vOTU vOTU-029216

vOTU: vOTU-029216

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-029216
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00117 → vGENUS-00172 → vOTU-029216
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira → Lachnospira eligens_A
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0181253
Biosample ID	SAMEA2580098
Genome length (bp)	33,100 bps
CheckV completeness	86.90% (Medium-quality)
CDS count	49
CDS density	92.44%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira → Lachnospira eligens_A	Total connections	1327	Host agreement	70.99
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira → Lachnospira eligens_A	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 86.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0181253_1	NF037954	N/A	N/A	N/A	N/A
PHROG	UHGV-0181253_7	phrog_3584	164.9	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0181253_7	641107.CDLVIII_1314	152.0	1.53022e-42	N/A	N/A
structural_annotation	UHGV-0181253_7	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-0181253_8	K03469	70.2	4.2e-20	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0181253_8	phrog_531	65.7	7.4e-19	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0181253_8	UniRef90_A0A413YU26	274.0	0	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0181253_8	1121447.JONL01000002_gene2134	76.3	0.00000000000000163	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-0181253_8	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0181253_8	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0181253_8	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0181253_9	PF19962,NF011863	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0181253_10	1280698.AUJS01000007_gene1016	157.0	0	N/A	N/A
PHROG	UHGV-0181253_11	phrog_4433	71.4	5.2e-26	N/A	unknown function
eggNOG-mapper	UHGV-0181253_11	742733.HMPREF9469_00220	127.0	1.7e-34	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0181253_11	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0181253_11	PF12120,NF000318	N/A	N/A	N/A	N/A
PHROG	UHGV-0181253_12	phrog_8470	175.1	0	N/A	unknown function
UniRef90	UHGV-0181253_12	UniRef90_UPI0018999714	668.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0181253_12	742733.HMPREF9469_00219	378.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0181253_12	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0181253_12	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0181253_13	phrog_15077	91.2	2e-26	N/A	unknown function
UniRef90	UHGV-0181253_13	UniRef90_A0A3A6HZA9	205.0	0	N/A	N/A
eggNOG-mapper	UHGV-0181253_13	483218.BACPEC_01165	226.0	0	N/A	N/A
structural_annotation	UHGV-0181253_13	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0181253_17	phrog_10714	56.7	2.9e-16	N/A	unknown function
eggNOG-mapper	UHGV-0181253_17	537007.BLAHAN_05460	52.8	0.000000119	N/A	N/A
PHROG	UHGV-0181253_18	phrog_20593	50.6	0.000000000000022	N/A	unknown function
AcrCatalog	UHGV-0181253_18	cluster_27421	38.1	0.000000999	NA	N/A
PHROG	UHGV-0181253_19	phrog_874	182.3	0	N/A	unknown function
UniRef90	UHGV-0181253_19	UniRef90_A0A6N7W7Q7	204.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0181253_19	411468.CLOSCI_00298	188.0	0	N/A	N/A
structural_annotation	UHGV-0181253_19	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
COG	UHGV-0181253_21	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
PHROG	UHGV-0181253_22	phrog_36	66.1	6.5e-19	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0181253_22	397290.C810_01391	102.0	9.36e-26	N/A	N/A
structural_annotation	UHGV-0181253_22	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-0181253_23	phrog_2538	88.0	8.9e-26	terminase small subunit	head and packaging
UniRef90	UHGV-0181253_23	UniRef90_A0A1C5UE81	150.0	1.54143e-44	HTH_Tnp_1_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0181253_23	320843.Q4ZBS0_9CAUD	62.4	0.000000000104	DNA packaging	N/A
Pfam	UHGV-0181253_23	PF13022	N/A	N/A	Helix-turn-helix of insertion element transposase	HTH_Tnp_1_2
structural_annotation	UHGV-0181253_23	PF13022	N/A	N/A	N/A	N/A
KOfam	UHGV-0181253_24	K06909	95.0	9.5e-28	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0181253_24	phrog_2	71.5	1.8e-20	terminase large subunit	head and packaging
UniRef90	UHGV-0181253_24	UniRef90_A0A413YU24	939.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0181253_24	1391647.AVSV01000003_gene1802	520.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0181253_24	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0181253_24	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0181253_24	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0181253_25	phrog_533	288.1	0	portal protein	head and packaging
UniRef90	UHGV-0181253_25	UniRef90_A0A413YU90	937.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0181253_25	33035.JPJF01000093_gene2257	545.0	0	N/A	N/A
structural_annotation	UHGV-0181253_25	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0181253_26	phrog_581	244.8	0	minor head protein	head and packaging
UniRef90	UHGV-0181253_26	UniRef90_A0A1C5VPR8	991.0	0	ATPase involved in DNA repair	N/A
eggNOG-mapper	UHGV-0181253_26	33035.JPJF01000093_gene2255	447.0	0	N/A	N/A
Pfam	UHGV-0181253_26	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0181253_26	PF21814	N/A	N/A	N/A	DUF6883
COG	UHGV-0181253_26	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0181253_26	PF06152	N/A	N/A	N/A	N/A
UniRef90	UHGV-0181253_27	UniRef90_F5RJP5	48.1	0.00000403	Chaperonin	N/A
eggNOG-mapper	UHGV-0181253_27	1200557.JHWV01000022_gene2459	52.8	0.0000000124	N/A	N/A
structural_annotation	UHGV-0181253_27	PF02699,MF_00369,TIGR00739,COG1862	N/A	N/A	N/A	N/A
PHROG	UHGV-0181253_28	phrog_2303	140.0	1.70006e-41	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0181253_28	483218.BACPEC_01156	135.0	1.84e-36	N/A	N/A
PHROG	UHGV-0181253_29	phrog_422	260.0	0	major head protein	head and packaging
UniRef90	UHGV-0181253_29	UniRef90_A0A3D5M0U8	503.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0181253_29	663278.Ethha_1589	378.0	0	N/A	N/A
structural_annotation	UHGV-0181253_29	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0181253_30	phrog_541	68.4	1e-19	head-tail adaptor	connector
eggNOG-mapper	UHGV-0181253_30	1304866.K413DRAFT_0783	147.0	2.8026e-44	N/A	N/A
PHROG	UHGV-0181253_31	phrog_8710	125.6	1.8e-37	N/A	unknown function
eggNOG-mapper	UHGV-0181253_31	742740.HMPREF9474_03508	123.0	4.07e-35	N/A	N/A
structural_annotation	UHGV-0181253_31	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0181253_32	742740.HMPREF9474_03509	127.0	1.4e-35	N/A	N/A
PHROG	UHGV-0181253_33	phrog_2595	79.3	4.1e-23	head-tail connector protein	connector
UniRef90	UHGV-0181253_33	UniRef90_UPI001D068DAC	137.0	8.45e-39	minor capsid protein	N/A
eggNOG-mapper	UHGV-0181253_33	742740.HMPREF9474_03510	125.0	7.13e-35	N/A	N/A
Pfam	UHGV-0181253_33	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0181253_33	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0181253_34	phrog_820	117.7	7e-35	major tail protein	tail
UniRef90	UHGV-0181253_34	UniRef90_T3DDR1	171.0	0	Phage major tail 2 family protein	N/A
eggNOG-mapper	UHGV-0181253_34	1151292.QEW_2426	171.0	0	N/A	N/A
structural_annotation	UHGV-0181253_34	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0181253_35	phrog_8300	67.4	1.9e-19	N/A	unknown function
eggNOG-mapper	UHGV-0181253_35	1151292.QEW_2425	60.8	0.000000000154	N/A	N/A
structural_annotation	UHGV-0181253_35	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-0181253_36	phrog_8355	88.1	4.7e-26	N/A	unknown function
UniRef90	UHGV-0181253_36	UniRef90_UPI0006BBA9AA	110.0	1.75e-29	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0181253_36	1151292.QEW_2424	105.0	5.07e-29	N/A	N/A
PHROG	UHGV-0181253_37	phrog_1535	280.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0181253_37	UniRef90_R6TDK7	349.0	0	Phage-related protein-like protein	N/A
eggNOG-mapper	UHGV-0181253_37	33035.JPJF01000093_gene2243	345.0	0	phage tail tape measure protein	N/A
COG	UHGV-0181253_37	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0181253_37	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0181253_38	phrog_1194	82.4	4.6e-24	N/A	unknown function
eggNOG-mapper	UHGV-0181253_38	33035.JPJF01000093_gene2242	155.0	0	N/A	N/A
structural_annotation	UHGV-0181253_38	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0181253_39	phrog_1401	66.1	5e-19	N/A	unknown function
UniRef90	UHGV-0181253_39	UniRef90_UPI00129D2DCF	66.2	0.0000000000275	N/A	N/A
eggNOG-mapper	UHGV-0181253_39	1294142.CINTURNW_1705	59.3	0.00000000216	N/A	N/A
structural_annotation	UHGV-0181253_39	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0181253_40	phrog_6616	168.0	0	tail protein	tail
UniRef90	UHGV-0181253_40	UniRef90_A0A356C4L7	758.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0181253_40	1232453.BAIF02000058_gene1641	276.0	0	Phage minor structural protein	N/A
COG	UHGV-0181253_40	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0181253_40	PF16466,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0181253_41	phrog_2566	45.8	0.00000000000093	N/A	unknown function
eggNOG-mapper	UHGV-0181253_44	536227.CcarbDRAFT_4479	53.5	0.000000277	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0181253_44	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
COG	UHGV-0181253_44	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
PHROG	UHGV-0181253_45	phrog_199	72.2	6.3e-21	holin	lysis
UniRef90	UHGV-0181253_45	UniRef90_A0A3B8UJ75	240.0	0	Holin	N/A
eggNOG-mapper	UHGV-0181253_45	483218.BACPEC_01140	214.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0181253_45	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0181253_45	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0181253_45	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0181253_45	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0181253_46	K02395	47.4	0.00000000000023	flgJ; peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-0181253_46	phrog_3513	55.2	7.3e-16	endolysin	lysis
UniRef90	UHGV-0181253_46	UniRef90_R5ZWS5	498.0	0	Peptidoglycan hydrolase	N/A
eggNOG-mapper	UHGV-0181253_46	1423724.BAMM01000042_gene2173	60.1	0.000000117	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-0181253_46	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
Pfam	UHGV-0181253_46	PF08230	N/A	N/A	CW_7 repeat	CW_7
Pfam	UHGV-0181253_46	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0181253_46	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-0181253_46	PF08230,NF004974,COG1705	N/A	N/A	N/A	N/A
KOfam	UHGV-0181253_47	K07339	41.3	0.000000000026	hicA; mRNA interferase HicA [EC:3.1.-.-]	N/A
PHROG	UHGV-0181253_47	phrog_353	82.0	4.1e-24	toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0181253_47	UniRef90_A0A1H3VXF8	95.9	6.47e-25	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	N/A
eggNOG-mapper	UHGV-0181253_47	1408311.JNJM01000002_gene1308	95.9	1.09e-25	HicA toxin of bacterial toxin-antitoxin,	N/A
Pfam	UHGV-0181253_47	PF07927	N/A	N/A	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
COG	UHGV-0181253_47	COG1724	N/A	N/A	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	N/A
structural_annotation	UHGV-0181253_47	PF07927,COG1724	N/A	N/A	N/A	N/A
KOfam	UHGV-0181253_48	K18843	69.8	6.2e-20	hicB; antitoxin HicB	N/A
PHROG	UHGV-0181253_48	phrog_497	87.1	3e-25	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0181253_48	UniRef90_A0A413P9Z2	259.0	0	HicB family protein	N/A
eggNOG-mapper	UHGV-0181253_48	1408311.JNJM01000002_gene1307	179.0	0	HicB_like antitoxin of bacterial toxin-antitoxin system	N/A
Pfam	UHGV-0181253_48	PF15919	N/A	N/A	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
COG	UHGV-0181253_48	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
structural_annotation	UHGV-0181253_48	PF15919,COG1598	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0181253_49	1121344.JHZO01000001_gene435	50.1	0.0000000405	PFAM Manganese containing catalase	N/A
COG	UHGV-0181253_49	COG3546	N/A	N/A	Mn-containing catalase (includes spore coat protein CotJC)	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0181253	Yes	33,100	38	87	1
UHGV-1995498	No	17,409	38	46	1