vOTU vOTU-028959

vOTU: vOTU-028959

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-028959
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00005 → vGENUS-00181 → vOTU-028959
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0212251
Biosample ID	N/A
Genome length (bp)	21,577 bps
CheckV completeness	51.37% (Medium-quality)
CDS count	44
CDS density	94.96%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	130	Host agreement	97.69
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 51.37)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0212251_1	phrog_22529	52.3	0.0000000000000076	N/A	unknown function
UniRef90	UHGV-0212251_1	UniRef90_A0A8D9UHA1	265.0	0	3D containing protein	N/A
eggNOG-mapper	UHGV-0212251_1	742733.HMPREF9469_00853	67.0	0.0000000000149	3D domain	N/A
Pfam	UHGV-0212251_1	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0212251_1	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-0212251_1	COG3584	N/A	N/A	N/A	N/A
UniRef90	UHGV-0212251_3	UniRef90_A0A8D9UH91	311.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0212251_3	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
structural_annotation	UHGV-0212251_3	PF01381,PF21715,NF041951,TIGR04176,COG1476,COG1654	N/A	N/A	N/A	N/A
UniRef90	UHGV-0212251_5	UniRef90_A0A845QLQ8	188.0	0	N/A	N/A
eggNOG-mapper	UHGV-0212251_5	33035.JPJF01000135_gene5082	114.0	5.68e-29	N/A	N/A
Pfam	UHGV-0212251_5	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0212251_5	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
UniRef90	UHGV-0212251_6	UniRef90_B0PAM4	155.0	1.82169e-44	YqaJ domain-containing protein	N/A
structural_annotation	UHGV-0212251_6	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0212251_7	phrog_72	59.4	3e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0212251_7	UniRef90_A0A8D9PDS2	337.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0212251_7	445972.ANACOL_01825	132.0	7.11e-37	N/A	N/A
structural_annotation	UHGV-0212251_7	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0212251_9	phrog_7566	94.9	4.7e-28	N/A	unknown function
UniRef90	UHGV-0212251_9	UniRef90_A0A8D9UHC0	144.0	3.57331e-43	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-0212251_9	1007096.BAGW01000031_gene114	139.0	7.64969e-42	N/A	N/A
KOfam	UHGV-0212251_10	K03111	143.7	1.80067e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0212251_10	phrog_44	140.4	1.10002e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0212251_10	UniRef90_G4L1H2	187.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0212251_10	693746.OBV_19910	187.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0212251_10	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0212251_10	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0212251_10	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0212251_10	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0212251_10	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0212251_12	phrog_15768	95.0	1.2e-28	N/A	unknown function
UniRef90	UHGV-0212251_12	UniRef90_A0A8D9PDU3	114.0	2.7e-28	N/A	N/A
eggNOG-mapper	UHGV-0212251_12	445970.ALIPUT_02689	78.2	0.00000000000000965	DNA-binding transcription factor activity	N/A
AcrCatalog	UHGV-0212251_12	cluster_38323	78.6	1.27e-19	NA	N/A
Pfam	UHGV-0212251_12	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0212251_12	COG2188	N/A	N/A	DNA-binding transcriptional regulator, GntR family	N/A
structural_annotation	UHGV-0212251_12	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0212251_13	phrog_9804	69.6	4.7e-20	N/A	unknown function
UniRef90	UHGV-0212251_13	UniRef90_A0A8D9PDS1	256.0	0	Replisome organizer	N/A
eggNOG-mapper	UHGV-0212251_13	903814.ELI_3550	83.2	4.61e-18	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0212251_13	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0212251_13	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0212251_15	phrog_190	99.0	4.2e-29	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0212251_15	UniRef90_A0A8D9PDD6	227.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-0212251_15	1121105.ATXL01000006_gene1363	75.9	0.00000000000000174	N/A	N/A
Pfam	UHGV-0212251_15	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0212251_15	PF06356	N/A	N/A	N/A	N/A
KOfam	UHGV-0212251_16	K00571	101.4	5e-30	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0212251_16	phrog_23224	95.6	1.9e-32	DNA methyltransferase	other
UniRef90	UHGV-0212251_16	UniRef90_UPI001331804A	270.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0212251_16	1268240.ATFI01000007_gene431	207.0	0	DNA methylase	N/A
PADLOC	UHGV-0212251_16	MTase_II_00172	132.5	3.6e-39	Type II methyltransferase	RM
Pfam	UHGV-0212251_16	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0212251_16	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0212251_16	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-0212251_18	K00558	120.8	2.79993e-41	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0212251_18	phrog_116	146.5	0	DNA methyltransferase	other
UniRef90	UHGV-0212251_18	UniRef90_A0A1C5KYC3	313.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0212251_18	718252.FP2_16350	311.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0212251_18	oMTase_00004	148.6	0	orphan methyltransferase	RM
Pfam	UHGV-0212251_18	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
Pfam	UHGV-0212251_18	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
COG	UHGV-0212251_18	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0212251_19	phrog_111	69.6	4.4e-20	DNA methyltransferase	other
UniRef90	UHGV-0212251_19	UniRef90_A0A315ZVT2	125.0	5.17e-35	Phage N-6-adenine-methyltransferase	N/A
eggNOG-mapper	UHGV-0212251_19	445972.ANACOL_03344	114.0	2.45e-31	DNA N-6-adenine-methyltransferase (Dam)	N/A
PADLOC	UHGV-0212251_19	oMTase_00015	90.4	3.3e-26	orphan methyltransferase	RM
Pfam	UHGV-0212251_19	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
structural_annotation	UHGV-0212251_19	PF05869,TIGR01712,COG2242	N/A	N/A	N/A	N/A
PHROG	UHGV-0212251_21	phrog_1384	135.1	4.5e-40	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-0212251_21	665956.HMPREF1032_03086	275.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0212251_21	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
UniRef90	UHGV-0212251_25	UniRef90_UPI001D08B1AD	75.5	0.00000000000000215	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-0212251_28	PF06003,MF_01354,TIGR00739,COG5475	N/A	N/A	N/A	N/A
KOfam	UHGV-0212251_29	K22299	48.1	0.00000000000028	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0212251_29	phrog_8	67.1	3.6e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0212251_29	UniRef90_A0A8D9PDC4	154.0	0	Repressor protein	N/A
eggNOG-mapper	UHGV-0212251_29	1226322.HMPREF1545_00039	79.3	1.19e-18	sequence-specific DNA binding	N/A
Pfam	UHGV-0212251_29	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0212251_29	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0212251_29	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0212251_30	UniRef90_UPI0009523D83	171.0	0	helix-turn-helix domain containing protein	N/A
eggNOG-mapper	UHGV-0212251_30	1226322.HMPREF1545_00042	159.0	0	N/A	N/A
structural_annotation	UHGV-0212251_30	PF13542	N/A	N/A	N/A	N/A
KOfam	UHGV-0212251_31	K06909	113.2	2.8e-33	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0212251_31	phrog_2	118.2	1.1e-34	terminase large subunit	head and packaging
UniRef90	UHGV-0212251_31	UniRef90_A0A3D3Y0N9	424.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0212251_31	1226322.HMPREF1545_00043	394.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0212251_31	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0212251_31	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0212251_31	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0212251_31	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0212251_32	phrog_533	378.3	0	portal protein	head and packaging
UniRef90	UHGV-0212251_32	UniRef90_A0A1C5N775	590.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0212251_32	1226322.HMPREF1545_00044	550.0	0	N/A	N/A
Pfam	UHGV-0212251_32	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0212251_32	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0212251_34	phrog_581	281.7	0	minor head protein	head and packaging
UniRef90	UHGV-0212251_34	UniRef90_UPI001D080D49	541.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0212251_34	1226322.HMPREF1545_00046	369.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0212251_34	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0212251_34	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0212251_34	PF06152	N/A	N/A	N/A	N/A
Pfam	UHGV-0212251_37	PF08681	N/A	N/A	N/A	DUF1778
UniRef90	UHGV-0212251_38	UniRef90_A0A6B9SU02	65.9	0.000000000839	Fibronectin autolysin	N/A
structural_annotation	UHGV-0212251_38	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0212251_39	phrog_544	190.4	0	major head protein	head and packaging
UniRef90	UHGV-0212251_39	UniRef90_A0A810PZM2	496.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0212251_39	1347392.CCEZ01000005_gene1236	289.0	0	N/A	N/A
structural_annotation	UHGV-0212251_39	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0212251_40	phrog_541	108.0	5.4e-32	head-tail adaptor	connector
eggNOG-mapper	UHGV-0212251_40	411470.RUMGNA_02220	67.8	0.00000000000145	N/A	N/A
PHROG	UHGV-0212251_41	phrog_3366	87.5	1.4e-25	N/A	unknown function
eggNOG-mapper	UHGV-0212251_41	1226322.HMPREF1545_00053	142.0	1.46001e-41	N/A	N/A
structural_annotation	UHGV-0212251_41	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0212251_42	phrog_556	79.2	4.3e-23	minor head protein	head and packaging
UniRef90	UHGV-0212251_42	UniRef90_UPI00195E1497	186.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0212251_42	1226322.HMPREF1545_00054	155.0	0	Minor capsid protein	N/A
Pfam	UHGV-0212251_42	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0212251_42	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0212251_43	phrog_3266	61.8	9.9e-18	tail completion	connector
UniRef90	UHGV-0212251_43	UniRef90_A0A2Z4QA01	123.0	8.73e-34	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0212251_43	1232443.BAIA02000078_gene24	186.0	0	N/A	N/A
structural_annotation	UHGV-0212251_43	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0212251_44	phrog_3099	56.1	7.6e-16	N/A	unknown function
eggNOG-mapper	UHGV-0212251_44	1226322.HMPREF1545_00056	170.0	0	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0212251	Yes	21,577	54	51	1
UHGV-0177281	No	14,702	53	35	1