vOTU vOTU-029131

vOTU: vOTU-029131

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-029131
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00017 → vOTU-029131
Host lineage
Host range breadth
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0180179
Biosample ID	SAMN09781791
Genome length (bp)	35,592 bps
CheckV completeness	59.09% (Medium-quality)
CDS count	42
CDS density	93.96%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 59.09)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0180179_1	phrog_4259	119.4	1.4e-35	N/A	unknown function
UniRef90	UHGV-0180179_1	UniRef90_D4P7B9	82.4	5.63e-18	Gp008	N/A
eggNOG-mapper	UHGV-0180179_1	691965.D4P7B9_9CAUD	82.4	9.44e-19	N/A	N/A
PHROG	UHGV-0180179_2	phrog_4321	173.5	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0180179_2	742733.HMPREF9469_05036	147.0	1.23314e-43	N/A	N/A
PHROG	UHGV-0180179_4	phrog_4247	111.7	3.2e-33	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0180179_4	428125.CLOLEP_01407	88.6	2.88e-21	N/A	N/A
PHROG	UHGV-0180179_5	phrog_3754	72.4	7.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-0180179_5	476272.RUMHYD_01764	104.0	1.22e-27	N/A	N/A
PHROG	UHGV-0180179_6	phrog_21718	47.9	0.00000000000021	N/A	unknown function
PHROG	UHGV-0180179_8	phrog_16490	67.3	5.3e-23	N/A	unknown function
eggNOG-mapper	UHGV-0180179_8	1485543.JMME01000025_gene2459	128.0	1.5e-32	N/A	N/A
PHROG	UHGV-0180179_9	phrog_20016	147.4	3.64338e-44	N/A	unknown function
UniRef90	UHGV-0180179_9	UniRef90_A0A285PT46	121.0	1.54e-32	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0180179_9	1235790.C805_00062	127.0	1.01e-35	N/A	N/A
structural_annotation	UHGV-0180179_9	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0180179_11	phrog_199	64.8	1e-18	holin	lysis
UniRef90	UHGV-0180179_11	UniRef90_A0A1H6XM70	85.5	1.71e-18	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-0180179_11	1087481.AGFX01000029_gene1119	62.0	0.000000000574	Bacteriophage holin family	N/A
Pfam	UHGV-0180179_11	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0180179_11	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0180179_11	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0180179_11	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0180179_12	phrog_32444	47.1	0.00000000000048	N/A	unknown function
eggNOG-mapper	UHGV-0180179_12	478749.BRYFOR_08525	53.1	0.00000285	N/A	N/A
PHROG	UHGV-0180179_13	phrog_9	239.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0180179_13	UniRef90_A0A173Z354	811.0	0	Phage terminase-like protein, large subunit	N/A
eggNOG-mapper	UHGV-0180179_13	428125.CLOLEP_01409	813.0	0	Phage Terminase	N/A
Pfam	UHGV-0180179_13	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0180179_13	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0180179_13	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0180179_13	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0180179_14	phrog_12	119.6	2.3e-35	portal protein	head and packaging
UniRef90	UHGV-0180179_14	UniRef90_A0A7X5EBN7	424.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0180179_14	742740.HMPREF9474_02271	412.0	0	Phage portal protein	N/A
Pfam	UHGV-0180179_14	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-0180179_14	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0180179_15	K06904	63.6	1.5e-18	N/A	N/A
PHROG	UHGV-0180179_15	phrog_3270	652.1	0	head maturation protease	head and packaging
UniRef90	UHGV-0180179_15	UniRef90_UPI001967B1BC	537.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0180179_15	691965.D4P7D6_9CAUD	400.0	0	peptidase activity	N/A
Pfam	UHGV-0180179_15	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
structural_annotation	UHGV-0180179_15	PF04586,PF06673,TIGR01543,TIGR01554,COG3740,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0180179_16	phrog_4270	114.0	6.2e-34	N/A	unknown function
eggNOG-mapper	UHGV-0180179_16	742740.HMPREF9474_02268	107.0	9.29e-29	N/A	N/A
structural_annotation	UHGV-0180179_16	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0180179_17	UniRef90_A0A5J6D7U9	72.0	0.0000000000000294	Tail terminator	N/A
eggNOG-mapper	UHGV-0180179_17	665956.HMPREF1032_00678	80.1	2.96e-18	N/A	N/A
structural_annotation	UHGV-0180179_17	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0180179_18	phrog_2645	267.3	0	major tail protein	tail
UniRef90	UHGV-0180179_18	UniRef90_A0A2U8UI58	236.0	0	Major tail protein	N/A
eggNOG-mapper	UHGV-0180179_18	742740.HMPREF9474_02267	214.0	0	N/A	N/A
structural_annotation	UHGV-0180179_18	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0180179_19	phrog_4282	144.6	4.69435e-43	N/A	unknown function
eggNOG-mapper	UHGV-0180179_19	478749.BRYFOR_08517	105.0	1.31e-26	N/A	N/A
PHROG	UHGV-0180179_20	phrog_4338	197.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0180179_20	742733.HMPREF9469_05023	152.0	1.12104e-44	N/A	N/A
KOfam	UHGV-0180179_21	K07273	144.8	7.39886e-43	acm; lysozyme	N/A
PHROG	UHGV-0180179_21	phrog_291	129.8	2.6e-38	endolysin	lysis
UniRef90	UHGV-0180179_21	UniRef90_D4CBH7	173.0	0	Glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-0180179_21	879305.HMPREF9290_1609	123.0	2.34e-28	hydrolase family 25	N/A
Pfam	UHGV-0180179_21	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0180179_21	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-0180179_21	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
UniRef90	UHGV-0180179_22	UniRef90_A0A3E2V879	124.0	3.14e-34	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0180179_22	428125.CLOLEP_01421	115.0	2.31e-31	N/A	N/A
Pfam	UHGV-0180179_22	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0180179_22	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0180179_23	phrog_4372	414.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0180179_23	UniRef90_A0A351RFM5	264.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0180179_23	428125.CLOLEP_01422	360.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0180179_23	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0180179_23	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0180179_23	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0180179_23	PF20155,COG3941	N/A	N/A	N/A	N/A
UniRef90	UHGV-0180179_24	UniRef90_UPI00040E71D3	90.1	3.53e-18	phage tail family protein	N/A
eggNOG-mapper	UHGV-0180179_24	938289.CAJN020000007_gene305	91.3	2.75e-19	N/A	N/A
structural_annotation	UHGV-0180179_24	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0180179_25	phrog_3558	214.6	0	tail protein	tail
UniRef90	UHGV-0180179_25	UniRef90_A0A6N9PF82	161.0	1.46996e-42	Prophage_tail domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0180179_25	904144.AEJD01000006_gene571	139.0	1e-33	Prophage endopeptidase tail	N/A
Pfam	UHGV-0180179_25	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0180179_25	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0180179_25	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0180179_25	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0180179_27	phrog_5555	94.2	1e-27	tail protein	tail
UniRef90	UHGV-0180179_27	UniRef90_UPI00189B3A54	124.0	2.61e-27	phage tail protein	N/A
eggNOG-mapper	UHGV-0180179_27	411460.RUMTOR_00484	151.0	5.74e-37	Prophage endopeptidase tail	N/A
COG	UHGV-0180179_27	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0180179_32	phrog_2152	93.7	1.7e-27	N/A	unknown function
UniRef90	UHGV-0180179_32	UniRef90_UPI00189C67CC	64.7	0.0000000116	N/A	N/A
eggNOG-mapper	UHGV-0180179_32	665956.HMPREF1032_00634	62.0	0.0000000142	N/A	N/A
Pfam	UHGV-0180179_32	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0180179_32	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-0180179_35	phrog_2152	132.3	3.2e-39	N/A	unknown function
UniRef90	UHGV-0180179_35	UniRef90_UPI00137B24BF	129.0	5.51e-33	N/A	N/A
eggNOG-mapper	UHGV-0180179_35	742740.HMPREF9474_02314	124.0	1.06e-31	N/A	N/A
Pfam	UHGV-0180179_35	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0180179_35	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-0180179_36	phrog_4079	105.8	2.8e-31	N/A	unknown function
eggNOG-mapper	UHGV-0180179_36	691965.D4P7H8_9CAUD	67.8	0.0000000000237	N/A	N/A
PHROG	UHGV-0180179_38	phrog_2152	144.9	4.30199e-43	N/A	unknown function
UniRef90	UHGV-0180179_38	UniRef90_UPI0019578B0D	111.0	6.77e-25	N/A	N/A
eggNOG-mapper	UHGV-0180179_38	478749.BRYFOR_08565	105.0	1.16e-23	N/A	N/A
Pfam	UHGV-0180179_38	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0180179_38	PF19880	N/A	N/A	N/A	N/A
KOfam	UHGV-0180179_42	K02336	45.3	0.00000000000039	polB; DNA polymerase II [EC:2.7.7.7]	N/A
PHROG	UHGV-0180179_42	phrog_4210	1608.7	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0180179_42	UniRef90_A0A7X5IUT2	1185.0	0	SF3 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-0180179_42	411460.RUMTOR_02036	1163.0	0	N/A	N/A
Pfam	UHGV-0180179_42	PF19263	N/A	N/A	N/A	DUF5906
structural_annotation	UHGV-0180179_42	PF00136,PF05272,PF10991,PF09250,MF_04100,MF_00016,NF011296,TIGR00592,COG3378,COG0417	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0180179	Yes	35,592	39	59	1
UHGV-0213189	No	25,101	40	42	1