vOTU vOTU-029591

vOTU: vOTU-029591

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-029591
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508 → CAG-452
Taxonomy (UHGV)	vFAM-00026 → vSUBFAM-00425 → vOTU-029591
Host lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508 → CAG-452
Host range breadth	Genus
Lifestyle	temperate (Evidence: geNomad)

Representative genome
Genome ID	UHGV-0186260
Biosample ID	N/A
Genome length (bp)	29,408 bps
CheckV completeness	85.87% (Medium-quality)
CDS count	47
CDS density	92.58%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508 → CAG-452	Total connections	58	Host agreement	72.41
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508 → CAG-452	Total connections	15	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 85.87)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0186260_1	K03111	131.5	9.5e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0186260_1	phrog_44	139.0	2.89999e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0186260_1	UniRef90_R6XT61	207.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0186260_1	398512.JQKC01000002_gene1869	171.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0186260_1	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0186260_1	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0186260_1	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0186260_1	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0186260_1	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0186260_2	phrog_72	65.7	8.4e-19	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0186260_2	445972.ANACOL_00148	62.4	0.000000000545	N/A	N/A
Pfam	UHGV-0186260_2	PF05772	N/A	N/A	NinB protein	NinB
structural_annotation	UHGV-0186260_2	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0186260_3	phrog_7566	41.8	0.000000000018	N/A	unknown function
PHROG	UHGV-0186260_5	phrog_16304	167.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0186260_5	445972.ANACOL_03338	76.3	0.000000000000104	DnaD domain protein	N/A
Pfam	UHGV-0186260_5	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0186260_5	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0186260_5	PF19808,PF07261,TIGR01446,COG3935	N/A	N/A	N/A	N/A
PHROG	UHGV-0186260_6	phrog_1123	46.2	0.00000000000066	N/A	unknown function
UniRef90	UHGV-0186260_6	UniRef90_A0A357WV62	68.6	0.000000000000722	DNA gyrase	N/A
eggNOG-mapper	UHGV-0186260_6	445972.ANACOL_03346	60.8	0.00000000011	N/A	N/A
structural_annotation	UHGV-0186260_6	PF02002,TIGR03433,COG1695	N/A	N/A	N/A	N/A
KOfam	UHGV-0186260_8	K00571	108.9	5.7e-32	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0186260_8	phrog_67	104.6	6.5e-32	DNA methyltransferase	other
UniRef90	UHGV-0186260_8	UniRef90_UPI001BA5F7AD	379.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0186260_8	1123315.AUIP01000014_gene1936	372.0	0	DNA modification methylase DNA replication, recombination, and repair	N/A
PADLOC	UHGV-0186260_8	MTase_II_00157	94.0	3.2e-28	Type II methyltransferase	RM
Pfam	UHGV-0186260_8	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0186260_8	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0186260_8	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0186260_10	1250232.JQNJ01000001_gene2876	65.9	0.00000000452	Leucine rich repeats (6 copies)	N/A
COG	UHGV-0186260_10	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
structural_annotation	UHGV-0186260_10	NF007410	N/A	N/A	N/A	N/A
PHROG	UHGV-0186260_12	phrog_26165	46.5	0.00000000000042	N/A	unknown function
structural_annotation	UHGV-0186260_17	TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0186260_20	phrog_10772	40.3	0.000000000048	N/A	unknown function
UniRef90	UHGV-0186260_20	UniRef90_U2K339	95.9	2.78e-24	TM2 domain protein	N/A
eggNOG-mapper	UHGV-0186260_20	411473.RUMCAL_03485	95.9	4.66e-25	TM2 domain	N/A
Pfam	UHGV-0186260_20	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-0186260_20	COG2314	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0186260_20	PF05154,COG2314	N/A	N/A	N/A	N/A
PHROG	UHGV-0186260_22	phrog_144	65.0	1.3e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0186260_22	UniRef90_A0A1Q6M1V2	210.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-0186260_22	1414720.CBYM010000002_gene577	149.0	5.60519e-45	HNH nucleases	N/A
UniRef90	UHGV-0186260_25	UniRef90_A0A1C6JNN5	174.0	0	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0186260_25	397288.C806_00077	167.0	0	N/A	N/A
structural_annotation	UHGV-0186260_25	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0186260_26	phrog_9	312.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0186260_26	UniRef90_A0A1Q6M1W9	1042.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0186260_26	397288.C806_00076	817.0	0	Phage Terminase	N/A
Pfam	UHGV-0186260_26	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0186260_26	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0186260_26	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0186260_26	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0186260_27	phrog_12	162.7	0	portal protein	head and packaging
UniRef90	UHGV-0186260_27	UniRef90_A0A1Q6M1W2	561.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0186260_27	1399942.U3PFW0_9CAUD	377.0	0	Phage portal protein	N/A
Pfam	UHGV-0186260_27	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0186260_27	TIGR01537.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0186260_27	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0186260_28	K01358	98.7	8.1e-29	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0186260_28	phrog_94	175.3	0	head maturation protease	head and packaging
UniRef90	UHGV-0186260_28	UniRef90_A0A1Q6M1U6	382.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0186260_28	536232.CLM_2055	165.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0186260_28	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0186260_28	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0186260_28	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0186260_29	phrog_10	188.5	0	major head protein	head and packaging
UniRef90	UHGV-0186260_29	UniRef90_A0A1U7M5C2	357.0	0	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-0186260_29	397288.C806_00073	340.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0186260_29	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0186260_29	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0186260_29	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0186260_29	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0186260_30	phrog_40	40.1	0.000000000054	head-tail adaptor Ad1	connector
UniRef90	UHGV-0186260_30	UniRef90_A0A6P1MNU9	100.0	2.12e-25	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0186260_30	508419.F8J164_9CAUD	92.8	2.89e-23	N/A	N/A
NCBIFam	UHGV-0186260_30	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0186260_30	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0186260_31	phrog_25	42.2	0.000000000013	head closure Hc1	connector
UniRef90	UHGV-0186260_31	UniRef90_F8J165	126.0	2.72e-35	Putative head-tail adaptor	N/A
eggNOG-mapper	UHGV-0186260_31	508419.F8J165_9CAUD	126.0	4.57e-36	Phage head-tail joining protein	N/A
Pfam	UHGV-0186260_31	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-0186260_31	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0186260_32	508419.F8J166_9CAUD	77.4	3.75e-16	N/A	N/A
Pfam	UHGV-0186260_32	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0186260_32	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0186260_33	phrog_78	70.4	2.8e-20	tail terminator	connector
UniRef90	UHGV-0186260_33	UniRef90_UPI000C079ECC	53.5	0.000000879	N/A	N/A
eggNOG-mapper	UHGV-0186260_33	1399942.U3PDS3_9CAUD	83.2	3.98e-19	N/A	N/A
structural_annotation	UHGV-0186260_33	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0186260_34	phrog_88	81.1	1.4e-23	major tail protein	tail
UniRef90	UHGV-0186260_34	UniRef90_R6GFP9	144.0	3.9e-40	Putative major tail protein	N/A
eggNOG-mapper	UHGV-0186260_34	1399942.U3PBH4_9CAUD	117.0	2.59e-30	N/A	N/A
structural_annotation	UHGV-0186260_34	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0186260_36	phrog_2115	46.2	0.00000000000096	tail protein	tail
eggNOG-mapper	UHGV-0186260_36	1399942.U3PCS7_9CAUD	103.0	4.38e-27	N/A	N/A
structural_annotation	UHGV-0186260_36	PF11836	N/A	N/A	N/A	N/A
UniRef90	UHGV-0186260_38	UniRef90_UPI0018CD8BA0	50.1	0.000000497	Com family DNA-binding transcriptional regulator	N/A
eggNOG-mapper	UHGV-0186260_38	1540257.JQMW01000013_gene732	48.1	0.000000442	Mu-like prophage protein Com	N/A
PHROG	UHGV-0186260_39	phrog_6900	250.3	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0186260_39	536233.CLO_1577	315.0	0	tape measure	N/A
COG	UHGV-0186260_39	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0186260_39	PF05537,MF_04138,COG5281	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0186260_40	508419.F8J171_9CAUD	100.0	7.28e-21	Phage tail protein	N/A
Pfam	UHGV-0186260_40	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-0186260_40	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
structural_annotation	UHGV-0186260_40	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0186260_41	phrog_1067	293.7	0	minor head protein	head and packaging
UniRef90	UHGV-0186260_41	UniRef90_UPI00135C2B79	473.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0186260_41	1399942.U3PFX4_9CAUD	280.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-0186260_41	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0186260_41	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
PHROG	UHGV-0186260_42	phrog_13632	53.1	0.0000000000000067	N/A	unknown function
PHROG	UHGV-0186260_43	phrog_1794	42.9	0.0000000000085	amidase	lysis
UniRef90	UHGV-0186260_43	UniRef90_R7F968	469.0	0	Peptidoglycan-binding domain 1 protein	N/A
eggNOG-mapper	UHGV-0186260_43	1121422.AUMW01000009_gene3264	98.6	1.45e-20	Papain-like cysteine protease AvrRpt2	N/A
Pfam	UHGV-0186260_43	PF13529	N/A	N/A	Peptidase_C39 like family	Peptidase_C39_2
Pfam	UHGV-0186260_43	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0186260_43	COG0768	N/A	N/A	Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2)	N/A
structural_annotation	UHGV-0186260_43	PF03412,PF08239,NF040678,COG3807,COG3271	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0186260	Yes	29,408	30	86	1
UHGV-0068503	No	22,487	30	66	1