vOTU vOTU-029759

vOTU: vOTU-029759

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-029759
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 → vOTU-029759
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Eubacterium_G → Eubacterium_G ventriosum
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0353468
Biosample ID	N/A
Genome length (bp)	33,020 bps
CheckV completeness	85.30% (Medium-quality)
CDS count	44
CDS density	96.08%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Eubacterium_G → Eubacterium_G ventriosum	Total connections	67	Host agreement	91.04
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 85.3)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0353468_1	K03111	120.6	2.1e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0353468_1	phrog_44	119.8	2.6e-35	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0353468_1	UniRef90_R6FJ83	153.0	2.8026e-45	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0353468_1	411463.EUBVEN_00539	152.0	1.4013e-45	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0353468_1	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0353468_1	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0353468_1	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0353468_1	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0353468_1	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0353468_2	phrog_72	52.9	0.0000000000000069	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0353468_2	1304866.K413DRAFT_1197	84.0	2.73e-18	N/A	N/A
structural_annotation	UHGV-0353468_2	PF05772,NF007281	N/A	N/A	N/A	N/A
KOfam	UHGV-0353468_3	K01160	45.8	0.0000000000015	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0353468_3	phrog_1682	73.6	3.1e-21	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0353468_3	UniRef90_R7FGZ0	145.0	6.41795e-43	Gp63	N/A
eggNOG-mapper	UHGV-0353468_3	428125.CLOLEP_01819	99.4	3.06e-25	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-0353468_3	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0353468_3	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0353468_4	phrog_8489	242.4	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0353468_4	UniRef90_A0A6A4UXR4	225.0	0	Phage replication initiation	N/A
eggNOG-mapper	UHGV-0353468_4	1139219.I569_00860	178.0	0	DnaD domain protein	N/A
COG	UHGV-0353468_4	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0353468_4	PF09681,TIGR01714	N/A	N/A	N/A	N/A
PHROG	UHGV-0353468_5	phrog_5070	126.2	1.5e-37	N/A	unknown function
UniRef90	UHGV-0353468_5	UniRef90_C6L9Y5	108.0	2.15e-26	Bacterial transferase hexapeptide repeat protein	N/A
eggNOG-mapper	UHGV-0353468_5	478749.BRYFOR_05427	108.0	3.6e-27	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	N/A
COG	UHGV-0353468_5	COG1044	N/A	N/A	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	N/A
PHROG	UHGV-0353468_8	phrog_17690	94.5	6.9e-28	N/A	unknown function
UniRef90	UHGV-0353468_8	UniRef90_A0A6L5XWF4	75.5	0.00000000000000607	3-dehydroquinate synthase	N/A
eggNOG-mapper	UHGV-0353468_8	33035.JPJF01000123_gene2433	88.6	8.28e-21	N/A	N/A
structural_annotation	UHGV-0353468_9	PF04936	N/A	N/A	N/A	N/A
KOfam	UHGV-0353468_10	K00558	142.6	1.99965e-42	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0353468_10	phrog_116	154.2	0	DNA methyltransferase	other
UniRef90	UHGV-0353468_10	UniRef90_A0A371JBS1	322.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0353468_10	397290.C810_05213	246.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0353468_10	MTase_II_00174	154.2	0	Type II methyltransferase	RM
Pfam	UHGV-0353468_10	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0353468_10	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0353468_10	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0353468_10	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0353468_11	phrog_15198	52.0	0.0000000000000072	N/A	unknown function
eggNOG-mapper	UHGV-0353468_11	1235793.C809_02213	153.0	1.93379e-43	N/A	N/A
Pfam	UHGV-0353468_11	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0353468_13	phrog_986	72.7	4.1e-21	RNA-binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0353468_13	UniRef90_A0A3D4CBP5	93.6	2.96e-23	N/A	N/A
eggNOG-mapper	UHGV-0353468_13	1035191.HMPREF0185_00184	55.1	0.00000000809	N/A	N/A
Pfam	UHGV-0353468_13	PF12961	N/A	N/A	N/A	DUF3850
structural_annotation	UHGV-0353468_13	PF12961,MF_00684,NF003443,COG4043	N/A	N/A	N/A	N/A
UniRef90	UHGV-0353468_16	UniRef90_R5MSQ9	52.0	0.00000164	DNA-directed RNA polymerase specialized sigma subunit sigma24	N/A
structural_annotation	UHGV-0353468_16	PF06530,TIGR02937,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0353468_17	phrog_1129	86.5	1.6e-25	holin	lysis
UniRef90	UHGV-0353468_17	UniRef90_A0A8A2VWM7	86.3	3.88e-20	Phage holin family protein	N/A
eggNOG-mapper	UHGV-0353468_17	556261.HMPREF0240_01266	80.5	1.2e-18	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0353468_17	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0353468_17	PF16079	N/A	N/A	N/A	N/A
PHROG	UHGV-0353468_18	phrog_1863	65.4	5.3e-19	N/A	unknown function
eggNOG-mapper	UHGV-0353468_18	1203606.HMPREF1526_02027	77.0	9.73e-18	N/A	N/A
KOfam	UHGV-0353468_19	K07319	125.7	4.1e-37	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0353468_19	phrog_498	358.1	0	DNA methyltransferase	other
UniRef90	UHGV-0353468_19	UniRef90_UPI000B9881A1	516.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0353468_19	552398.HMPREF0866_01621	419.0	0	N/A	N/A
PADLOC	UHGV-0353468_19	MTase_II_00015	144.4	0	Type II methyltransferase	RM
Pfam	UHGV-0353468_19	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0353468_19	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0353468_19	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0353468_19	PF02195,PF01555,MF_02015,MF_00786,TIGR00180,NF008572,COG1475,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0353468_20	phrog_309	73.3	3.4e-21	terminase small subunit	head and packaging
UniRef90	UHGV-0353468_20	UniRef90_A0A3D0FZE1	88.6	1.4e-19	Transposase	N/A
eggNOG-mapper	UHGV-0353468_20	1033743.CAES01000078_gene3713	64.3	0.0000000000635	transposase activity	N/A
COG	UHGV-0353468_20	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0353468_20	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-0353468_21	K07273	207.2	0	acm; lysozyme	N/A
PHROG	UHGV-0353468_21	phrog_291	159.9	0	endolysin	lysis
UniRef90	UHGV-0353468_21	UniRef90_A0A416S3Y6	228.0	0	LysM peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0353468_21	33035.JPJF01000043_gene994	177.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0353468_21	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0353468_21	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0353468_21	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0353468_21	PF01183,MF_00152,NF008522,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0353468_22	phrog_4581	120.4	1.2e-35	terminase small subunit	head and packaging
UniRef90	UHGV-0353468_22	UniRef90_R5W1L1	323.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0353468_22	97138.C820_00619	188.0	0	HNH endonuclease	N/A
Pfam	UHGV-0353468_22	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0353468_22	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0353468_22	PF13671,MF_03171,NF005251,NF008448,COG4639	N/A	N/A	N/A	N/A
PHROG	UHGV-0353468_24	phrog_1066	56.2	5e-16	N/A	unknown function
eggNOG-mapper	UHGV-0353468_25	476272.RUMHYD_00002	125.0	2.19e-26	N/A	N/A
structural_annotation	UHGV-0353468_25	PF10651,PF20328	N/A	N/A	N/A	N/A
PHROG	UHGV-0353468_27	phrog_9	254.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0353468_27	UniRef90_R7A0H4	801.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0353468_27	1211817.CCAT010000007_gene1040	518.0	0	Terminase	N/A
Pfam	UHGV-0353468_27	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0353468_27	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0353468_27	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0353468_27	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0353468_28	phrog_12	147.7	6.44597e-44	portal protein	head and packaging
UniRef90	UHGV-0353468_28	UniRef90_A0A3R6X642	575.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0353468_28	1157490.EL26_20720	372.0	0	Phage portal protein	N/A
Pfam	UHGV-0353468_28	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0353468_28	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0353468_28	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0353468_29	K06904	125.5	5.5e-37	N/A	N/A
PHROG	UHGV-0353468_29	phrog_80	161.4	0	head maturation protease	head and packaging
UniRef90	UHGV-0353468_29	UniRef90_R5W1K4	276.0	0	Putative phage prohead protease	N/A
eggNOG-mapper	UHGV-0353468_29	1123263.AUKY01000046_gene468	211.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0353468_29	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0353468_29	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0353468_29	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0353468_29	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0353468_30	phrog_10	137.1	1.4e-40	major head protein	head and packaging
UniRef90	UHGV-0353468_30	UniRef90_A0A6N7SRR9	466.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0353468_30	1536769.P40081_01075	262.0	0	Phage capsid family	N/A
Pfam	UHGV-0353468_30	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0353468_30	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0353468_30	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0353468_30	PF05065,PF19962,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0353468_32	UniRef90_A0A843GGX3	66.6	0.000000000000933	Phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0353468_32	1196322.A370_05715	51.2	0.000000211	N/A	N/A
structural_annotation	UHGV-0353468_32	PF05135,TIGR01560	N/A	N/A	N/A	N/A
UniRef90	UHGV-0353468_33	UniRef90_A0A416HJI0	138.0	4.00001e-40	Head-tail adaptor protein	N/A
Pfam	UHGV-0353468_33	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0353468_33	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0353468_33	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0353468_34	TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0353468_35	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0353468_36	phrog_88	91.5	9.1e-27	major tail protein	tail
UniRef90	UHGV-0353468_36	UniRef90_A0A843GGC8	258.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0353468_36	545697.HMPREF0216_00917	58.5	0.0000000598	phage major tail protein	N/A
NCBIFam	UHGV-0353468_36	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0353468_36	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0353468_36	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
KOfam	UHGV-0353468_38	K20478	64.0	2.1e-20	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-0353468_38	phrog_5218	325.3	0	N/A	unknown function
UniRef90	UHGV-0353468_38	UniRef90_A0A1Y4GYF9	523.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0353468_38	999413.HMPREF1094_02001	423.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0353468_38	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0353468_38	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0353468_38	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0353468_39	phrog_36410	70.1	1.4e-20	N/A	unknown function
eggNOG-mapper	UHGV-0353468_39	574376.BAMA_21505	73.9	0.00000000000031	phage tail	N/A
Pfam	UHGV-0353468_39	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-0353468_39	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0353468_39	PF16774,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0353468_40	phrog_538	252.5	0	minor tail protein	tail
UniRef90	UHGV-0353468_40	UniRef90_UPI0004813F81	290.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0353468_40	768704.Desmer_4453	179.0	0	Siphovirus ReqiPepy6 Gp37-like protein	N/A
Pfam	UHGV-0353468_40	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0353468_40	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0353468_41	phrog_1220	158.7	0	head protein	head and packaging
UniRef90	UHGV-0353468_41	UniRef90_A0A061NY77	57.4	0.00000305	Structural protein	N/A
eggNOG-mapper	UHGV-0353468_41	536232.CLM_2920	113.0	1.91e-26	N/A	N/A
structural_annotation	UHGV-0353468_41	PF20747	N/A	N/A	N/A	N/A
UniRef90	UHGV-0353468_42	UniRef90_A0A1Q9J4Y8	80.1	2.92e-16	HTH cro/C1-type domain-containing protein	N/A
UniRef90	UHGV-0353468_44	UniRef90_A0A373VU48	133.0	3.37e-37	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0353468_44	140626.JHWB01000009_gene1336	54.3	0.0000000713	sequence-specific DNA binding	N/A
Pfam	UHGV-0353468_44	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0353468_44	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0353468	Yes	33,020	39	85	1
UHGV-0188378	No	18,771	40	49	1
UHGV-0209453	No	18,728	40	49	1