vOTU vOTU-029217

vOTU: vOTU-029217

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-029217
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00206 → vOTU-029217
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia
Host range breadth	Genus
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0213153
Biosample ID	SAMN10407346
Genome length (bp)	32,778 bps
CheckV completeness	73.56% (Medium-quality)
CDS count	58
CDS density	85.08%
tRNA count	1
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia	Total connections	34	Host agreement	94.12
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 73.56)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0213153_1	phrog_1535	126.7	1.4e-37	tail length tape measure protein	tail
UniRef90	UHGV-0213153_1	UniRef90_W1I523	207.0	0	Uncultured bacterium extrachromosomal DNA RGI02278	N/A
eggNOG-mapper	UHGV-0213153_1	1121866.AUGK01000003_gene1437	253.0	0	phage tail tape measure protein	N/A
COG	UHGV-0213153_1	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
structural_annotation	UHGV-0213153_1	PF05537,TIGR01760	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0213153_2	1211844.CBLM010000023_gene987	64.7	0.00000000000593	N/A	N/A
UniRef90	UHGV-0213153_3	UniRef90_UPI001A9BEE46	87.8	2.73e-20	N/A	N/A
eggNOG-mapper	UHGV-0213153_3	1123263.AUKY01000015_gene1618	72.8	0.0000000000000036	N/A	N/A
Pfam	UHGV-0213153_3	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0213153_3	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-0213153_4	phrog_158	49.7	0.000000000000068	major tail protein	tail
UniRef90	UHGV-0213153_4	UniRef90_A0A1C6L0H9	206.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0213153_4	1232453.BAIF02000058_gene1634	92.8	2.4e-22	N/A	N/A
structural_annotation	UHGV-0213153_4	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0213153_5	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0213153_6	1298920.KI911353_gene2654	74.7	0.0000000000000171	N/A	N/A
eggNOG-mapper	UHGV-0213153_7	1121866.AUGK01000003_gene1432	77.4	1.82e-16	N/A	N/A
UniRef90	UHGV-0213153_8	UniRef90_UPI00164E20D5	149.0	5.60519e-45	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0213153_8	1298920.KI911353_gene2658	54.7	0.0000000307	N/A	N/A
Pfam	UHGV-0213153_8	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0213153_8	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0213153_10	phrog_247	266.9	0	major head protein	head and packaging
UniRef90	UHGV-0213153_10	UniRef90_A0A3D0LY55	383.0	0	Coat protein	N/A
eggNOG-mapper	UHGV-0213153_10	1304866.K413DRAFT_3038	300.0	0	N/A	N/A
Pfam	UHGV-0213153_10	PF20036	N/A	N/A	Major capsid protein 13-like	Gp13-like
structural_annotation	UHGV-0213153_10	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0213153_12	phrog_64	205.1	0	portal protein	head and packaging
UniRef90	UHGV-0213153_12	UniRef90_UPI001C02F349	696.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0213153_12	1123263.AUKY01000015_gene1609	421.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0213153_12	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0213153_12	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0213153_13	phrog_38	180.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0213153_13	UniRef90_A0A810QA10	642.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0213153_13	1298920.KI911353_gene2682	467.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-0213153_13	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0213153_13	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0213153_13	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0213153_14	phrog_1233	83.6	2.6e-24	N/A	unknown function
UniRef90	UHGV-0213153_14	UniRef90_UPI001C39EFB9	110.0	9.1e-29	Dienelactone hydrolase family protein	N/A
eggNOG-mapper	UHGV-0213153_14	357809.Cphy_2967	111.0	6.18e-30	N/A	N/A
UniRef90	UHGV-0213153_18	UniRef90_A0A1I1AQ89	57.4	0.00000000344	Cro/C1-type HTH DNA-binding domain-containing protein	N/A
structural_annotation	UHGV-0213153_18	PF20075,TIGR03070,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0213153_21	phrog_7028	50.4	0.000000000000012	N/A	unknown function
PHROG	UHGV-0213153_23	phrog_606	49.5	0.000000000000043	terminase small subunit	head and packaging
UniRef90	UHGV-0213153_23	UniRef90_UPI001D08D6B6	167.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0213153_23	1280663.ATVR01000009_gene2143	69.7	0.00000000000152	N/A	N/A
Pfam	UHGV-0213153_23	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0213153_23	PF16677	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0213153_28	PF09889,MF_00649,COG4068	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0213153_32	748224.HMPREF9436_03069	61.6	0.000000000761	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0213153_32	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0213153_33	phrog_757	51.9	0.000000000000012	DNA methyltransferase	other
UniRef90	UHGV-0213153_33	UniRef90_A0A7J2R6L5	69.3	0.0000000000000152	DNA cytosine methyltransferase (Fragment)	N/A
eggNOG-mapper	UHGV-0213153_33	748224.HMPREF9436_03069	101.0	3.88e-26	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0213153_33	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-0213153_34	K00390	85.2	5.3e-25	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0213153_34	phrog_424	117.8	3.4e-35	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0213153_34	UniRef90_A0A1Y4LU27	390.0	0	Adenylyl-sulfate reductase	N/A
eggNOG-mapper	UHGV-0213153_34	1408437.JNJN01000032_gene2312	352.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-0213153_34	BrxP_00001	63.1	1.8e-18	BrxP	BREX
Pfam	UHGV-0213153_34	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0213153_34	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0213153_34	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0213153_36	phrog_4433	84.4	4.8e-29	N/A	unknown function
eggNOG-mapper	UHGV-0213153_36	445970.ALIPUT_01221	99.8	1e-20	DNA-templated transcription, initiation	N/A
COG	UHGV-0213153_36	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-0213153_36	NF007410	N/A	N/A	N/A	N/A
PHROG	UHGV-0213153_37	phrog_9804	155.4	0	N/A	unknown function
UniRef90	UHGV-0213153_37	UniRef90_A0A3D1LDS2	177.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0213153_37	1121344.JHZO01000003_gene981	168.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0213153_37	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0213153_37	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0213153_38	phrog_16304	64.1	1.8e-18	N/A	unknown function
UniRef90	UHGV-0213153_38	UniRef90_UPI001959E913	117.0	2.97e-29	N/A	N/A
eggNOG-mapper	UHGV-0213153_38	1121344.JHZO01000003_gene982	94.7	6.91e-21	N/A	N/A
Pfam	UHGV-0213153_38	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0213153_38	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0213153_39	K07451	45.1	0.0000000000017	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0213153_39	phrog_119	59.5	5.4e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0213153_39	UniRef90_G5SMF8	104.0	1.68e-25	HNH endonuclease domain protein	N/A
eggNOG-mapper	UHGV-0213153_39	762968.HMPREF9441_00533	104.0	2.82e-26	HNH endonuclease	N/A
Pfam	UHGV-0213153_39	PF19808	N/A	N/A	N/A	DUF6291
Pfam	UHGV-0213153_39	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0213153_39	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0213153_39	PF19808,TIGR02646	N/A	N/A	N/A	N/A
KOfam	UHGV-0213153_40	K01160	47.5	0.00000000000048	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0213153_40	phrog_4632	63.2	3.1e-19	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0213153_40	UniRef90_A0A7X8IB41	151.0	4.2039e-45	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0213153_40	469604.HMPREF0946_00819	63.5	0.0000000000312	N/A	N/A
structural_annotation	UHGV-0213153_40	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0213153_41	K03111	137.5	1.4e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0213153_41	phrog_44	146.7	1.20512e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0213153_41	UniRef90_UPI001C118A83	176.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0213153_41	693746.OBV_12860	164.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0213153_41	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0213153_41	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0213153_41	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0213153_41	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0213153_41	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0213153_42	K07455	299.5	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0213153_42	phrog_148	276.1	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0213153_42	UniRef90_U2SBP2	375.0	0	Recombination and repair protein RecT	N/A
eggNOG-mapper	UHGV-0213153_42	1226322.HMPREF1545_00015	375.0	0	RecT family	N/A
Pfam	UHGV-0213153_42	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0213153_42	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0213153_42	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0213153_42	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0213153_44	phrog_434	304.3	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0213153_44	UniRef90_A0A3D3XZF3	279.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0213153_44	1121344.JHZO01000003_gene985	276.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0213153_44	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0213153_44	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0213153_44	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0213153_44	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0213153_47	PF18129,PF08962,MF_00613,NF002745	N/A	N/A	N/A	N/A
PHROG	UHGV-0213153_49	phrog_8	43.2	0.0000000000085	transcriptional regulator	transcription regulation
UniRef90	UHGV-0213153_49	UniRef90_UPI00189EC4E5	49.3	0.00000248	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0213153_49	397291.C804_05804	49.7	0.000000935	TRANSCRIPTIONal	N/A
Pfam	UHGV-0213153_49	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0213153_49	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0213153_49	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0213153_50	phrog_585	105.1	5.4e-31	N/A	unknown function
UniRef90	UHGV-0213153_50	UniRef90_UPI00129D2984	123.0	8.89e-34	N/A	N/A
eggNOG-mapper	UHGV-0213153_50	526218.Sterm_0828	107.0	2.47e-28	N/A	N/A
Pfam	UHGV-0213153_50	PF10711	N/A	N/A	N/A	DUF2513
structural_annotation	UHGV-0213153_50	PF10711,TIGR04176,COG1695	N/A	N/A	N/A	N/A
UniRef90	UHGV-0213153_52	UniRef90_UPI001D0E690A	92.4	2.73e-23	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0213153_52	596329.HMPREF0631_1345	60.8	0.0000000000158	N/A	N/A
structural_annotation	UHGV-0213153_52	PF05339,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0213153_53	K22300	72.4	8.4e-21	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0213153_53	phrog_8	60.6	3.7e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0213153_53	UniRef90_K1TCM8	115.0	4.55e-31	Protein containing Helix-turn-helix type 3 domain protein	N/A
eggNOG-mapper	UHGV-0213153_53	866775.HMPREF9243_2022	63.2	0.000000000355	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0213153_53	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0213153_53	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0213153_53	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0213153_54	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0213153_55	K06400	391.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0213153_55	phrog_95	378.5	0	integrase	integration and excision
UniRef90	UHGV-0213153_55	UniRef90_UPI00164E9A6A	501.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0213153_55	718252.FP2_29980	364.0	0	N/A	N/A
Pfam	UHGV-0213153_55	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0213153_55	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0213153_55	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0213153_55	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0213153_55	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0213153	Yes	32,778	52	74	1
UHGV-0181254	No	19,787	52	44	1