vOTU vOTU-029469

vOTU: vOTU-029469

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-029469
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00025 → vSUBFAM-00630 → vGENUS-03363 → vOTU-029469
Host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660 → UBA6448 → UBA6448 sp000437315
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1463050
Biosample ID	SAMEA1906436
Genome length (bp)	22,592 bps
CheckV completeness	61.79% (Medium-quality)
CDS count	51
CDS density	93.66%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660 → UBA6448 → UBA6448 sp000437315	Total connections	39	Host agreement	84.62
PHIST-predicted host lineage	Bacteria → Firmicutes	Total connections	6	Host agreement	66.67

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 61.79)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1463050_2	phrog_541	88.7	5.3e-26	head-tail adaptor	connector
UniRef90	UHGV-1463050_2	UniRef90_A0A371AQT0	77.8	6.73e-16	N/A	N/A
eggNOG-mapper	UHGV-1463050_2	1449050.JNLE01000003_gene3888	65.5	0.00000000000666	N/A	N/A
PHROG	UHGV-1463050_4	phrog_422	207.7	0	major head protein	head and packaging
UniRef90	UHGV-1463050_4	UniRef90_W0U896	221.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1463050_4	1160721.RBI_II00538	221.0	0	N/A	N/A
structural_annotation	UHGV-1463050_4	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1463050_5	phrog_194	47.6	0.00000000000033	head scaffolding protein	head and packaging
UniRef90	UHGV-1463050_5	UniRef90_UPI000360E95E	82.8	2.02e-16	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1463050_5	536233.CLO_0885	75.9	0.0000000000000139	Phage minor structural protein GP20	N/A
Pfam	UHGV-1463050_5	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1463050_5	PF06810,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-1463050_8	phrog_581	231.8	0	minor head protein	head and packaging
UniRef90	UHGV-1463050_8	UniRef90_R5XZV2	234.0	0	Protein gp4	N/A
eggNOG-mapper	UHGV-1463050_8	642492.Clole_0816	161.0	6.82012e-42	N/A	N/A
Pfam	UHGV-1463050_8	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1463050_8	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1463050_8	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1463050_9	phrog_533	264.3	0	portal protein	head and packaging
UniRef90	UHGV-1463050_9	UniRef90_R6Y8H1	473.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1463050_9	545697.HMPREF0216_02845	317.0	0	N/A	N/A
Pfam	UHGV-1463050_9	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1463050_9	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1463050_10	K06909	194.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1463050_10	phrog_10250	106.0	2.2e-31	N/A	unknown function
UniRef90	UHGV-1463050_10	UniRef90_A0A3B8SL24	715.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1463050_10	428127.EUBDOL_01229	514.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1463050_10	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-1463050_10	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1463050_10	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1463050_10	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-1463050_11	UniRef90_A0A353JAA0	121.0	1.02e-31	Terminase_3 domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-1463050_11	428125.CLOLEP_01805	97.8	3.03e-24	N/A	N/A
Pfam	UHGV-1463050_11	PF13518	N/A	N/A	Helix-turn-helix domain	HTH_28
structural_annotation	UHGV-1463050_12	PF10922	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1463050_14	PF15456	N/A	N/A	N/A	N/A
PHROG	UHGV-1463050_15	phrog_7839	77.8	1.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-1463050_15	202954.BBNK01000034_gene3794	130.0	2.15e-37	N/A	N/A
PHROG	UHGV-1463050_17	phrog_918	112.5	1.6e-33	N/A	unknown function
UniRef90	UHGV-1463050_17	UniRef90_UPI0013775FB5	122.0	8.9e-35	N/A	N/A
eggNOG-mapper	UHGV-1463050_17	1504823.CCMM01000008_gene1021	119.0	3.83e-34	N/A	N/A
Pfam	UHGV-1463050_17	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1463050_17	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-1463050_19	phrog_625	74.0	1.6e-21	N/A	unknown function
UniRef90	UHGV-1463050_19	UniRef90_A0A373D1H8	124.0	1.08e-34	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1463050_19	1235800.C819_02245	101.0	2.67e-26	N/A	N/A
structural_annotation	UHGV-1463050_19	PF12961	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1463050_21	PF17340	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1463050_23	PF11680	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1463050_25	1163671.JAGI01000002_gene1275	50.4	0.0000011	N/A	N/A
PHROG	UHGV-1463050_30	phrog_803	57.7	2.3e-16	host nuclease inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1463050_30	UniRef90_R7IG32	59.3	0.000000000306	Orf31	N/A
eggNOG-mapper	UHGV-1463050_30	1229517.AMFD01000018_gene199	45.8	0.00000819	N/A	N/A
structural_annotation	UHGV-1463050_31	PF02559,MF_01194,TIGR02097	N/A	N/A	N/A	N/A
PHROG	UHGV-1463050_33	phrog_1891	212.6	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1463050_33	UniRef90_R7FAF4	148.0	1.27995e-41	N/A	N/A
eggNOG-mapper	UHGV-1463050_33	293826.Amet_2599	139.0	3.62e-38	HNH endonuclease	N/A
Pfam	UHGV-1463050_33	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1463050_33	PF13392	N/A	N/A	N/A	N/A
PHROG	UHGV-1463050_34	phrog_2044	77.3	1.4e-22	RNA polymerase beta subunit	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1463050_34	796940.HMPREF9628_00162	66.6	0.000000000000151	N/A	N/A
structural_annotation	UHGV-1463050_34	MF_00337,NF010671,COG1722	N/A	N/A	N/A	N/A
PHROG	UHGV-1463050_36	phrog_478	115.8	2.2e-34	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-1463050_36	UniRef90_A0A376GT60	94.0	3.95e-22	Prophage pi1 protein 29	N/A
eggNOG-mapper	UHGV-1463050_36	1123302.KB904167_gene507	94.7	3.31e-23	N/A	N/A
PHROG	UHGV-1463050_39	phrog_72	46.8	0.00000000000047	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1463050_39	1408437.JNJN01000039_gene370	53.5	0.00000121	N/A	N/A
structural_annotation	UHGV-1463050_39	PF05772,NF007281	N/A	N/A	N/A	N/A
KOfam	UHGV-1463050_40	K03111	113.5	3.3e-33	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1463050_40	phrog_44	116.4	2.7e-34	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1463050_40	UniRef90_A0A350H2L8	107.0	3.96e-27	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1463050_40	1397699.JNIS01000001_gene1537	97.4	1.61e-23	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1463050_40	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1463050_40	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1463050_40	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1463050_40	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1463050_40	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1463050_42	phrog_434	96.6	2.7e-28	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1463050_42	UniRef90_A0A350H2L7	327.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-1463050_42	1122146.AUHP01000010_gene1042	202.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-1463050_42	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
COG	UHGV-1463050_42	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1463050_42	PF10926,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-1463050_43	phrog_155	59.9	4.7e-17	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1463050_43	UniRef90_UPI000F63F93F	100.0	2.84e-23	ERF family protein	N/A
eggNOG-mapper	UHGV-1463050_43	1415775.U729_2586	88.6	4.9e-19	ERF superfamily	N/A
Pfam	UHGV-1463050_43	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1463050_43	PF04404,COG4712	N/A	N/A	N/A	N/A
KOfam	UHGV-1463050_45	K03111	57.4	4e-16	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1463050_45	phrog_44	57.0	5.7e-16	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1463050_45	UniRef90_A0A847E283	110.0	3.57e-29	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1463050_45	406124.ACPC01000020_gene3960	79.0	9.63e-17	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1463050_45	PF00436	N/A	N/A	Single-strand binding protein family	SSB
COG	UHGV-1463050_45	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1463050_45	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1463050_46	PF11417,PF08209	N/A	N/A	N/A	N/A
KOfam	UHGV-1463050_47	K02086	46.8	0.00000000000036	dnaD; DNA replication protein	N/A
PHROG	UHGV-1463050_47	phrog_4016	52.5	0.0000000000000098	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1463050_47	UniRef90_R5A158	90.1	6.05e-18	DnaD domain protein	N/A
eggNOG-mapper	UHGV-1463050_47	1123299.AUKZ01000018_gene209	58.2	0.000000248	Replication initiation and membrane attachment	N/A
Pfam	UHGV-1463050_47	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-1463050_47	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-1463050_47	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1463050_47	PF19808,PF07261,TIGR01446,COG3935	N/A	N/A	N/A	N/A
Pfam	UHGV-1463050_48	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1463050_50	PF11372	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1463050	Yes	22,592	27	62	1
UHGV-0184661	No	21,270	27	58	1