID	SAMEA4969173
Genome length (bp)	28,740 bps
CheckV completeness	68.71% (Medium-quality)
CDS count	45
CDS density	95.16%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	278	Host agreement	92.45
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia → Faecousia sp900548795	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 68.71)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0010245_3	phrog_4433	143.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0010245_3	394503.Ccel_3068	128.0	1.81e-34	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0010245_3	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0010245_3	NF007410	N/A	N/A	N/A	N/A
PHROG	UHGV-0010245_4	phrog_434	326.7	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0010245_4	UniRef90_A0A1Y4W4B5	418.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0010245_4	428125.CLOLEP_01823	338.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0010245_4	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0010245_4	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0010245_4	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0010245_4	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-0010245_5	K07455	280.0	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0010245_5	phrog_148	271.1	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0010245_5	UniRef90_A0A1Y4W4R3	385.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-0010245_5	428125.CLOLEP_01822	342.0	0	RecT family	N/A
Pfam	UHGV-0010245_5	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0010245_5	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0010245_5	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0010245_5	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-0010245_6	K03111	148.5	5.74532e-44	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0010245_6	phrog_44	148.9	2.24208e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0010245_6	UniRef90_R6LVK0	196.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0010245_6	1007096.BAGW01000007_gene1922	188.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0010245_6	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0010245_6	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0010245_6	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0010245_6	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0010245_6	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0010245_7	phrog_16304	54.4	0.000000000000002	N/A	unknown function
UniRef90	UHGV-0010245_7	UniRef90_A0A3D3Y5P0	221.0	0	N/A	N/A
Pfam	UHGV-0010245_7	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0010245_7	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0010245_7	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0010245_9	phrog_424	81.4	9.4e-24	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0010245_9	445972.ANACOL_01819	501.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
COG	UHGV-0010245_9	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0010245_9	PF01507,MF_00064,NF010367,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0010245_11	phrog_3136	142.7	9.59889e-43	N/A	unknown function
UniRef90	UHGV-0010245_11	UniRef90_A0A3D0HBD2	120.0	3.25e-31	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0010245_11	693746.OBV_25380	58.2	0.000000108	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-0010245_11	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0010245_11	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0010245_12	phrog_31107	83.8	1.2e-24	N/A	unknown function
PHROG	UHGV-0010245_13	phrog_38832	67.0	2.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-0010245_13	665956.HMPREF1032_00143	62.0	0.000000000242	N/A	N/A
PHROG	UHGV-0010245_16	phrog_1770	56.8	4e-16	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0010245_16	536233.CLO_1822	146.0	1.71939e-42	N/A	N/A
structural_annotation	UHGV-0010245_16	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0010245_18	742738.HMPREF9460_02503	93.6	1.19e-23	N/A	N/A
structural_annotation	UHGV-0010245_18	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0010245_19	PF10922,MF_00839	N/A	N/A	N/A	N/A
KOfam	UHGV-0010245_20	K07474	102.3	8e-30	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0010245_20	phrog_51	111.5	5.7e-33	terminase small subunit	head and packaging
UniRef90	UHGV-0010245_20	UniRef90_A0A396NMY4	130.0	1.98e-36	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0010245_20	476272.RUMHYD_01754	125.0	3.03e-35	Terminase small subunit	N/A
Pfam	UHGV-0010245_20	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0010245_20	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0010245_20	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0010245_21	K06909	127.2	1.6e-37	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0010245_21	phrog_10250	156.9	0	N/A	unknown function
UniRef90	UHGV-0010245_21	UniRef90_UPI0018AC3323	572.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0010245_21	476272.RUMHYD_01756	444.0	0	N/A	N/A
Pfam	UHGV-0010245_21	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0010245_21	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0010245_21	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0010245_21	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0010245_22	phrog_533	310.0	0	portal protein	head and packaging
UniRef90	UHGV-0010245_22	UniRef90_UPI00189D71DB	581.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-0010245_22	1232443.BAIA02000078_gene36	565.0	0	N/A	N/A
structural_annotation	UHGV-0010245_22	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0010245_24	phrog_8680	224.5	0	N/A	unknown function
UniRef90	UHGV-0010245_24	UniRef90_A0A3R6D7I3	258.0	0	N/A	N/A
eggNOG-mapper	UHGV-0010245_24	411470.RUMGNA_02208	233.0	0	N/A	N/A
Pfam	UHGV-0010245_24	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0010245_24	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0010245_25	phrog_581	258.6	0	minor head protein	head and packaging
UniRef90	UHGV-0010245_25	UniRef90_A0A1C5N7V1	413.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0010245_25	1226322.HMPREF1545_00046	369.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0010245_25	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0010245_25	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0010245_25	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0010245_27	phrog_194	98.3	8.3e-29	head scaffolding protein	head and packaging
UniRef90	UHGV-0010245_27	UniRef90_A0A2Z4Q9Y8	168.0	0	Minor structural protein	N/A
eggNOG-mapper	UHGV-0010245_27	1232443.BAIA02000078_gene31	147.0	1.5106e-42	N/A	N/A
Pfam	UHGV-0010245_27	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0010245_27	PF06810,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-0010245_28	phrog_909	58.6	7e-17	major head protein	head and packaging
UniRef90	UHGV-0010245_28	UniRef90_A0A0R1VNK8	55.5	0.00000101	N/A	N/A
eggNOG-mapper	UHGV-0010245_28	1497679.EP56_02915	60.5	0.00000000144	N/A	N/A
Pfam	UHGV-0010245_28	PF09479	N/A	N/A	Listeria-Bacteroides repeat domain (List_Bact_rpt)	Flg_new
structural_annotation	UHGV-0010245_28	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-0010245_29	phrog_29	175.4	0	major head protein	head and packaging
UniRef90	UHGV-0010245_29	UniRef90_UPI0004AE1FFD	406.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0010245_29	1232443.BAIA02000078_gene29	406.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0010245_29	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0010245_29	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0010245_30	phrog_541	90.1	1.6e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0010245_30	663278.Ethha_0095	55.1	0.0000000858	N/A	N/A
PHROG	UHGV-0010245_31	phrog_3366	102.5	3e-30	N/A	unknown function
eggNOG-mapper	UHGV-0010245_31	1226322.HMPREF1545_00053	175.0	0	N/A	N/A
structural_annotation	UHGV-0010245_31	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0010245_32	phrog_556	75.5	5.4e-22	minor head protein	head and packaging
UniRef90	UHGV-0010245_32	UniRef90_UPI00195E1497	214.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0010245_32	1226322.HMPREF1545_00054	167.0	0	Minor capsid protein	N/A
Pfam	UHGV-0010245_32	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0010245_32	PF11114,TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0010245_33	1232443.BAIA02000078_gene24	135.0	6.94e-39	N/A	N/A
structural_annotation	UHGV-0010245_33	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0010245_34	phrog_3099	59.4	6.7e-17	N/A	unknown function
eggNOG-mapper	UHGV-0010245_34	1235797.C816_04186	145.0	8.88003e-42	N/A	N/A
structural_annotation	UHGV-0010245_34	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0010245_35	phrog_11299	63.5	3.4e-18	N/A	unknown function
eggNOG-mapper	UHGV-0010245_35	693746.OBV_18160	204.0	0	N/A	N/A
structural_annotation	UHGV-0010245_35	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0010245_36	phrog_706	108.0	7.4e-32	N/A	unknown function
UniRef90	UHGV-0010245_36	UniRef90_UPI000682A80B	202.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0010245_36	1235797.C816_04184	193.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0010245_36	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0010245_36	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0010245_37	phrog_806	84.4	9.7e-25	N/A	unknown function
UniRef90	UHGV-0010245_37	UniRef90_UPI00137B5163	181.0	0	N/A	N/A
eggNOG-mapper	UHGV-0010245_37	397290.C810_05150	114.0	3.58e-28	N/A	N/A
Pfam	UHGV-0010245_37	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-0010245_37	PF11611,PF06832,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-0010245_38	phrog_1535	116.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0010245_38	UniRef90_A0A810PX76	236.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0010245_38	1235797.C816_04182	405.0	0	SLT domain	N/A
COG	UHGV-0010245_38	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0010245_38	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0010245_39	phrog_1194	65.8	5.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-0010245_39	411902.CLOBOL_00125	108.0	1.69e-28	N/A	N/A
structural_annotation	UHGV-0010245_39	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0010245_40	phrog_13879	232.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0010245_40	693746.OBV_18210	391.0	0	N/A	N/A
structural_annotation	UHGV-0010245_40	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0010245_41	PF10651,NF038186	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0010245_43	742733.HMPREF9469_01803	102.0	7.37e-24	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0010245_43	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-0010245_45	phrog_37900	50.8	3.4e-18	N/A	unknown function
UniRef90	UHGV-0010245_45	UniRef90_R5IRZ6	624.0	0	N/A	N/A
eggNOG-mapper	UHGV-0010245_45	1519439.JPJG01000060_gene1894	258.0	0	N/A	N/A
Pfam	UHGV-0010245_45	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0010245_45	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-0010245_45	PF19789,PF13620,NF033708	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0010245	Yes	28,740	55	69	1
UHGV-0177280	No	16,987	54	39	1