vOTU vOTU-029097

vOTU: vOTU-029097

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-029097
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A
Taxonomy (UHGV)	vFAM-00154 → vSUBFAM-01343 → vGENUS-12907 → vOTU-029097
Host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A → Phascolarctobacterium_A succinatutens
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1496781
Biosample ID	SAMEA4545347
Genome length (bp)	25,536 bps
CheckV completeness	57.26% (Medium-quality)
CDS count	38
CDS density	94.36%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A → Phascolarctobacterium_A succinatutens	Total connections	23	Host agreement	91.3
PHIST-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A	Total connections	6	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 57.26)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1496781_1	phrog_186	46.9	0.00000000000043	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1496781_1	UniRef90_A0A533SQ43	58.2	0.0000000245	DnaD domain protein (Fragment)	N/A
Pfam	UHGV-1496781_1	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-1496781_1	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-1496781_1	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
eggNOG-mapper	UHGV-1496781_4	665956.HMPREF1032_02663	80.1	5.85e-17	N/A	N/A
PHROG	UHGV-1496781_5	phrog_9403	61.9	8.8e-18	N/A	unknown function
Pfam	UHGV-1496781_5	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
KOfam	UHGV-1496781_8	K03111	141.6	7.79963e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1496781_8	phrog_44	154.0	0	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1496781_8	UniRef90_E8LE33	200.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1496781_8	626939.HMPREF9443_01150	200.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1496781_8	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1496781_8	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1496781_8	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1496781_8	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1496781_8	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1496781_9	phrog_190	152.2	1.4013e-45	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1496781_9	UniRef90_A0A845R040	129.0	2.29e-36	N/A	N/A
eggNOG-mapper	UHGV-1496781_9	1347392.CCEZ01000043_gene417	117.0	2.63e-32	N/A	N/A
Pfam	UHGV-1496781_9	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1496781_9	PF06356,MF_04160,NF033179	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1496781_10	246194.CHY_1683	51.2	0.00000466	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-1496781_10	PF05263,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-1496781_11	K03497	63.2	5.8e-18	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1496781_11	phrog_620	176.4	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1496781_11	UniRef90_UPI000FD68CF7	248.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1496781_11	1416334.X2CXX2_9CAUD	236.0	0	N-methyltransferase activity	N/A
PADLOC	UHGV-1496781_11	MTase_II_00015	91.0	2.1e-26	Type II methyltransferase	RM
Pfam	UHGV-1496781_11	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
structural_annotation	UHGV-1496781_11	PF02195,TIGR00180,COG5119	N/A	N/A	N/A	N/A
UniRef90	UHGV-1496781_12	UniRef90_A0A1Y4VGH5	215.0	0	Radical SAM core domain-containing protein	N/A
eggNOG-mapper	UHGV-1496781_12	411459.RUMOBE_01047	186.0	0	Radical SAM superfamily	N/A
COG	UHGV-1496781_12	COG0535	N/A	N/A	Radical SAM superfamily maturase, SkfB/NifB/PqqE family	N/A
COG	UHGV-1496781_13	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-1496781_13	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-1496781_14	phrog_30251	635.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-1496781_14	UniRef90_UPI001F2335B1	620.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1496781_14	1123489.AUAN01000010_gene364	582.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-1496781_14	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1496781_14	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1496781_14	PF17289,PF03237,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-1496781_15	phrog_145	140.7	2.29953e-42	portal protein	head and packaging
UniRef90	UHGV-1496781_15	UniRef90_R6WQ48	608.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1496781_15	1232428.CAVO010000021_gene806	313.0	0	N/A	N/A
structural_annotation	UHGV-1496781_15	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1496781_16	phrog_1657	95.5	8.7e-32	head morphogenesis	head and packaging
UniRef90	UHGV-1496781_16	UniRef90_R6AE12	389.0	0	TNT domain-containing protein	N/A
eggNOG-mapper	UHGV-1496781_16	1232428.CAVO010000021_gene805	276.0	0	N/A	N/A
structural_annotation	UHGV-1496781_16	PF04233,TIGR01641	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1496781_17	888055.HMPREF9015_01922	54.7	0.00000179	Phage Mu protein F like protein	N/A
COG	UHGV-1496781_17	COG2369	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1496781_19	1280706.AUJE01000003_gene2260	100.0	2.6e-23	N/A	N/A
structural_annotation	UHGV-1496781_19	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1496781_20	phrog_422	231.2	0	major head protein	head and packaging
UniRef90	UHGV-1496781_20	UniRef90_R6WWZ7	379.0	0	Gp7	N/A
eggNOG-mapper	UHGV-1496781_20	1430331.EP10_10365	327.0	0	N/A	N/A
NCBIFam	UHGV-1496781_20	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1496781_20	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1496781_22	phrog_5	47.3	0.00000000000048	tail completion or Neck1 protein	connector
UniRef90	UHGV-1496781_22	UniRef90_F9MMJ2	96.3	1.85e-22	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-1496781_22	568816.Acin_1234	110.0	1e-28	N/A	N/A
structural_annotation	UHGV-1496781_22	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1496781_23	1111454.HMPREF1250_1049	76.6	2.63e-16	N/A	N/A
UniRef90	UHGV-1496781_24	UniRef90_R6WK09	84.0	2.84e-18	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1496781_24	1111454.HMPREF1250_1050	55.5	0.0000000611	N/A	N/A
structural_annotation	UHGV-1496781_24	PF08873,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1496781_25	phrog_1407	97.9	8.1e-29	major tail protein	tail
UniRef90	UHGV-1496781_25	UniRef90_A0A380NJ51	141.0	7.74e-40	Predicted secreted protein	N/A
eggNOG-mapper	UHGV-1496781_25	568816.Acin_1231	132.0	6.79e-37	Phage tail tube protein	N/A
Pfam	UHGV-1496781_25	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
COG	UHGV-1496781_25	COG5437	N/A	N/A	Phage tail protein, TP901-1 family	N/A
structural_annotation	UHGV-1496781_25	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1496781_26	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1496781_28	phrog_12798	135.5	0	N/A	unknown function
UniRef90	UHGV-1496781_28	UniRef90_R6AN74	366.0	0	Tape measure domain protein	N/A
eggNOG-mapper	UHGV-1496781_28	1273103.NM10_06751	171.0	1.07e-40	tape measure	N/A
Pfam	UHGV-1496781_28	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1496781_28	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1496781_28	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-1496781_28	PF20155,MF_04138,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1496781_29	phrog_33	73.5	4e-21	distal tail protein Dit	tail
UniRef90	UHGV-1496781_29	UniRef90_UPI0015588CAB	290.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-1496781_29	568816.Acin_1906	166.0	0	Phage tail protein	N/A
structural_annotation	UHGV-1496781_29	PF20753,PF19512,TIGR01633,COG4722	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1496781_30	568816.Acin_1905	400.0	0	N/A	N/A
structural_annotation	UHGV-1496781_30	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1496781_31	phrog_13336	52.8	1.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-1496781_31	2754.EH55_13265	98.2	1.3e-20	N/A	N/A
PHROG	UHGV-1496781_32	phrog_1348	54.3	0.0000000000000025	tail fiber protein	tail
structural_annotation	UHGV-1496781_32	PF14301	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1496781_33	665956.HMPREF1032_00696	65.5	0.00000000000251	N/A	N/A
structural_annotation	UHGV-1496781_33	PF16407,NF032891,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-1496781_34	phrog_31538	45.2	0.0000000000016	N/A	unknown function
eggNOG-mapper	UHGV-1496781_34	428125.CLOLEP_01433	72.8	0.00000000000000122	N/A	N/A
PHROG	UHGV-1496781_35	phrog_13589	199.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1496781_35	742733.HMPREF9469_05009	255.0	0	N/A	N/A
UniRef90	UHGV-1496781_36	UniRef90_A0A4Q5C8S3	57.0	0.00000001	Histidine kinase	N/A
eggNOG-mapper	UHGV-1496781_36	742733.HMPREF9469_05008	55.5	0.00000000676	N/A	N/A
eggNOG-mapper	UHGV-1496781_38	765869.BDW_04645	56.2	0.000000286	prophage protein Bartonella henselae str. Houston-1 gi 49237922 emb CAF27125.1	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1496781	Yes	25,536	48	57	1
UHGV-0114865	No	23,872	47	53	1