vOTU vOTU-029002

vOTU: vOTU-029002

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-029002
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00569 → vGENUS-00424 → vOTU-029002
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → KLE1615 → KLE1615 sp900066985
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0178171
Biosample ID	SAMN09781752
Genome length (bp)	28,557 bps
CheckV completeness	66.60% (Medium-quality)
CDS count	44
CDS density	96.23%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → KLE1615 → KLE1615 sp900066985	Total connections	71	Host agreement	85.92
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 66.6)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
Pfam	UHGV-0178171_1	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
PHROG	UHGV-0178171_2	phrog_1067	299.6	0	minor head protein	head and packaging
UniRef90	UHGV-0178171_2	UniRef90_A0A7G9G6Y3	399.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0178171_2	1123263.AUKY01000068_gene489	313.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0178171_2	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-0178171_2	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-0178171_2	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0178171_2	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0178171_2	PF14594,PF13884,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0178171_3	phrog_33	83.4	5.2e-24	distal tail protein Dit	tail
UniRef90	UHGV-0178171_3	UniRef90_A0A1C5W6B6	197.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0178171_3	1160721.RBI_I01575	164.0	0	Phage tail protein	N/A
COG	UHGV-0178171_3	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0178171_3	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0178171_4	phrog_1272	238.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0178171_4	UniRef90_A0A3A9C035	152.0	9.17e-34	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0178171_4	641112.ACOK01000073_gene2904	254.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0178171_4	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0178171_4	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0178171_4	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-0178171_7	phrog_885	80.5	2.1e-23	major tail protein	tail
UniRef90	UHGV-0178171_7	UniRef90_A0A843J9F0	172.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0178171_7	1504822.CCNO01000012_gene492	201.0	0	N/A	N/A
structural_annotation	UHGV-0178171_7	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0178171_8	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0178171_9	phrog_1233	82.7	5.8e-24	N/A	unknown function
UniRef90	UHGV-0178171_9	UniRef90_UPI001C39EFB9	84.7	8.32e-19	Dienelactone hydrolase family protein	N/A
eggNOG-mapper	UHGV-0178171_9	665950.HMPREF1025_01361	92.0	7.48e-22	N/A	N/A
structural_annotation	UHGV-0178171_9	PF13058	N/A	N/A	N/A	N/A
PHROG	UHGV-0178171_10	phrog_17977	64.5	1.5e-18	N/A	unknown function
UniRef90	UHGV-0178171_10	UniRef90_A0A285PT57	140.0	6.26002e-41	Phage head-tail joining protein	N/A
Pfam	UHGV-0178171_10	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-0178171_10	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0178171_12	phrog_247	274.0	0	major head protein	head and packaging
UniRef90	UHGV-0178171_12	UniRef90_UPI001E4E7823	343.0	0	phage coat protein	N/A
eggNOG-mapper	UHGV-0178171_12	445335.CBN_1379	325.0	0	N/A	N/A
COG	UHGV-0178171_12	COG1106	N/A	N/A	ATPase/GTPase, AAA15 family	N/A
structural_annotation	UHGV-0178171_12	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0178171_13	phrog_194	41.0	0.000000000035	head scaffolding protein	head and packaging
structural_annotation	UHGV-0178171_13	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0178171_14	phrog_5	73.3	5e-21	tail completion or Neck1 protein	connector
UniRef90	UHGV-0178171_14	UniRef90_A0A7X5E1T2	159.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0178171_14	1280685.AUKC01000004_gene1630	117.0	7.53e-32	N/A	N/A
Pfam	UHGV-0178171_14	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0178171_14	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0178171_14	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0178171_15	phrog_595	116.3	4.6e-34	head maturation protease	head and packaging
UniRef90	UHGV-0178171_15	UniRef90_A0A285PUG1	295.0	0	Phage head morphogenesis domain	N/A
eggNOG-mapper	UHGV-0178171_15	1111135.HMPREF1248_0663	201.0	0	cell adhesion	N/A
Pfam	UHGV-0178171_15	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0178171_15	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0178171_15	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0178171_15	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0178171_16	phrog_64	171.3	0	portal protein	head and packaging
UniRef90	UHGV-0178171_16	UniRef90_A0A856HZB4	456.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0178171_16	673376.F2VHW1_9CAUD	224.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0178171_16	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0178171_16	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0178171_17	K06909	135.6	5.5e-40	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0178171_17	phrog_10250	183.5	0	N/A	unknown function
UniRef90	UHGV-0178171_17	UniRef90_UPI00059A8066	593.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0178171_17	903814.ELI_3215	578.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0178171_17	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0178171_17	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0178171_17	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0178171_17	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0178171_17	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0178171_18	K07474	118.2	1.4e-34	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0178171_18	phrog_2606	327.7	0	terminase small subunit	head and packaging
UniRef90	UHGV-0178171_18	UniRef90_UPI001C10A749	333.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0178171_18	1304866.K413DRAFT_3033	307.0	0	terminase, small subunit	N/A
Pfam	UHGV-0178171_18	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
Pfam	UHGV-0178171_18	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0178171_18	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0178171_18	PF03592,PF10668,NF040601,COG3728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0178171_20	PF05225,NF040595	N/A	N/A	N/A	N/A
PHROG	UHGV-0178171_21	phrog_7566	97.7	7.3e-29	N/A	unknown function
eggNOG-mapper	UHGV-0178171_21	411471.SUBVAR_05830	84.3	6.9e-20	N/A	N/A
KOfam	UHGV-0178171_24	K00558	44.5	0.0000000000017	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0178171_24	phrog_116	59.5	4.7e-17	DNA methyltransferase	other
UniRef90	UHGV-0178171_24	UniRef90_UPI000A03C287	72.4	0.00000000000000412	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0178171_24	1141106.CAIB01000145_gene1289	70.1	0.000000000000286	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0178171_24	oMTase_00023	55.2	0.0000000000000019	orphan methyltransferase	RM
Pfam	UHGV-0178171_24	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0178171_24	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-0178171_26	K00558	183.8	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0178171_26	phrog_116	191.2	0	DNA methyltransferase	other
UniRef90	UHGV-0178171_26	UniRef90_D7GQK9	369.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-0178171_26	1391647.AVSV01000003_gene1798	213.0	0	PFAM C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0178171_26	MTase_II_00058	222.0	0	Type II methyltransferase	RM
Pfam	UHGV-0178171_26	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0178171_26	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0178171_26	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0178171_26	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0178171_27	phrog_9804	113.5	2.1e-33	N/A	unknown function
UniRef90	UHGV-0178171_27	UniRef90_A0A1C5T9U7	118.0	4.87e-30	Loader and inhibitor of phage G40P	N/A
eggNOG-mapper	UHGV-0178171_27	697281.Mahau_0086	99.4	1.38e-23	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0178171_27	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
PHROG	UHGV-0178171_28	phrog_10469	227.9	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178171_28	UniRef90_A0A3R6NS16	264.0	0	Phage_rep_org_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0178171_28	1415774.U728_3774	185.0	0	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
Pfam	UHGV-0178171_28	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0178171_28	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-0178171_28	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0178171_28	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
PHROG	UHGV-0178171_30	phrog_72	60.2	3.9e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178171_30	UniRef90_A0A285PU94	96.3	9.63e-22	Recombinase NinB	N/A
eggNOG-mapper	UHGV-0178171_30	1304866.K413DRAFT_1197	123.0	2.6e-33	N/A	N/A
structural_annotation	UHGV-0178171_30	PF05772,NF007281	N/A	N/A	N/A	N/A
KOfam	UHGV-0178171_31	K03111	127.7	1.6e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0178171_31	phrog_44	129.3	3.4e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178171_31	UniRef90_A0A176U568	206.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0178171_31	796942.HMPREF9623_02068	198.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0178171_31	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0178171_31	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0178171_31	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0178171_31	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0178171_31	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0178171_32	991905.SL003B_3762	57.4	0.00000000245	N/A	N/A
PHROG	UHGV-0178171_33	phrog_14970	242.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0178171_33	397291.C804_03856	197.0	0	double-strand break repair protein	N/A
Pfam	UHGV-0178171_33	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-0178171_33	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0178171_33	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
UniRef90	UHGV-0178171_35	UniRef90_UPI001319C207	94.0	2.03e-21	endonuclease NucS	N/A
Pfam	UHGV-0178171_35	PF14281	N/A	N/A	PD-(D/E)XK nuclease superfamily	PDDEXK_4
PHROG	UHGV-0178171_37	phrog_253	62.3	1.1e-17	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178171_37	UniRef90_A0A359EUH8	86.3	2.54e-20	Integrase (Fragment)	N/A
eggNOG-mapper	UHGV-0178171_37	699218.HMPREF0889_0310	80.5	3.2e-18	Siphovirus Gp157	N/A
Pfam	UHGV-0178171_37	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0178171_37	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-0178171_41	phrog_463	193.6	0	anti-repressor	transcription regulation
eggNOG-mapper	UHGV-0178171_41	596329.HMPREF0631_1352	168.0	0	BRO family, N-terminal domain protein	N/A
Pfam	UHGV-0178171_41	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0178171_41	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-0178171_41	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0178171_41	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-0178171_44	phrog_4433	62.0	1e-17	N/A	unknown function
eggNOG-mapper	UHGV-0178171_44	665950.HMPREF1025_01373	76.6	0.00000000000000396	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0178171_44	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0178171	Yes	28,557	43	67	1
UHGV-0200559	No	21,259	43	50	1